Definition Vibrio cholerae M66-2 chromosome I, complete genome.
Accession NC_012578
Length 2,892,523

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The map label for this gene is 227081608

Identifier: 227081608

GI number: 227081608

Start: 1490672

End: 1490836

Strand: Reverse

Name: 227081608

Synonym: VCM66_1392

Alternate gene names: NA

Gene position: 1490836-1490672 (Counterclockwise)

Preceding gene: 227081609

Following gene: 227081607

Centisome position: 51.54

GC content: 41.82

Gene sequence:

>165_bases
GTGGAAAGCTTATATTTGCTCATCCCAATTGCGATTGTGTTAGTTTGTGTCGCGGTCGGTATTTTTTTGTGGGCAGTCAA
AAGTGAGCAATTTGAAGATCTTGAGCGCCAAGGCCACAACATCTTATTTGAAGATGAAGAGAGCCAAGATAAGGATAAAC
GGTGA

Upstream 100 bases:

>100_bases
ATTAGTCGCGCCCTATATTGCAGTGGTAGGGATGTCGGGAAGTTCGATTATTGTCGTGACCAACTCACTTCGTCTGCTGA
AAAAGCAAGGGAGATAACCG

Downstream 100 bases:

>100_bases
GTCCTGATTATTTGGGGGCTTGGGTGGTAGGCCTGCTGGGAGCGGGTCACTGTTTGGGCATGTGCGGCGGCATTAGCGCT
TTGCTTACCCTTGATCCGTC

Product: FixS-related protein

Products: NA

Alternate protein names: Cytochrome Oxidase Maturation Protein; FixS-Like Protein

Number of amino acids: Translated: 54; Mature: 54

Protein sequence:

>54_residues
MESLYLLIPIAIVLVCVAVGIFLWAVKSEQFEDLERQGHNILFEDEESQDKDKR

Sequences:

>Translated_54_residues
MESLYLLIPIAIVLVCVAVGIFLWAVKSEQFEDLERQGHNILFEDEESQDKDKR
>Mature_54_residues
MESLYLLIPIAIVLVCVAVGIFLWAVKSEQFEDLERQGHNILFEDEESQDKDKR

Specific function: Unknown

COG id: COG3197

COG function: function code P; Uncharacterized protein, possibly involved in nitrogen fixation

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 6279; Mature: 6279

Theoretical pI: Translated: 4.14; Mature: 4.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESLYLLIPIAIVLVCVAVGIFLWAVKSEQFEDLERQGHNILFEDEESQDKDKR
CCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCEECCCCCCCCCCC
>Mature Secondary Structure
MESLYLLIPIAIVLVCVAVGIFLWAVKSEQFEDLERQGHNILFEDEESQDKDKR
CCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA