| Definition | Vibrio cholerae M66-2 chromosome I, complete genome. |
|---|---|
| Accession | NC_012578 |
| Length | 2,892,523 |
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The map label for this gene is bglA [H]
Identifier: 227081713
GI number: 227081713
Start: 1616995
End: 1618431
Strand: Reverse
Name: bglA [H]
Synonym: VCM66_1499
Alternate gene names: 227081713
Gene position: 1618431-1616995 (Counterclockwise)
Preceding gene: 227081716
Following gene: 227081712
Centisome position: 55.95
GC content: 47.53
Gene sequence:
>1437_bases ATGGCTAAGTCTATTTTTCCTAACGATTTTTTGTGGGGTGGTGCGGTAGCGGCGCATCAAGTGGAAGGCGGTTGGGATCA AGGTGGTAAAGGCGTGAGCATTGTTGATGTGCTGACTCGCGGTGCGCACGAAGTACCACGCCGTATTACCGATGGGGTTA TGGAAGGCGAATTTTACCCAAACCATCAAGCGGTCGATTTTTATCATCACTATAAAGAAGATATCGCGCTGTTTGCTGAG ATGGGCTTTAAGTGTTTCCGCACGTCTATTGCGTGGACACGAATCTTCCCGAATGGTGATGAAGCCGAGCCCAATGAGGC AGGATTACAGTTTTATGATGATCTGTTTGATGAGCTGTTAAAGCACAATATTGAACCTGTCATTACGTTGTCACATTTTG AAATGCCACTGCATCTAGTAAAGCAGTATGGCAGTTGGCTCAACCGCGACTTGATTGATCACTTCACCAAATTTGCGCAA GTCGTGATGACCCGTTACCAGCATAAGGTGAAATACTGGATCACCTTTAATGAAATCAATAACCAATGCAACTGGAAGCT GCCGATCTTTGGTTATTGCAACTCAGGTATGCTTTACGCTGAGCAAGACCGCCCAGAACAAGCCATGTACCAAGTGCTAC ATCACCAATTTATTGCCAGCGCATTAGTGGTGAAACTGGGGCACGAGATCAATCCGGATTTTAAAATTGGCAGCATGATC CATATGATGCCGCTGTATCCTGCCACCTCACGTCCGGAAGATGTGTTGTTGGCACAAGAGTTGATGCGTGAGAAATATCT GTTCAGTGACGTACAGGTTCGTGGCTATTACCCCAGTTATCTGCGCAAAGAATGGCAACGCAAAGGCATCGAAATTGAGA TGCAAGCTGGTGATGAGCAGATCCTGCGCCAAGGCTGCGCCGATTATCTCGCCATCAGCTACTACATGACCAACATTGTC TCTGCAGCGCCAGAACAAGAGGGCGAAACCACCTCTTTGTTTGAAACCAGCCGCTTAAACCCGTATCTTCCTGCGTCCGA TTGGGGATGGCAGATTGATCCACAAGGTTTACGTTATGCGCTTTCTGAGTTGTATGAGCGTTACCAAAAACCGATTTTTG TGGTAGAAAATGGCCTCGGCGCGCTAGACACCGTCGAAGCGGATGGTTCAATCAACGATGATTACCGAATTCGCTACCTC TCTGAGCATATCGCGGCAGTCAAACAAGCGATCGACTATGACGGTGTTGAAGTGATGGGTTACACCCCTTGGGGCTGTAT CGACTGTGTATCGTTCACCACTGGCGAGTACAAAAAACGCTACGGCTTTATCTATGTGGATAAACACGATGATGGCAGTG GCACCATGGCGCGCGCTAAGAAAAAGAGCTTCTACTGGTATCAACAAGTGATCGCCAGTAACGGTGAAAAGCTTTAA
Upstream 100 bases:
>100_bases GGTTTCAGAAACCGGTTACATTGTAAGGAAGTTTAAGTTATAGTGTCAGCAGTTTGAACTGGCTAACAATGAATTGCCAA TTTTGTGAGAGAGGTCATCT
Downstream 100 bases:
>100_bases ATCGTGTCGGCGGCCTTTGGGTCGCCGCTTAATTTTTGCGGACTCAGTTTGAAGGATTGTTGATGGCAACCATAAACGAT GTGTGTAAATTGGCGGGTGT
Product: 6-phospho-beta-glucosidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 478; Mature: 477
Protein sequence:
>478_residues MAKSIFPNDFLWGGAVAAHQVEGGWDQGGKGVSIVDVLTRGAHEVPRRITDGVMEGEFYPNHQAVDFYHHYKEDIALFAE MGFKCFRTSIAWTRIFPNGDEAEPNEAGLQFYDDLFDELLKHNIEPVITLSHFEMPLHLVKQYGSWLNRDLIDHFTKFAQ VVMTRYQHKVKYWITFNEINNQCNWKLPIFGYCNSGMLYAEQDRPEQAMYQVLHHQFIASALVVKLGHEINPDFKIGSMI HMMPLYPATSRPEDVLLAQELMREKYLFSDVQVRGYYPSYLRKEWQRKGIEIEMQAGDEQILRQGCADYLAISYYMTNIV SAAPEQEGETTSLFETSRLNPYLPASDWGWQIDPQGLRYALSELYERYQKPIFVVENGLGALDTVEADGSINDDYRIRYL SEHIAAVKQAIDYDGVEVMGYTPWGCIDCVSFTTGEYKKRYGFIYVDKHDDGSGTMARAKKKSFYWYQQVIASNGEKL
Sequences:
>Translated_478_residues MAKSIFPNDFLWGGAVAAHQVEGGWDQGGKGVSIVDVLTRGAHEVPRRITDGVMEGEFYPNHQAVDFYHHYKEDIALFAE MGFKCFRTSIAWTRIFPNGDEAEPNEAGLQFYDDLFDELLKHNIEPVITLSHFEMPLHLVKQYGSWLNRDLIDHFTKFAQ VVMTRYQHKVKYWITFNEINNQCNWKLPIFGYCNSGMLYAEQDRPEQAMYQVLHHQFIASALVVKLGHEINPDFKIGSMI HMMPLYPATSRPEDVLLAQELMREKYLFSDVQVRGYYPSYLRKEWQRKGIEIEMQAGDEQILRQGCADYLAISYYMTNIV SAAPEQEGETTSLFETSRLNPYLPASDWGWQIDPQGLRYALSELYERYQKPIFVVENGLGALDTVEADGSINDDYRIRYL SEHIAAVKQAIDYDGVEVMGYTPWGCIDCVSFTTGEYKKRYGFIYVDKHDDGSGTMARAKKKSFYWYQQVIASNGEKL >Mature_477_residues AKSIFPNDFLWGGAVAAHQVEGGWDQGGKGVSIVDVLTRGAHEVPRRITDGVMEGEFYPNHQAVDFYHHYKEDIALFAEM GFKCFRTSIAWTRIFPNGDEAEPNEAGLQFYDDLFDELLKHNIEPVITLSHFEMPLHLVKQYGSWLNRDLIDHFTKFAQV VMTRYQHKVKYWITFNEINNQCNWKLPIFGYCNSGMLYAEQDRPEQAMYQVLHHQFIASALVVKLGHEINPDFKIGSMIH MMPLYPATSRPEDVLLAQELMREKYLFSDVQVRGYYPSYLRKEWQRKGIEIEMQAGDEQILRQGCADYLAISYYMTNIVS AAPEQEGETTSLFETSRLNPYLPASDWGWQIDPQGLRYALSELYERYQKPIFVVENGLGALDTVEADGSINDDYRIRYLS EHIAAVKQAIDYDGVEVMGYTPWGCIDCVSFTTGEYKKRYGFIYVDKHDDGSGTMARAKKKSFYWYQQVIASNGEKL
Specific function: Unknown
COG id: COG2723
COG function: function code G; Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 1 family [H]
Homologues:
Organism=Homo sapiens, GI32481206, Length=503, Percent_Identity=29.6222664015905, Blast_Score=192, Evalue=8e-49, Organism=Homo sapiens, GI110681710, Length=497, Percent_Identity=30.1810865191147, Blast_Score=179, Evalue=6e-45, Organism=Homo sapiens, GI13273313, Length=492, Percent_Identity=27.6422764227642, Blast_Score=169, Evalue=4e-42, Organism=Homo sapiens, GI24497614, Length=490, Percent_Identity=28.5714285714286, Blast_Score=155, Evalue=6e-38, Organism=Homo sapiens, GI28376633, Length=484, Percent_Identity=28.9256198347107, Blast_Score=152, Evalue=8e-37, Organism=Escherichia coli, GI2367174, Length=478, Percent_Identity=69.8744769874477, Blast_Score=731, Evalue=0.0, Organism=Escherichia coli, GI1789070, Length=479, Percent_Identity=49.6868475991649, Blast_Score=501, Evalue=1e-143, Organism=Escherichia coli, GI2367270, Length=477, Percent_Identity=50.7337526205451, Blast_Score=471, Evalue=1e-134, Organism=Caenorhabditis elegans, GI17552856, Length=485, Percent_Identity=30.1030927835052, Blast_Score=190, Evalue=1e-48, Organism=Caenorhabditis elegans, GI17539390, Length=490, Percent_Identity=29.1836734693878, Blast_Score=178, Evalue=5e-45, Organism=Drosophila melanogaster, GI21356577, Length=500, Percent_Identity=28.8, Blast_Score=167, Evalue=1e-41,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001360 - InterPro: IPR018120 - InterPro: IPR017853 - InterPro: IPR013781 [H]
Pfam domain/function: PF00232 Glyco_hydro_1 [H]
EC number: =3.2.1.86 [H]
Molecular weight: Translated: 55157; Mature: 55026
Theoretical pI: Translated: 5.13; Mature: 5.13
Prosite motif: PS00572 GLYCOSYL_HYDROL_F1_1 ; PS00653 GLYCOSYL_HYDROL_F1_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKSIFPNDFLWGGAVAAHQVEGGWDQGGKGVSIVDVLTRGAHEVPRRITDGVMEGEFYP CCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHCCCCCC NHQAVDFYHHYKEDIALFAEMGFKCFRTSIAWTRIFPNGDEAEPNEAGLQFYDDLFDELL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCHHHHHHHHHHHHHHH KHNIEPVITLSHFEMPLHLVKQYGSWLNRDLIDHFTKFAQVVMTRYQHKVKYWITFNEIN HCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEEECCC NQCNWKLPIFGYCNSGMLYAEQDRPEQAMYQVLHHQFIASALVVKLGHEINPDFKIGSMI CCCCEEEEEEEECCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEE HMMPLYPATSRPEDVLLAQELMREKYLFSDVQVRGYYPSYLRKEWQRKGIEIEMQAGDEQ EEEECCCCCCCCHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHCCCEEEECCCHHH ILRQGCADYLAISYYMTNIVSAAPEQEGETTSLFETSRLNPYLPASDWGWQIDPQGLRYA HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCCCCCCEECHHHHHHH LSELYERYQKPIFVVENGLGALDTVEADGSINDDYRIRYLSEHIAAVKQAIDYDGVEVMG HHHHHHHHCCCEEEEECCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEE YTPWGCIDCVSFTTGEYKKRYGFIYVDKHDDGSGTMARAKKKSFYWYQQVIASNGEKL CCCCCHHHHHHCCCCCHHHHCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure AKSIFPNDFLWGGAVAAHQVEGGWDQGGKGVSIVDVLTRGAHEVPRRITDGVMEGEFYP CCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHCCCCCC NHQAVDFYHHYKEDIALFAEMGFKCFRTSIAWTRIFPNGDEAEPNEAGLQFYDDLFDELL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCHHHHHHHHHHHHHHH KHNIEPVITLSHFEMPLHLVKQYGSWLNRDLIDHFTKFAQVVMTRYQHKVKYWITFNEIN HCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEEECCC NQCNWKLPIFGYCNSGMLYAEQDRPEQAMYQVLHHQFIASALVVKLGHEINPDFKIGSMI CCCCEEEEEEEECCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEE HMMPLYPATSRPEDVLLAQELMREKYLFSDVQVRGYYPSYLRKEWQRKGIEIEMQAGDEQ EEEECCCCCCCCHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHCCCEEEECCCHHH ILRQGCADYLAISYYMTNIVSAAPEQEGETTSLFETSRLNPYLPASDWGWQIDPQGLRYA HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCCCCCCEECHHHHHHH LSELYERYQKPIFVVENGLGALDTVEADGSINDDYRIRYLSEHIAAVKQAIDYDGVEVMG HHHHHHHHCCCEEEEECCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEE YTPWGCIDCVSFTTGEYKKRYGFIYVDKHDDGSGTMARAKKKSFYWYQQVIASNGEKL CCCCCHHHHHHCCCCCHHHHCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]