| Definition | Vibrio cholerae M66-2 chromosome I, complete genome. |
|---|---|
| Accession | NC_012578 |
| Length | 2,892,523 |
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The map label for this gene is 227081703
Identifier: 227081703
GI number: 227081703
Start: 1607983
End: 1608741
Strand: Reverse
Name: 227081703
Synonym: VCM66_1489
Alternate gene names: NA
Gene position: 1608741-1607983 (Counterclockwise)
Preceding gene: 227081710
Following gene: 227081702
Centisome position: 55.62
GC content: 48.48
Gene sequence:
>759_bases ATGAAAAGATGTCTCTCACTTCTTTGCGTTTCGGCACTTTTGCCAGCGCATGCCGCTTCGCTCGATCAAGCGCAAGCGAT TCAAAACAGTACTAACCAAGCTTCTGCACAGAGCCAGCAAAAAATTGACCGCAGTGCCGAGCAGAGTTTGTTACTGCGTG CGGAAATCGAACAGTTGAACGAAGAAGTCAAAAATCTTCAGGTGTACCGTAATCACTTACAATCTTTGGTGGCCAATCAA CAGCAAGAGATGGCCAGTCTTGAACAGCAAACTGAAGAGATCAAACGCACGCGCCAAGGCATAGTTCCTTTGATGTATGA CATGATTGAAGGACTGGAGGAGTGGGTTGCGCAAGATAAACCGATTCGTCTTGCGGCACGTCAAGAACGCATTGAGAAAC TCAAAGAACTGATGCCTCGGGCAGATGTCAGTGATGCTGAAAAGTACCGTCGTATTCTCGAGGCATATCAGATTGAACTC GACTACGGCAATAAGCTTGGCACCTATCAAGCCAAAATCACTCTCCCTTCTGCACAAGAAGTGGAAGCGGATGTGCTCTA TTTAGGTCGTCTGTCGCTATTAGCACGCAGTTTGGATGGCGAGCAGTTCTGGACTTGGAATTCCAAGCAGAACGCATGGC AAGCAATCACGGATGCCAACAAAAGCGACCTCGCTGCCGCTTACCAATTGGCTCAGCAACAGATTGCGCCGACACTGTTG AACTTGCCTGTTTCGTTGACCGCTGCGGAGGCTAAATAA
Upstream 100 bases:
>100_bases TTAAAACGGTAGGAATGGAAAACAATGGTTGAACTTGGTTGATAATGAGAGCGTTTCTCAATAGAATCCCAACCATTCCT TAAACGGCTAATCACAACCC
Downstream 100 bases:
>100_bases TGACACTTAAAAAGACCACCTTAGCACTGGCATTAAGTCTGCCATTCGCCTTTGCAAGTGTTGCTAACGCATCAAATAGC CTCGTCCAACAAGCGACGCA
Product: hypothetical protein
Products: NA
Alternate protein names: Chromosome Segregation ATPase
Number of amino acids: Translated: 252; Mature: 252
Protein sequence:
>252_residues MKRCLSLLCVSALLPAHAASLDQAQAIQNSTNQASAQSQQKIDRSAEQSLLLRAEIEQLNEEVKNLQVYRNHLQSLVANQ QQEMASLEQQTEEIKRTRQGIVPLMYDMIEGLEEWVAQDKPIRLAARQERIEKLKELMPRADVSDAEKYRRILEAYQIEL DYGNKLGTYQAKITLPSAQEVEADVLYLGRLSLLARSLDGEQFWTWNSKQNAWQAITDANKSDLAAAYQLAQQQIAPTLL NLPVSLTAAEAK
Sequences:
>Translated_252_residues MKRCLSLLCVSALLPAHAASLDQAQAIQNSTNQASAQSQQKIDRSAEQSLLLRAEIEQLNEEVKNLQVYRNHLQSLVANQ QQEMASLEQQTEEIKRTRQGIVPLMYDMIEGLEEWVAQDKPIRLAARQERIEKLKELMPRADVSDAEKYRRILEAYQIEL DYGNKLGTYQAKITLPSAQEVEADVLYLGRLSLLARSLDGEQFWTWNSKQNAWQAITDANKSDLAAAYQLAQQQIAPTLL NLPVSLTAAEAK >Mature_252_residues MKRCLSLLCVSALLPAHAASLDQAQAIQNSTNQASAQSQQKIDRSAEQSLLLRAEIEQLNEEVKNLQVYRNHLQSLVANQ QQEMASLEQQTEEIKRTRQGIVPLMYDMIEGLEEWVAQDKPIRLAARQERIEKLKELMPRADVSDAEKYRRILEAYQIEL DYGNKLGTYQAKITLPSAQEVEADVLYLGRLSLLARSLDGEQFWTWNSKQNAWQAITDANKSDLAAAYQLAQQQIAPTLL NLPVSLTAAEAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28464; Mature: 28464
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRCLSLLCVSALLPAHAASLDQAQAIQNSTNQASAQSQQKIDRSAEQSLLLRAEIEQLN CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EEVKNLQVYRNHLQSLVANQQQEMASLEQQTEEIKRTRQGIVPLMYDMIEGLEEWVAQDK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCC PIRLAARQERIEKLKELMPRADVSDAEKYRRILEAYQIELDYGNKLGTYQAKITLPSAQE CHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCHHH VEADVLYLGRLSLLARSLDGEQFWTWNSKQNAWQAITDANKSDLAAAYQLAQQQIAPTLL HHHHHHHHHHHHHHHHHCCCCCEECCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH NLPVSLTAAEAK HCCCEEECCCCC >Mature Secondary Structure MKRCLSLLCVSALLPAHAASLDQAQAIQNSTNQASAQSQQKIDRSAEQSLLLRAEIEQLN CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EEVKNLQVYRNHLQSLVANQQQEMASLEQQTEEIKRTRQGIVPLMYDMIEGLEEWVAQDK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCC PIRLAARQERIEKLKELMPRADVSDAEKYRRILEAYQIELDYGNKLGTYQAKITLPSAQE CHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCHHH VEADVLYLGRLSLLARSLDGEQFWTWNSKQNAWQAITDANKSDLAAAYQLAQQQIAPTLL HHHHHHHHHHHHHHHHHCCCCCEECCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH NLPVSLTAAEAK HCCCEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA