| Definition | Vibrio cholerae M66-2 chromosome I, complete genome. |
|---|---|
| Accession | NC_012578 |
| Length | 2,892,523 |
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The map label for this gene is cheA-1 [H]
Identifier: 227081568
GI number: 227081568
Start: 1444499
End: 1446784
Strand: Reverse
Name: cheA-1 [H]
Synonym: VCM66_1352
Alternate gene names: 227081568
Gene position: 1446784-1444499 (Counterclockwise)
Preceding gene: 227081569
Following gene: 227081567
Centisome position: 50.02
GC content: 46.02
Gene sequence:
>2286_bases ATGAACCCAATAATGCAAAACTTCATCATCGAGAGCCGAGATTTAATTGAATCCGCGGCACGAGGTCTACTTGCGTTAGA AGCGAATCCCGATGACAAAGCCATCATTAACGAGTTATTCCGAGAAATACATACCGTAAAGGGAGCCTCAGGTATTCTCG ATAATATTGCGCCTTTCACCCAATTAGCGCATCGAATGGAAGATTTGATGCAAAAAGTGCGTGATGGACATGTGGCTTTA AACGGCACAATGCTTGACCTGATGTTGGGCTGCTGCGACCAATTTCTCTTATGGATTGAAGAGTTAGAACAACACCAAGA GCTCTCAGCAGAGGCGGTATCGATCAGTAAACAGATGATTGCTCAGTTAGCACCTTTAACTCAAGCCGCGCCAACACACA CGCCTACCCCTGCCGTAGCGGCGCAAGAAGAGACGGCCACCCTATCCATCAGTGAATTAACGGAGCTATTAGGACGAGAT TGCTTCAACGATGTAGAAGCGCTTTTGGAACATCCCGATGCTTTACTCTTGATTTATACCCCCGATAAACAGTGCTTTTT CTCTGGGGACGACCCATTGGCTTGGATGCGTAGTGTTGAAAAGGTCTCTTGGCGTAAAGTAGTGCTCATCCCAGATTCTG AGCCTTTCGATACCTATCAGGCTCAAATGCAGTTTCTGCTGCTGACTCAATCAGCGAAAAAAGACCTAGAGCAGCAACTT GCTCCGATAGAAGGCCAATACCGCCTTTACCGCATTCAATCGGACAACCTACCCACAGCACCGATTGATCAGCGCACACA ATATGTCGAGCGAATTGTTAAACAACAAATCGCGTTGCTTAGAGAAGAACAAGTTTCGGAATCCGTACGTGCTGGTACCT TCTTATCGATTAAAAATCTCTACTGTGCCCTGAGCCAACAAATCAGTGATCGCCCTGCTCCCTTGCCAGAATCTGTCTCG GCCGATGAACTTATCACCTTGTTTGATAACATTTTACTCTCTTTTGCTCATCGAACCGCCATCATCGATAAATGCGAAAA TGAACCTGCTCAACCCTCCGCTATCACGGTTAACGAGCAGTTAGACAAGGTGAAGAAAAAACAGATAAAAACACTGAAGG TGGATCAGGAAAAAGTCGATTTATTGATGGATTTGGTCGGTGAGCTGATTGTTGCGAAAAACTCGATGCAATATCTCGCC TATCGTGCAGAAAATGAGTTTGGTGTTCGTAAACTTGCACAAGATATTAAAGCAGAACAGAGTGTGATATCGCGTCTTGC TGAAGACCTACAGTCTGTTGTGATGCAGGTCCGCATGGTACCACTTGCGACCGTTTTTCAACGCTACCCACGCTTGATCC GCGATATCTCACGCAAACTGGGTAAACAAGTCGATCTGATCATCGAAGGTGAAGACACTGAGGCAGATAAAAGTATTGTT GAAGATCTCTCCGAACCTTTAGTGCATCTGATCCGTAATGCCCTCGATCACGGAATAGAATCACCCGACATACGTCGCGA ACAAGGGAAGAATCCAACAGGAAAAATTACTCTAAGCGCTTTTACTCTTGATGATTCTGTCATCATCAAGATGAGTGATG ATGGTAAAGGCGTTGATGTCGAACGCGTCAAAACCAAAGCTTTGGAACGCGGGTTAGTGGAAGCGAGCAAACTTGAGCGG ATGAGCCAACAAGAGATTATTCACTTGATCTTTGAACCCGGCTTTTCAACGGTTGAACAAGTCAGTGATCTCTCAGGACG CGGTGTGGGTATGGATGCAGTTCGTACGGCTATTGAACGCAACGGCGGCACTCTCACACTCTCCTCAGAGCCGGGGAAAG GCAGTGAAATTACCATGATCCTGCCACTTTCTATGACCATTTCACGCGTCATGATGTTTGAACTTGAGCAGCAGTCCTTT GCTATTCCCATTGAATCGGTTATCCAAACGTTAAAAATTTCCCGACACAAAGACATTCGCCGTGTAAAAAATCTCGATAC GTTCATTTTACGCGGTGAAACTGTGCCTATTTTGTATCTCAAGCGTGCGTTTGAGATGAACTCTGCCCAAATTTATCCCG ACATCCAACCTATTCTTGTTGTCCGTGTGGGTGATGATGTATTGGGACTTGCCGTAGATCGATTACAAGAGGGACAAGAT GTCATCATCAAACCTCTTGAGGGTGCTTTGGCCACATTCTCCATCTACCGTGGTGCCGCCATTATGGGAGATGGGCGTGT CCTTTTAGTGCTCGATACTGAGGAGGTAGTAAAACATGCCCGTTGA
Upstream 100 bases:
>100_bases GACAACAAGGTATTCATATGGGAGCGAACTTGTATATGGTGAAACCTGTGAATCCTGAAGAATTACAACAAACTGTTACC TTGATGCTTGGGGGGTTGAA
Downstream 100 bases:
>100_bases ATATAAAAACCGAGTGGCCTATTTAGTCGATCACGTCGGAGTTGAAGAGGCAGAAACATTATTAACATGGATGGAATCGA CACCAGGGTCTAGTGTTAAT
Product: chemotaxis protein CheA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 761; Mature: 761
Protein sequence:
>761_residues MNPIMQNFIIESRDLIESAARGLLALEANPDDKAIINELFREIHTVKGASGILDNIAPFTQLAHRMEDLMQKVRDGHVAL NGTMLDLMLGCCDQFLLWIEELEQHQELSAEAVSISKQMIAQLAPLTQAAPTHTPTPAVAAQEETATLSISELTELLGRD CFNDVEALLEHPDALLLIYTPDKQCFFSGDDPLAWMRSVEKVSWRKVVLIPDSEPFDTYQAQMQFLLLTQSAKKDLEQQL APIEGQYRLYRIQSDNLPTAPIDQRTQYVERIVKQQIALLREEQVSESVRAGTFLSIKNLYCALSQQISDRPAPLPESVS ADELITLFDNILLSFAHRTAIIDKCENEPAQPSAITVNEQLDKVKKKQIKTLKVDQEKVDLLMDLVGELIVAKNSMQYLA YRAENEFGVRKLAQDIKAEQSVISRLAEDLQSVVMQVRMVPLATVFQRYPRLIRDISRKLGKQVDLIIEGEDTEADKSIV EDLSEPLVHLIRNALDHGIESPDIRREQGKNPTGKITLSAFTLDDSVIIKMSDDGKGVDVERVKTKALERGLVEASKLER MSQQEIIHLIFEPGFSTVEQVSDLSGRGVGMDAVRTAIERNGGTLTLSSEPGKGSEITMILPLSMTISRVMMFELEQQSF AIPIESVIQTLKISRHKDIRRVKNLDTFILRGETVPILYLKRAFEMNSAQIYPDIQPILVVRVGDDVLGLAVDRLQEGQD VIIKPLEGALATFSIYRGAAIMGDGRVLLVLDTEEVVKHAR
Sequences:
>Translated_761_residues MNPIMQNFIIESRDLIESAARGLLALEANPDDKAIINELFREIHTVKGASGILDNIAPFTQLAHRMEDLMQKVRDGHVAL NGTMLDLMLGCCDQFLLWIEELEQHQELSAEAVSISKQMIAQLAPLTQAAPTHTPTPAVAAQEETATLSISELTELLGRD CFNDVEALLEHPDALLLIYTPDKQCFFSGDDPLAWMRSVEKVSWRKVVLIPDSEPFDTYQAQMQFLLLTQSAKKDLEQQL APIEGQYRLYRIQSDNLPTAPIDQRTQYVERIVKQQIALLREEQVSESVRAGTFLSIKNLYCALSQQISDRPAPLPESVS ADELITLFDNILLSFAHRTAIIDKCENEPAQPSAITVNEQLDKVKKKQIKTLKVDQEKVDLLMDLVGELIVAKNSMQYLA YRAENEFGVRKLAQDIKAEQSVISRLAEDLQSVVMQVRMVPLATVFQRYPRLIRDISRKLGKQVDLIIEGEDTEADKSIV EDLSEPLVHLIRNALDHGIESPDIRREQGKNPTGKITLSAFTLDDSVIIKMSDDGKGVDVERVKTKALERGLVEASKLER MSQQEIIHLIFEPGFSTVEQVSDLSGRGVGMDAVRTAIERNGGTLTLSSEPGKGSEITMILPLSMTISRVMMFELEQQSF AIPIESVIQTLKISRHKDIRRVKNLDTFILRGETVPILYLKRAFEMNSAQIYPDIQPILVVRVGDDVLGLAVDRLQEGQD VIIKPLEGALATFSIYRGAAIMGDGRVLLVLDTEEVVKHAR >Mature_761_residues MNPIMQNFIIESRDLIESAARGLLALEANPDDKAIINELFREIHTVKGASGILDNIAPFTQLAHRMEDLMQKVRDGHVAL NGTMLDLMLGCCDQFLLWIEELEQHQELSAEAVSISKQMIAQLAPLTQAAPTHTPTPAVAAQEETATLSISELTELLGRD CFNDVEALLEHPDALLLIYTPDKQCFFSGDDPLAWMRSVEKVSWRKVVLIPDSEPFDTYQAQMQFLLLTQSAKKDLEQQL APIEGQYRLYRIQSDNLPTAPIDQRTQYVERIVKQQIALLREEQVSESVRAGTFLSIKNLYCALSQQISDRPAPLPESVS ADELITLFDNILLSFAHRTAIIDKCENEPAQPSAITVNEQLDKVKKKQIKTLKVDQEKVDLLMDLVGELIVAKNSMQYLA YRAENEFGVRKLAQDIKAEQSVISRLAEDLQSVVMQVRMVPLATVFQRYPRLIRDISRKLGKQVDLIIEGEDTEADKSIV EDLSEPLVHLIRNALDHGIESPDIRREQGKNPTGKITLSAFTLDDSVIIKMSDDGKGVDVERVKTKALERGLVEASKLER MSQQEIIHLIFEPGFSTVEQVSDLSGRGVGMDAVRTAIERNGGTLTLSSEPGKGSEITMILPLSMTISRVMMFELEQQSF AIPIESVIQTLKISRHKDIRRVKNLDTFILRGETVPILYLKRAFEMNSAQIYPDIQPILVVRVGDDVLGLAVDRLQEGQD VIIKPLEGALATFSIYRGAAIMGDGRVLLVLDTEEVVKHAR
Specific function: Involved in the transmission of sensory signals from the chemoreceptors to the flagellar motors. CheA is autophosphorylated; it can transfer its phosphate group to either CheB or CheY [H]
COG id: COG0643
COG function: function code NT; Chemotaxis protein histidine kinase and related kinases
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HPt domain [H]
Homologues:
Organism=Escherichia coli, GI1788197, Length=395, Percent_Identity=37.9746835443038, Blast_Score=259, Evalue=4e-70,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR002545 - InterPro: IPR004358 - InterPro: IPR008207 - InterPro: IPR004105 - InterPro: IPR005467 - InterPro: IPR009082 - InterPro: IPR010808 [H]
Pfam domain/function: PF01584 CheW; PF02895 H-kinase_dim; PF02518 HATPase_c; PF01627 Hpt; PF07194 P2 [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 85159; Mature: 85159
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: PS50851 CHEW ; PS50894 HPT ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPIMQNFIIESRDLIESAARGLLALEANPDDKAIINELFREIHTVKGASGILDNIAPFT CCHHHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHH QLAHRMEDLMQKVRDGHVALNGTMLDLMLGCCDQFLLWIEELEQHQELSAEAVSISKQMI HHHHHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AQLAPLTQAAPTHTPTPAVAAQEETATLSISELTELLGRDCFNDVEALLEHPDALLLIYT HHHHCHHHCCCCCCCCCCCCCCCCHHEEEHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEC PDKQCFFSGDDPLAWMRSVEKVSWRKVVLIPDSEPFDTYQAQMQFLLLTQSAKKDLEQQL CCCCEEECCCCHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH APIEGQYRLYRIQSDNLPTAPIDQRTQYVERIVKQQIALLREEQVSESVRAGTFLSIKNL CCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH YCALSQQISDRPAPLPESVSADELITLFDNILLSFAHRTAIIDKCENEPAQPSAITVNEQ HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHH LDKVKKKQIKTLKVDQEKVDLLMDLVGELIVAKNSMQYLAYRAENEFGVRKLAQDIKAEQ HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHEECCCCHHHHHHHHHHHHHH SVISRLAEDLQSVVMQVRMVPLATVFQRYPRLIRDISRKLGKQVDLIIEGEDTEADKSIV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHH EDLSEPLVHLIRNALDHGIESPDIRREQGKNPTGKITLSAFTLDDSVIIKMSDDGKGVDV HHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCEEEEEEEEECCEEEEEECCCCCCCCH ERVKTKALERGLVEASKLERMSQQEIIHLIFEPGFSTVEQVSDLSGRGVGMDAVRTAIER HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHC NGGTLTLSSEPGKGSEITMILPLSMTISRVMMFELEQQSFAIPIESVIQTLKISRHKDIR CCCEEEECCCCCCCCEEEEEEEHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH RVKNLDTFILRGETVPILYLKRAFEMNSAQIYPDIQPILVVRVGDDVLGLAVDRLQEGQD HHHCCCCEEEECCCCHHHHHHHHHCCCCCEECCCCCEEEEEEECCHHHHHHHHHHHCCCC VIIKPLEGALATFSIYRGAAIMGDGRVLLVLDTEEVVKHAR EEEECHHHHHHHHHHHCCEEEECCCEEEEEECHHHHHHCCC >Mature Secondary Structure MNPIMQNFIIESRDLIESAARGLLALEANPDDKAIINELFREIHTVKGASGILDNIAPFT CCHHHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHH QLAHRMEDLMQKVRDGHVALNGTMLDLMLGCCDQFLLWIEELEQHQELSAEAVSISKQMI HHHHHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AQLAPLTQAAPTHTPTPAVAAQEETATLSISELTELLGRDCFNDVEALLEHPDALLLIYT HHHHCHHHCCCCCCCCCCCCCCCCHHEEEHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEC PDKQCFFSGDDPLAWMRSVEKVSWRKVVLIPDSEPFDTYQAQMQFLLLTQSAKKDLEQQL CCCCEEECCCCHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH APIEGQYRLYRIQSDNLPTAPIDQRTQYVERIVKQQIALLREEQVSESVRAGTFLSIKNL CCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH YCALSQQISDRPAPLPESVSADELITLFDNILLSFAHRTAIIDKCENEPAQPSAITVNEQ HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHH LDKVKKKQIKTLKVDQEKVDLLMDLVGELIVAKNSMQYLAYRAENEFGVRKLAQDIKAEQ HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHEECCCCHHHHHHHHHHHHHH SVISRLAEDLQSVVMQVRMVPLATVFQRYPRLIRDISRKLGKQVDLIIEGEDTEADKSIV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHH EDLSEPLVHLIRNALDHGIESPDIRREQGKNPTGKITLSAFTLDDSVIIKMSDDGKGVDV HHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCEEEEEEEEECCEEEEEECCCCCCCCH ERVKTKALERGLVEASKLERMSQQEIIHLIFEPGFSTVEQVSDLSGRGVGMDAVRTAIER HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHC NGGTLTLSSEPGKGSEITMILPLSMTISRVMMFELEQQSFAIPIESVIQTLKISRHKDIR CCCEEEECCCCCCCCEEEEEEEHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH RVKNLDTFILRGETVPILYLKRAFEMNSAQIYPDIQPILVVRVGDDVLGLAVDRLQEGQD HHHCCCCEEEECCCCHHHHHHHHHCCCCCEECCCCCEEEEEEECCHHHHHHHHHHHCCCC VIIKPLEGALATFSIYRGAAIMGDGRVLLVLDTEEVVKHAR EEEECHHHHHHHHHHHCCEEEECCCEEEEEECHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8550470; 10360571; 9989504 [H]