Click here to switch to the map view.

The map label for this gene is yqfB [C]

Identifier: 227081730

GI number: 227081730

Start: 1634771

End: 1635088

Strand: Reverse

Name: yqfB [C]

Synonym: VCM66_1516

Alternate gene names: 227081730

Gene position: 1635088-1634771 (Counterclockwise)

Preceding gene: 227081731

Following gene: 227081729

Centisome position: 56.53

GC content: 44.34

Gene sequence:

>318_bases
ATGTCCATCTCAACTCAAATTACCTTTTTTGAATTTTTGACCCCCTTGGTGGCCTCTGGCCAGAAGACCATCACCATCCG
TGATAAATCGGAGAGCCATTACGTGCCCGGCACTCGCGTTGAAGTGTTCACTTTAGAAACCCAGCGTAAAGTGTGTGAGA
TAGATATTCTGGCGGTTGAACCGCTCAAGTTTGATGAGATCAACGAGTTTCACGCTGAGCAAGAAGCGATAGAATTACCC
AAACTCAAGGCGTTGATCCAAGAGATTTACCCCAATATCGATGAGCTGTATGTCATTACTTATCAACTAGCGAAATAA

Upstream 100 bases:

>100_bases
TCGCTGATTCATCACACAAACAGCCTCGATAATCCCTTGACCTCATTAGGGGAATGCTTCATAAAGCACCCCTGATACGC
GATTTATCGAGGCTCTTAAT

Downstream 100 bases:

>100_bases
TCGAGCGCAAGAATTATGGTGAAATAAGCATGTCGAATACACACCAAGGCTTAAAAGCGGTCGCGATTTTAGAGTCGGCC
AAAGGGATTGTGTCGCTACT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 105; Mature: 104

Protein sequence:

>105_residues
MSISTQITFFEFLTPLVASGQKTITIRDKSESHYVPGTRVEVFTLETQRKVCEIDILAVEPLKFDEINEFHAEQEAIELP
KLKALIQEIYPNIDELYVITYQLAK

Sequences:

>Translated_105_residues
MSISTQITFFEFLTPLVASGQKTITIRDKSESHYVPGTRVEVFTLETQRKVCEIDILAVEPLKFDEINEFHAEQEAIELP
KLKALIQEIYPNIDELYVITYQLAK
>Mature_104_residues
SISTQITFFEFLTPLVASGQKTITIRDKSESHYVPGTRVEVFTLETQRKVCEIDILAVEPLKFDEINEFHAEQEAIELPK
LKALIQEIYPNIDELYVITYQLAK

Specific function: Unknown

COG id: COG3097

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0267 family [H]

Homologues:

Organism=Escherichia coli, GI1789267, Length=96, Percent_Identity=40.625, Blast_Score=77, Evalue=3e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007374
- InterPro:   IPR015947
- InterPro:   IPR008314 [H]

Pfam domain/function: PF04266 ASCH [H]

EC number: NA

Molecular weight: Translated: 12119; Mature: 11988

Theoretical pI: Translated: 4.45; Mature: 4.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSISTQITFFEFLTPLVASGQKTITIRDKSESHYVPGTRVEVFTLETQRKVCEIDILAVE
CCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCEEEEEEECCCCCEEEEEEEEEC
PLKFDEINEFHAEQEAIELPKLKALIQEIYPNIDELYVITYQLAK
CCCCCCCHHHHHHHHHHCCHHHHHHHHHHCCCCCCEEEEEEEECC
>Mature Secondary Structure 
SISTQITFFEFLTPLVASGQKTITIRDKSESHYVPGTRVEVFTLETQRKVCEIDILAVE
CCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCEEEEEEECCCCCEEEEEEEEEC
PLKFDEINEFHAEQEAIELPKLKALIQEIYPNIDELYVITYQLAK
CCCCCCCHHHHHHHHHHCCHHHHHHHHHHCCCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA