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The map label for this gene is tlcR

Identifier: 227081635

GI number: 227081635

Start: 1530087

End: 1530653

Strand: Direct

Name: tlcR

Synonym: VCM66_1419

Alternate gene names: NA

Gene position: 1530087-1530653 (Clockwise)

Preceding gene: 227081629

Following gene: 227081636

Centisome position: 52.9

GC content: 41.27

Gene sequence:

>567_bases
ATGCGAGTATTAAGAATGTCAGAAGTGAGCATTGCAGACCGAATTAAAAAAGCCATTATTGACAATGGCGGCTACCAAAA
CATTAGTGACGTCACAGGCATCAGTAAAAGTACTTTAGCCCGCATGGCTGCCAATCAGACAGAGCCAAAGCTCAAAGACG
TTATGGCTATATCGAAAGCAACAGGCGTTAGTCTTAACTATATCGCCTATGGGATGCTGACAGAGGATGAGGAAGAGTCT
GCTCTTAATGAGAAGAAGATGTTCAACTTAATTCTTAACTTAGTGAATCATGTCAGTCGTGAAGTTGAAGAGTTAAGAGC
AAAAGTAGGAGTAAATGATCCCAAAGGGAACCTAAATGCAAGACGCACAATCGATGGGCTGAGCAAAGACATCACCGACA
GCGTTACCGATGGTGCAGATATAAACAACCTCTCTCCAGAAGCTCTCGGCATAGACTCTAAAGAACACATAGAACTACTG
TTTGATTTACTCAATGAAGAGTCAAAACGTCGAAATAGCAATTTAGATACAATGCTGGAACCCACACAACCACATAAATC
AAAATGA

Upstream 100 bases:

>100_bases
CTTTTTTGACAACGAGAAAGTGAGACTCTCCATACTCAGAAATGAGTATGACGAAGATCACACTAAAAAACAGGGTATAT
AATCTCGAACATGAACCTTA

Downstream 100 bases:

>100_bases
AACCATAAGCCGCTATTAGAGCATGCGGCTCTCGAACTTCTCCGGCGCATCGAACTCTTTCCATTCGGTGCGCTTTTTCT
TTCCCATCTCTCTAAATCTC

Product: tlcR protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 188; Mature: 188

Protein sequence:

>188_residues
MRVLRMSEVSIADRIKKAIIDNGGYQNISDVTGISKSTLARMAANQTEPKLKDVMAISKATGVSLNYIAYGMLTEDEEES
ALNEKKMFNLILNLVNHVSREVEELRAKVGVNDPKGNLNARRTIDGLSKDITDSVTDGADINNLSPEALGIDSKEHIELL
FDLLNEESKRRNSNLDTMLEPTQPHKSK

Sequences:

>Translated_188_residues
MRVLRMSEVSIADRIKKAIIDNGGYQNISDVTGISKSTLARMAANQTEPKLKDVMAISKATGVSLNYIAYGMLTEDEEES
ALNEKKMFNLILNLVNHVSREVEELRAKVGVNDPKGNLNARRTIDGLSKDITDSVTDGADINNLSPEALGIDSKEHIELL
FDLLNEESKRRNSNLDTMLEPTQPHKSK
>Mature_188_residues
MRVLRMSEVSIADRIKKAIIDNGGYQNISDVTGISKSTLARMAANQTEPKLKDVMAISKATGVSLNYIAYGMLTEDEEES
ALNEKKMFNLILNLVNHVSREVEELRAKVGVNDPKGNLNARRTIDGLSKDITDSVTDGADINNLSPEALGIDSKEHIELL
FDLLNEESKRRNSNLDTMLEPTQPHKSK

Specific function: Unknown

COG id: COG1396

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20826; Mature: 20826

Theoretical pI: Translated: 5.14; Mature: 5.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVLRMSEVSIADRIKKAIIDNGGYQNISDVTGISKSTLARMAANQTEPKLKDVMAISKA
CCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHH
TGVSLNYIAYGMLTEDEEESALNEKKMFNLILNLVNHVSREVEELRAKVGVNDPKGNLNA
CCCEEHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCH
RRTIDGLSKDITDSVTDGADINNLSPEALGIDSKEHIELLFDLLNEESKRRNSNLDTMLE
HHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC
PTQPHKSK
CCCCCCCC
>Mature Secondary Structure
MRVLRMSEVSIADRIKKAIIDNGGYQNISDVTGISKSTLARMAANQTEPKLKDVMAISKA
CCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHH
TGVSLNYIAYGMLTEDEEESALNEKKMFNLILNLVNHVSREVEELRAKVGVNDPKGNLNA
CCCEEHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCH
RRTIDGLSKDITDSVTDGADINNLSPEALGIDSKEHIELLFDLLNEESKRRNSNLDTMLE
HHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC
PTQPHKSK
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA