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The map label for this gene is 227081753

Identifier: 227081753

GI number: 227081753

Start: 1661623

End: 1662312

Strand: Reverse

Name: 227081753

Synonym: VCM66_1540

Alternate gene names: NA

Gene position: 1662312-1661623 (Counterclockwise)

Preceding gene: 227081754

Following gene: 227081750

Centisome position: 57.47

GC content: 42.75

Gene sequence:

>690_bases
ATGGTTGAAATTTTTATTGTCGTCATACTGTTAGTTCTGTTCTTTTTCGTGATTCAAAAATATGTCATTCGTCACGATGA
CACAAAGGACTATGCCTATAAAAAGAAAGGCCCACTACTGGATATGAAGGAAAGCGCTTTCTTTAACGCACTAGTGAGTG
CGGTTGGCGATCATGGCGTGGTCTTAGCGAAAGTGAATATGACCAATGTGATCACTCCAAGTAAAGTCGCGAACAAAAAG
CACTGGTTTATTGCTTATAACAAGATCTCAAAAAGCTACTTTGACTTTGTGGTGTGCGATGCAAGAACGCTTGAACCCAG
AGTCGTGCTCGAATTGGATGATGGGAAAGAGCTGCAAAAGGGCAAAGTAGAACGAGAAAAGTTGCTGCTGCACGTTTGTA
AATCGGCCAATATCCCATTGATTGGCACCAATATTCGCATGAGTTATCAAGTTGGCAAGTTAAGACGTTTACTCGCCGCG
CACATCGATTTAATTCAAACCGAGCAGGAAGTGCGTTTTTGTAAACGCTGCGGCAGTCCTATGGTGATTAAAGTTGCCAC
ACAAGGAGAATACCGTGGGAGACGATTCTTTACCTGTAGTCGACAACCACACTGTTCCTACACGGAGAATTACAACGTGG
TTTATGAATTTGAAGAAGAGGACAACGCCAGCAATCCCAGCGTTAATTAA

Upstream 100 bases:

>100_bases
ACCACTTTATTTTCCGCACAAAATCAGCAATAGAAACTGGTTTTTCAGTACAACATCAGTTATCAATGACACTAATTCTT
TTCTTTGGCTCAAATACTTT

Downstream 100 bases:

>100_bases
ACTCACACGTTCTCGGTTTGTTGATTAACCATAGTAGGATTGGTTGAGCCATGTCTGAATAGGCGAACCTGATTTCTTCC
CGCCTTTTTGGCTCGATACA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 229; Mature: 229

Protein sequence:

>229_residues
MVEIFIVVILLVLFFFVIQKYVIRHDDTKDYAYKKKGPLLDMKESAFFNALVSAVGDHGVVLAKVNMTNVITPSKVANKK
HWFIAYNKISKSYFDFVVCDARTLEPRVVLELDDGKELQKGKVEREKLLLHVCKSANIPLIGTNIRMSYQVGKLRRLLAA
HIDLIQTEQEVRFCKRCGSPMVIKVATQGEYRGRRFFTCSRQPHCSYTENYNVVYEFEEEDNASNPSVN

Sequences:

>Translated_229_residues
MVEIFIVVILLVLFFFVIQKYVIRHDDTKDYAYKKKGPLLDMKESAFFNALVSAVGDHGVVLAKVNMTNVITPSKVANKK
HWFIAYNKISKSYFDFVVCDARTLEPRVVLELDDGKELQKGKVEREKLLLHVCKSANIPLIGTNIRMSYQVGKLRRLLAA
HIDLIQTEQEVRFCKRCGSPMVIKVATQGEYRGRRFFTCSRQPHCSYTENYNVVYEFEEEDNASNPSVN
>Mature_229_residues
MVEIFIVVILLVLFFFVIQKYVIRHDDTKDYAYKKKGPLLDMKESAFFNALVSAVGDHGVVLAKVNMTNVITPSKVANKK
HWFIAYNKISKSYFDFVVCDARTLEPRVVLELDDGKELQKGKVEREKLLLHVCKSANIPLIGTNIRMSYQVGKLRRLLAA
HIDLIQTEQEVRFCKRCGSPMVIKVATQGEYRGRRFFTCSRQPHCSYTENYNVVYEFEEEDNASNPSVN

Specific function: Unknown

COG id: COG0551

COG function: function code L; Zn-finger domain associated with topoisomerase type I

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26351; Mature: 26351

Theoretical pI: Translated: 9.13; Mature: 9.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVEIFIVVILLVLFFFVIQKYVIRHDDTKDYAYKKKGPLLDMKESAFFNALVSAVGDHGV
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCE
VLAKVNMTNVITPSKVANKKHWFIAYNKISKSYFDFVVCDARTLEPRVVLELDDGKELQK
EEEEECCCCCCCCHHHCCCCEEEEEEECCCHHHHCEEEECCCCCCCEEEEEECCCCCHHH
GKVEREKLLLHVCKSANIPLIGTNIRMSYQVGKLRRLLAAHIDLIQTEQEVRFCKRCGSP
CHHHHHHHHHHHHHCCCCCEEECCEEEEEHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCC
MVIKVATQGEYRGRRFFTCSRQPHCSYTENYNVVYEFEEEDNASNPSVN
EEEEEECCCCCCCCEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCC
>Mature Secondary Structure
MVEIFIVVILLVLFFFVIQKYVIRHDDTKDYAYKKKGPLLDMKESAFFNALVSAVGDHGV
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCE
VLAKVNMTNVITPSKVANKKHWFIAYNKISKSYFDFVVCDARTLEPRVVLELDDGKELQK
EEEEECCCCCCCCHHHCCCCEEEEEEECCCHHHHCEEEECCCCCCCEEEEEECCCCCHHH
GKVEREKLLLHVCKSANIPLIGTNIRMSYQVGKLRRLLAAHIDLIQTEQEVRFCKRCGSP
CHHHHHHHHHHHHHCCCCCEEECCEEEEEHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCC
MVIKVATQGEYRGRRFFTCSRQPHCSYTENYNVVYEFEEEDNASNPSVN
EEEEEECCCCCCCCEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA