| Definition | Vibrio cholerae M66-2 chromosome I, complete genome. |
|---|---|
| Accession | NC_012578 |
| Length | 2,892,523 |
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The map label for this gene is cheV-1 [H]
Identifier: 227081755
GI number: 227081755
Start: 1663362
End: 1664348
Strand: Reverse
Name: cheV-1 [H]
Synonym: VCM66_1542
Alternate gene names: 227081755
Gene position: 1664348-1663362 (Counterclockwise)
Preceding gene: 227081756
Following gene: 227081754
Centisome position: 57.54
GC content: 45.19
Gene sequence:
>987_bases GTGACGATTATGAGCAACCCAAGCAGTACTATTTTGACTGAAAGCGGCACTAACGAGCTAGAAATCATTGAGTTTCATCT CGAAAAAGTGCTTCCCGATGGGCGGACCAAAACCTGTTATTACGGCATTAACGTTGCCAAGGTTCGTGAAGTTATTCGGG TTCCAGAGACGACTGACTATCCGAATGCCCAGCCACACATGATTGGGGTATTTTCTTCACGGGAAATTTTAACCCCCTTG GTGGATTTAGCCGGATGGCTCGGTGTGCCGACTTCAACGGATATCAGTAAGAAATACGTGATAGTCACCGACTTCAACCG TATGACGAATGGTTTCTTGATCGACAGTATCAGCCGTATTCATCGTATTTCGTGGAACGATGTGGAATCACCTAGCCAGT TCCTCGAAGCAGGTGAGCAAGATTGTGTGGTTGCGGTCGTTCGACAAGACAAAAAGCTCATCATGATCCTGGATTTTGAG AAGATCATTTCTGATATCAACCCTGAACTGAGTATGGAAAAATACGATGTGACGGTGGATAGAAAAGTCGACCTCAACCA GCGTATGGTGACCAAGCGTAATGCGAAAACCATTATGGTCGTTGATGACTCTGCCTTTATCCGAAGCTTAATCCAAGACA CATTGAGTTCAGCGGGTTACAACATTATTGCTTGTAAAGATGGTGGCGAGGCCCATGAAAAGCTGATGGAGCTCAAGCAA GCCGCAAAAGAGGAGAATGTGCCGGTTAGTGAGCTGATCGATGCCGTCGTCACGGACGTGGAAATGCCAAGAATGGATGG TATGCACCTTATTAAACGTTTACGTGATGATGATTCGTACTCCTCGATGCCTATAGTCATGTTCTCATCATTGATGAGTG ATGATAACCGTGCCAAAGCATTAGCACTTGGTGCTAATGATACGTTGACGAAACCTGAGATCGGTAAAATGGTCGCGATG ATGGATAAATATATCCTGAATATGTGA
Upstream 100 bases:
>100_bases ACAAAAAGGCATTGAGCTGATCAAAAACAGCGTCAATGAGAATGGTGTAACTCGTTATCAGGCAATACTGGACAAATATT GATAACCATCCCGAGAAGAT
Downstream 100 bases:
>100_bases GATGGGTGGAGCGTTGCTCCGCTTTTCTCAGGAGCGAGAATGTCGCCATCACTCATGTGTTCTACAGTAAAGAATAATCT GTATCTTGCTGGCAGATGAA
Product: chemotaxis protein CheV
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 328; Mature: 327
Protein sequence:
>328_residues MTIMSNPSSTILTESGTNELEIIEFHLEKVLPDGRTKTCYYGINVAKVREVIRVPETTDYPNAQPHMIGVFSSREILTPL VDLAGWLGVPTSTDISKKYVIVTDFNRMTNGFLIDSISRIHRISWNDVESPSQFLEAGEQDCVVAVVRQDKKLIMILDFE KIISDINPELSMEKYDVTVDRKVDLNQRMVTKRNAKTIMVVDDSAFIRSLIQDTLSSAGYNIIACKDGGEAHEKLMELKQ AAKEENVPVSELIDAVVTDVEMPRMDGMHLIKRLRDDDSYSSMPIVMFSSLMSDDNRAKALALGANDTLTKPEIGKMVAM MDKYILNM
Sequences:
>Translated_328_residues MTIMSNPSSTILTESGTNELEIIEFHLEKVLPDGRTKTCYYGINVAKVREVIRVPETTDYPNAQPHMIGVFSSREILTPL VDLAGWLGVPTSTDISKKYVIVTDFNRMTNGFLIDSISRIHRISWNDVESPSQFLEAGEQDCVVAVVRQDKKLIMILDFE KIISDINPELSMEKYDVTVDRKVDLNQRMVTKRNAKTIMVVDDSAFIRSLIQDTLSSAGYNIIACKDGGEAHEKLMELKQ AAKEENVPVSELIDAVVTDVEMPRMDGMHLIKRLRDDDSYSSMPIVMFSSLMSDDNRAKALALGANDTLTKPEIGKMVAM MDKYILNM >Mature_327_residues TIMSNPSSTILTESGTNELEIIEFHLEKVLPDGRTKTCYYGINVAKVREVIRVPETTDYPNAQPHMIGVFSSREILTPLV DLAGWLGVPTSTDISKKYVIVTDFNRMTNGFLIDSISRIHRISWNDVESPSQFLEAGEQDCVVAVVRQDKKLIMILDFEK IISDINPELSMEKYDVTVDRKVDLNQRMVTKRNAKTIMVVDDSAFIRSLIQDTLSSAGYNIIACKDGGEAHEKLMELKQA AKEENVPVSELIDAVVTDVEMPRMDGMHLIKRLRDDDSYSSMPIVMFSSLMSDDNRAKALALGANDTLTKPEIGKMVAMM DKYILNM
Specific function: Chemotaxis involves both a phosphorylation-dependent excitation and a methylation-dependent adaptation. CheV and CheW function together to couple CheA activation to methyl-accepting chemotaxis protein receptor status and possible CheA-dependent phosphoryl
COG id: COG0835
COG function: function code NT; Chemotaxis signal transduction protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002545 - InterPro: IPR011006 - InterPro: IPR001789 [H]
Pfam domain/function: PF01584 CheW; PF00072 Response_reg [H]
EC number: NA
Molecular weight: Translated: 36850; Mature: 36719
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: PS50851 CHEW ; PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 5.8 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 5.5 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIMSNPSSTILTESGTNELEIIEFHLEKVLPDGRTKTCYYGINVAKVREVIRVPETTDY CCCCCCCCCEEEECCCCCCEEHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHCCCCCCC PNAQPHMIGVFSSREILTPLVDLAGWLGVPTSTDISKKYVIVTDFNRMTNGFLIDSISRI CCCCCCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCHHHCCHHHHHHHHH HRISWNDVESPSQFLEAGEQDCVVAVVRQDKKLIMILDFEKIISDINPELSMEKYDVTVD HHCCCCCCCCHHHHHHCCCCCEEEEEEECCCCEEEEEEHHHHHHHCCCCCCCEEEEEEEC RKVDLNQRMVTKRNAKTIMVVDDSAFIRSLIQDTLSSAGYNIIACKDGGEAHEKLMELKQ CCCCCCHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHH AAKEENVPVSELIDAVVTDVEMPRMDGMHLIKRLRDDDSYSSMPIVMFSSLMSDDNRAKA HHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCEE LALGANDTLTKPEIGKMVAMMDKYILNM EEECCCCCCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure TIMSNPSSTILTESGTNELEIIEFHLEKVLPDGRTKTCYYGINVAKVREVIRVPETTDY CCCCCCCCEEEECCCCCCEEHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHCCCCCCC PNAQPHMIGVFSSREILTPLVDLAGWLGVPTSTDISKKYVIVTDFNRMTNGFLIDSISRI CCCCCCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCHHHCCHHHHHHHHH HRISWNDVESPSQFLEAGEQDCVVAVVRQDKKLIMILDFEKIISDINPELSMEKYDVTVD HHCCCCCCCCHHHHHHCCCCCEEEEEEECCCCEEEEEEHHHHHHHCCCCCCCEEEEEEEC RKVDLNQRMVTKRNAKTIMVVDDSAFIRSLIQDTLSSAGYNIIACKDGGEAHEKLMELKQ CCCCCCHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHH AAKEENVPVSELIDAVVTDVEMPRMDGMHLIKRLRDDDSYSSMPIVMFSSLMSDDNRAKA HHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCEE LALGANDTLTKPEIGKMVAMMDKYILNM EEECCCCCCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8169223; 9384377; 8169224 [H]