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The map label for this gene is 227081674

Identifier: 227081674

GI number: 227081674

Start: 1576599

End: 1578260

Strand: Reverse

Name: 227081674

Synonym: VCM66_1458

Alternate gene names: NA

Gene position: 1578260-1576599 (Counterclockwise)

Preceding gene: 227081675

Following gene: 227081673

Centisome position: 54.56

GC content: 50.3

Gene sequence:

>1662_bases
ATGTTAAACAACCTACTACAACAAGCGACGTCTCCAAACGGTCGGGCGAGACAGTATGCGATTGAGCATACGGTTGAGTT
GACCAATCTTATTCCTCCTACCGTAAGTTACGAAAGTGGCGGCCATACCTTAATTATTGGACCCACTATGCTCATTGAGC
GTATTACCGAGCCACTGAGCAGTATGGCTTCAATCACGCTCCTTTCTGTGGATGGTGAGCCTGGCACACAAAGCAATTTG
TACTATGCCGATACGGTAGAAATCAGCGGTTTCCTCGGCGCCTTCTCGGTGAACGTAGAAAACCACGGTAAACGAGTCAA
TTTGGCGCAAGCCGCGATAGGTGGAAACAGCTTTGATATCGTATTGGATATGTCACTCAACGGTTTAATGAGTGAAGAAG
TACCTGTACCCGGTTATTTTCCAGTAGGACGCGGTTATCCAAAGCTGGCGGATGCGCTGGAAGAGATCCCAACTCTGATG
GGCACTTTCGATAAACCTAAGTATTTTCGCTTGGATCCCGATTTGTGCGCGCACAGTTCACGCGGTGTGAAAGGCTGTGA
ACGCTGTGTGGATGCATGTCCTGCTGGCGCACTGTCCAGTGAAGGTTCAGAGCAAACAGGGCATCGGATTCAAATTAACC
CTTACCTGTGTCAGGGCGTCGGAACCTGTGCGACCGCTTGCCCGACGGAAGCGATTCACTACGCGCTGCCTAATCCTACC
GATACGCAAAAATTTATTGAGCGATTACTGGCGAATTACCACCAAGCTGGCGGTGAAAAACCGATCGTGCTGATCTGCAG
TTCTCGACATGAAAGTTACAACGTCATGGCACTTAAGGTATTACCAGATAACGTGATTCCTGTGGTGGTAGAAGAGCTGC
CTTCTGTCGGTATCGACAGCTGGTTTGCTGCTTTAGTTAACGGTGCAACTCAAGTGTTGTTTGCCGCGAGCCGTCATATG
CCGCCCACTATCCAGCGTATTCTCAACCAAGAAATGAGCATGGCGCAGAGCTTGCTGACTCACTTGGGTTTGCCCAAAGA
GACGATTGATATTCTTTATCTCGAATCGCTACGCGAGGGGATGCCGGTACTGTGTGAACAGCCGCTTGGGCTTAAGTTGG
GTGACTTAATCGGTAATAAGCGCGAACGTCTGTTTACCGCGCTGGATGCGTTAGCAGAAACACTCAATGCACAACCTAGC
GTTCAACCACTCAGCATCAGCGCGCCTTACGGCACCATTGAATGCCAAACAAGCGATTGTACTTTGTGCATGAGCTGTGT
TGCGGTTTGCCCAACACGTGCACTGCATCTGGCTGGAGATAGCCCAGCACTACGCTTTATTGAACAAGACTGCGTGCAGT
GTGGCTTGTGTGTCAAAGCTTGCCCTGAACAAGTGCTTAGCGCTACACCACAACTCAACTGGAACAAAGCGGCACGCCAA
GGTGTGGTGACGTTGCATCAAGAAGAACCCGCTAAGTGCCTGCGCTGCCATAAACCTTTCGCACCACAGTCCATGATTAC
CATGTTGCAAACCAAGTTACGCGGTCACTCACATTTCGCCACGCCGGAAGCGCTCAATCGTATTGCGATGTGCGAAGACT
GCCGGGTAGTAGACATGTTTGAAGCCATGGCTCATGACCCTGAGCAGCAGCTCAAGTATTAA

Upstream 100 bases:

>100_bases
ATTCTCTGATTTTTCAATAAAATAAATTTGGAACGCTATTTGCTTTAGCTTATGTAAAACGAGCCAACACGCTCGTGATT
CTTATAAGCGGAAGCAAGCA

Downstream 100 bases:

>100_bases
GGAGAAAGCCATGCAAGAGCAATCTATGCGTTCACAGTCAACACATTCACAGTCAATGCGTTCAGACATTTACCTGCTGC
TCGCCACACTGCTGCGTGAT

Product: iron-sulfur cluster-binding protein

Products: NA

Alternate protein names: 4Fe-4S Ferredoxin; 4fe-4S Ferredoxin; Methyl-Viologen-Reducing Hydrogenase Delta Subunit; Polyferredoxins

Number of amino acids: Translated: 553; Mature: 553

Protein sequence:

>553_residues
MLNNLLQQATSPNGRARQYAIEHTVELTNLIPPTVSYESGGHTLIIGPTMLIERITEPLSSMASITLLSVDGEPGTQSNL
YYADTVEISGFLGAFSVNVENHGKRVNLAQAAIGGNSFDIVLDMSLNGLMSEEVPVPGYFPVGRGYPKLADALEEIPTLM
GTFDKPKYFRLDPDLCAHSSRGVKGCERCVDACPAGALSSEGSEQTGHRIQINPYLCQGVGTCATACPTEAIHYALPNPT
DTQKFIERLLANYHQAGGEKPIVLICSSRHESYNVMALKVLPDNVIPVVVEELPSVGIDSWFAALVNGATQVLFAASRHM
PPTIQRILNQEMSMAQSLLTHLGLPKETIDILYLESLREGMPVLCEQPLGLKLGDLIGNKRERLFTALDALAETLNAQPS
VQPLSISAPYGTIECQTSDCTLCMSCVAVCPTRALHLAGDSPALRFIEQDCVQCGLCVKACPEQVLSATPQLNWNKAARQ
GVVTLHQEEPAKCLRCHKPFAPQSMITMLQTKLRGHSHFATPEALNRIAMCEDCRVVDMFEAMAHDPEQQLKY

Sequences:

>Translated_553_residues
MLNNLLQQATSPNGRARQYAIEHTVELTNLIPPTVSYESGGHTLIIGPTMLIERITEPLSSMASITLLSVDGEPGTQSNL
YYADTVEISGFLGAFSVNVENHGKRVNLAQAAIGGNSFDIVLDMSLNGLMSEEVPVPGYFPVGRGYPKLADALEEIPTLM
GTFDKPKYFRLDPDLCAHSSRGVKGCERCVDACPAGALSSEGSEQTGHRIQINPYLCQGVGTCATACPTEAIHYALPNPT
DTQKFIERLLANYHQAGGEKPIVLICSSRHESYNVMALKVLPDNVIPVVVEELPSVGIDSWFAALVNGATQVLFAASRHM
PPTIQRILNQEMSMAQSLLTHLGLPKETIDILYLESLREGMPVLCEQPLGLKLGDLIGNKRERLFTALDALAETLNAQPS
VQPLSISAPYGTIECQTSDCTLCMSCVAVCPTRALHLAGDSPALRFIEQDCVQCGLCVKACPEQVLSATPQLNWNKAARQ
GVVTLHQEEPAKCLRCHKPFAPQSMITMLQTKLRGHSHFATPEALNRIAMCEDCRVVDMFEAMAHDPEQQLKY
>Mature_553_residues
MLNNLLQQATSPNGRARQYAIEHTVELTNLIPPTVSYESGGHTLIIGPTMLIERITEPLSSMASITLLSVDGEPGTQSNL
YYADTVEISGFLGAFSVNVENHGKRVNLAQAAIGGNSFDIVLDMSLNGLMSEEVPVPGYFPVGRGYPKLADALEEIPTLM
GTFDKPKYFRLDPDLCAHSSRGVKGCERCVDACPAGALSSEGSEQTGHRIQINPYLCQGVGTCATACPTEAIHYALPNPT
DTQKFIERLLANYHQAGGEKPIVLICSSRHESYNVMALKVLPDNVIPVVVEELPSVGIDSWFAALVNGATQVLFAASRHM
PPTIQRILNQEMSMAQSLLTHLGLPKETIDILYLESLREGMPVLCEQPLGLKLGDLIGNKRERLFTALDALAETLNAQPS
VQPLSISAPYGTIECQTSDCTLCMSCVAVCPTRALHLAGDSPALRFIEQDCVQCGLCVKACPEQVLSATPQLNWNKAARQ
GVVTLHQEEPAKCLRCHKPFAPQSMITMLQTKLRGHSHFATPEALNRIAMCEDCRVVDMFEAMAHDPEQQLKY

Specific function: Unknown

COG id: COG1145

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 60155; Mature: 60155

Theoretical pI: Translated: 5.31; Mature: 5.31

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
4.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNNLLQQATSPNGRARQYAIEHTVELTNLIPPTVSYESGGHTLIIGPTMLIERITEPLS
CHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCEECCCCCEEEECHHHHHHHHHHHHH
SMASITLLSVDGEPGTQSNLYYADTVEISGFLGAFSVNVENHGKRVNLAQAAIGGNSFDI
HHHEEEEEEECCCCCCCCCEEEEEEEEECEEEEEEEEEECCCCCEEEHHHHHCCCCCEEE
VLDMSLNGLMSEEVPVPGYFPVGRGYPKLADALEEIPTLMGTFDKPKYFRLDPDLCAHSS
EEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEECCHHHHCCCC
RGVKGCERCVDACPAGALSSEGSEQTGHRIQINPYLCQGVGTCATACPTEAIHYALPNPT
CCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECHHHHCCCCHHHHCCCHHHHEECCCCCC
DTQKFIERLLANYHQAGGEKPIVLICSSRHESYNVMALKVLPDNVIPVVVEELPSVGIDS
CHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCEEEEEEECCCCCHHHHHHHCCCCCHHH
WFAALVNGATQVLFAASRHMPPTIQRILNQEMSMAQSLLTHLGLPKETIDILYLESLREG
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCC
MPVLCEQPLGLKLGDLIGNKRERLFTALDALAETLNAQPSVQPLSISAPYGTIECQTSDC
CCEEECCCCCCCHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCEEEEECCCH
TLCMSCVAVCPTRALHLAGDSPALRFIEQDCVQCGLCVKACPEQVLSATPQLNWNKAARQ
HHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCCHHHHC
GVVTLHQEEPAKCLRCHKPFAPQSMITMLQTKLRGHSHFATPEALNRIAMCEDCRVVDMF
CEEEEECCCCHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHH
EAMAHDPEQQLKY
HHHHCCCHHHCCC
>Mature Secondary Structure
MLNNLLQQATSPNGRARQYAIEHTVELTNLIPPTVSYESGGHTLIIGPTMLIERITEPLS
CHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCEECCCCCEEEECHHHHHHHHHHHHH
SMASITLLSVDGEPGTQSNLYYADTVEISGFLGAFSVNVENHGKRVNLAQAAIGGNSFDI
HHHEEEEEEECCCCCCCCCEEEEEEEEECEEEEEEEEEECCCCCEEEHHHHHCCCCCEEE
VLDMSLNGLMSEEVPVPGYFPVGRGYPKLADALEEIPTLMGTFDKPKYFRLDPDLCAHSS
EEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEECCHHHHCCCC
RGVKGCERCVDACPAGALSSEGSEQTGHRIQINPYLCQGVGTCATACPTEAIHYALPNPT
CCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECHHHHCCCCHHHHCCCHHHHEECCCCCC
DTQKFIERLLANYHQAGGEKPIVLICSSRHESYNVMALKVLPDNVIPVVVEELPSVGIDS
CHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCEEEEEEECCCCCHHHHHHHCCCCCHHH
WFAALVNGATQVLFAASRHMPPTIQRILNQEMSMAQSLLTHLGLPKETIDILYLESLREG
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCC
MPVLCEQPLGLKLGDLIGNKRERLFTALDALAETLNAQPSVQPLSISAPYGTIECQTSDC
CCEEECCCCCCCHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCEEEEECCCH
TLCMSCVAVCPTRALHLAGDSPALRFIEQDCVQCGLCVKACPEQVLSATPQLNWNKAARQ
HHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCCHHHHC
GVVTLHQEEPAKCLRCHKPFAPQSMITMLQTKLRGHSHFATPEALNRIAMCEDCRVVDMF
CEEEEECCCCHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHH
EAMAHDPEQQLKY
HHHHCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA