Click here to switch to the map view.

The map label for this gene is cvfB [H]

Identifier: 227081662

GI number: 227081662

Start: 1565076

End: 1565972

Strand: Reverse

Name: cvfB [H]

Synonym: VCM66_1446

Alternate gene names: 227081662

Gene position: 1565972-1565076 (Counterclockwise)

Preceding gene: 227081664

Following gene: 227081657

Centisome position: 54.14

GC content: 43.92

Gene sequence:

>897_bases
ATGCGAGAAAGCATAACAGAGATAACGTATAATCTCTGCAAATTTGCTGTGAGACAGTTTTATATGATTAACATTGGTCA
AATTAATAGTTTAGAAGTGGTGAAATTCGCCGAATTTGGTGTTTTTTTGGATGCAGGAGAATACGGCACTACCTTGCTGC
CTAAGCGTTTCGTGCCAGAAGGTATTGAAATTGGGCAGTTTATTGACGTTTTCTTGTATTTTGACTCTGAAAACCAACTC
GCTGCCACAACTGAAACGCCAATCGCGCAAGTCGGCGAGTGGGGCTTAATGAAGATCGAGGGCGTAAATAGCACTGGGGC
GTTTGCCAACTGGGGCATCAAAAACAAAGATCTGCTTATTCCATACAGTGAGCAGCGTGCCCGTTTTACCGCTGGCCAAA
CCGTCTTAGTTTACGTCTACACCGATAAAGCATCGGGGCGTATTGTCGGCACAACCAAGTTCAACAAGTGGCTTGATAAA
ACACCAGCGAAATACACGCCAAACCAACAAGTTGATTTACTGATTGCGGAACGTTCTGAACTTGGCTTCAAAGCGATTGT
GAATGGCACACATTGGGGCATGATTTTCTCCTCAGATGTCTTTGGCAAGCTGTTCATCGGTAAGAAGCTCAAGGGCTACA
TCAAGAGTGTACGCGAAGATGGCAAAATCGACCTGTCCCTGCAAAAAGTAGGGGTAGAAAAAATGGATGAGCTCAGTACT
AAGATCTTAGAAACCTTAGAGAAGAAAGGAGGTTTCTTACCGCTGAGCGATAAATCGACACCTGAAGCCATTTTTGCCAC
TTTTCGCACCAGTAAAGGCACGTTCAAAAAGACCATCGGCGGTTTGTATAAGCAAGGCAAAATCGTCATTGAAAATGATG
GAATTCGTTTAGCCTAA

Upstream 100 bases:

>100_bases
CTGCCCGTCATCTGGCTGACAATCGTCAAGGTTGCCGCATCTTGCTGTTGTACGGTAATCAACGAAAACTCCTGTAAAAA
TTGCCCGATTTATTGCTCGA

Downstream 100 bases:

>100_bases
CCCTATCTTTCGTAAAAAGAACCCGAAAAAAAGGCCCAAAACGTAAGGTTTTAGGGCCTAGGGGAATGGCTCCAAAGAGC
CTGCGCTAATGGAAAATCTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 298; Mature: 298

Protein sequence:

>298_residues
MRESITEITYNLCKFAVRQFYMINIGQINSLEVVKFAEFGVFLDAGEYGTTLLPKRFVPEGIEIGQFIDVFLYFDSENQL
AATTETPIAQVGEWGLMKIEGVNSTGAFANWGIKNKDLLIPYSEQRARFTAGQTVLVYVYTDKASGRIVGTTKFNKWLDK
TPAKYTPNQQVDLLIAERSELGFKAIVNGTHWGMIFSSDVFGKLFIGKKLKGYIKSVREDGKIDLSLQKVGVEKMDELST
KILETLEKKGGFLPLSDKSTPEAIFATFRTSKGTFKKTIGGLYKQGKIVIENDGIRLA

Sequences:

>Translated_298_residues
MRESITEITYNLCKFAVRQFYMINIGQINSLEVVKFAEFGVFLDAGEYGTTLLPKRFVPEGIEIGQFIDVFLYFDSENQL
AATTETPIAQVGEWGLMKIEGVNSTGAFANWGIKNKDLLIPYSEQRARFTAGQTVLVYVYTDKASGRIVGTTKFNKWLDK
TPAKYTPNQQVDLLIAERSELGFKAIVNGTHWGMIFSSDVFGKLFIGKKLKGYIKSVREDGKIDLSLQKVGVEKMDELST
KILETLEKKGGFLPLSDKSTPEAIFATFRTSKGTFKKTIGGLYKQGKIVIENDGIRLA
>Mature_298_residues
MRESITEITYNLCKFAVRQFYMINIGQINSLEVVKFAEFGVFLDAGEYGTTLLPKRFVPEGIEIGQFIDVFLYFDSENQL
AATTETPIAQVGEWGLMKIEGVNSTGAFANWGIKNKDLLIPYSEQRARFTAGQTVLVYVYTDKASGRIVGTTKFNKWLDK
TPAKYTPNQQVDLLIAERSELGFKAIVNGTHWGMIFSSDVFGKLFIGKKLKGYIKSVREDGKIDLSLQKVGVEKMDELST
KILETLEKKGGFLPLSDKSTPEAIFATFRTSKGTFKKTIGGLYKQGKIVIENDGIRLA

Specific function: Unknown

COG id: COG2996

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CvfB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022967
- InterPro:   IPR011991
- InterPro:   IPR014464 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33312; Mature: 33312

Theoretical pI: Translated: 9.47; Mature: 9.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRESITEITYNLCKFAVRQFYMINIGQINSLEVVKFAEFGVFLDAGEYGTTLLPKRFVPE
CCCHHHHHHHHHHHHHHHHEEEEECCCCCCEEEEEEEECCEEEECCCCCCCCCCHHCCCC
GIEIGQFIDVFLYFDSENQLAATTETPIAQVGEWGLMKIEGVNSTGAFANWGIKNKDLLI
CCCCCCEEEEEEEECCCCCEEEECCCCHHHCCCCCEEEEECCCCCCCEEECCCCCCCEEE
PYSEQRARFTAGQTVLVYVYTDKASGRIVGTTKFNKWLDKTPAKYTPNQQVDLLIAERSE
CCCCCCCEEECCCEEEEEEEECCCCCEEEEECHHHHHHHCCCCCCCCCCCEEEEEECCCC
LGFKAIVNGTHWGMIFSSDVFGKLFIGKKLKGYIKSVREDGKIDLSLQKVGVEKMDELST
CCEEEEECCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEEEEHHCCHHHHHHHHH
KILETLEKKGGFLPLSDKSTPEAIFATFRTSKGTFKKTIGGLYKQGKIVIENDGIRLA
HHHHHHHHCCCEEECCCCCCCHHEEEEEECCCCHHHHHHHHHHHCCEEEEECCCEEEC
>Mature Secondary Structure
MRESITEITYNLCKFAVRQFYMINIGQINSLEVVKFAEFGVFLDAGEYGTTLLPKRFVPE
CCCHHHHHHHHHHHHHHHHEEEEECCCCCCEEEEEEEECCEEEECCCCCCCCCCHHCCCC
GIEIGQFIDVFLYFDSENQLAATTETPIAQVGEWGLMKIEGVNSTGAFANWGIKNKDLLI
CCCCCCEEEEEEEECCCCCEEEECCCCHHHCCCCCEEEEECCCCCCCEEECCCCCCCEEE
PYSEQRARFTAGQTVLVYVYTDKASGRIVGTTKFNKWLDKTPAKYTPNQQVDLLIAERSE
CCCCCCCEEECCCEEEEEEEECCCCCEEEEECHHHHHHHCCCCCCCCCCCEEEEEECCCC
LGFKAIVNGTHWGMIFSSDVFGKLFIGKKLKGYIKSVREDGKIDLSLQKVGVEKMDELST
CCEEEEECCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEEEEHHCCHHHHHHHHH
KILETLEKKGGFLPLSDKSTPEAIFATFRTSKGTFKKTIGGLYKQGKIVIENDGIRLA
HHHHHHHHCCCEEECCCCCCCHHEEEEEECCCCHHHHHHHHHHHCCEEEEECCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA