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The map label for this gene is yvaQ [H]

Identifier: 227081484

GI number: 227081484

Start: 1352500

End: 1354131

Strand: Reverse

Name: yvaQ [H]

Synonym: VCM66_1268

Alternate gene names: 227081484

Gene position: 1354131-1352500 (Counterclockwise)

Preceding gene: 227081488

Following gene: 227081483

Centisome position: 46.81

GC content: 48.65

Gene sequence:

>1632_bases
ATGTTTCTAAAAAACTTGTCGATAGGCAAAAAAATTGCAGCCTCGTTTTCGGTTATTGCAGTAATTAGCCTAGGATTCGC
CATCTACCTGATTTCAGAGCTAGATAAAATCCAATCTGAATTACTCAACTACACCGATGACACCTTACCGGCAATGGAAA
ATGTCGATGCGATAAAAGACAAGATGTCTTACTGGCGGCGTACCCAGTTTGCGGTACTGCCAATGAAAGATGAAGCGCAA
ATTCGCCAAACTATCGAGCGTAATAATCGCGTTCAAGCAGAAATCAACGATTCTCTGGTGGCTTACGGTAAAACCGTATG
GCCGGGCGAAGAAGAGCAAACCTTCAAACGTCTCATGGGAAATTGGAATGCTTACACGGCGGTCACCGATCAATTTAACC
AGACGCTTTTGACCCAAGGTGCCGATGACGCTTACCCCATTTTGGCCAACTCACTCAGTACTTTCGAAGCGTTAGAGAGC
GATTTCACGCTCCTGATCGGCATTTTGCATCAAGCCATGGACAGCAACAAAGTGCAAATCTTAAGTTCAGTGAAGACGCT
CAACTCCACCTCAGTGGCCAGCAATATCGCTATTTTAGCCATCATGGTGCTCATGACTTGGCTGTTAACTCGCCTAATCT
GCGGTCCGTTGGCGATTGTGATGAAGCAGTCGAATGCGATTGCCAAAGGCGATCTGTCGCAGACGATGGATCGCTCCTCT
ATTGGTAACGACGAATTGGGAACCTTGGCCAATGCGTCTGAGCAGATGCAGCAAAACCTCCGTCAACTGATTGATGAAAT
CATTTCAGCGGTGACTCAGCTTAGTAGCGCAGTAGAAGAGATGACGCAGATCTCTAACCAATCTGCAGATGGTATGAAAG
AGCAGCAGTACCAAATCACTCAAGTAGCAACAGCAATGGCGCAAATGAAAGCGGCAGTGGCGGACGTAGCTCGTAACACC
GAAGACTCCGCTAGCCAAGCGATGGCAGCCAATCACAAGTCACAAGAAGGGGCTCGTGAAAATGCTTCTATGGTTCGCTC
GATCCAACAAGTGGCCGATATTATCGGAGAGGCGGGTCAAACTGTGAGTGAACTTGAGCAGCAATCTAGCCAGATCAACG
TTGTGGTTGATGTGATCCGCAGTATTGCCGACCAAACCAACCTCCTCGCGCTCAACGCGGCTATCGAAGCGGCACGTGCC
GGTGAATCAGGTCGCGGCTTTGCGGTGGTTGCGGATGAAGTTCGGACTCTGGCGGGTCGTACCCAAGATTCAACCGGTGA
AATCACCACGATTATTGAAAAACTGCAAGTCATGGCCAAACAAGCCAAAGATGCGACTGAACGTTCTCGCTCGAGTATCG
ATAAGTGTGTGGAACAAGGTAACCACTCTCAGTCTTTGATGATCTCTATCGAAGAGTCGATTGCCAATATCGCCGATGTG
GGTACACAAATCGCCAGCGCATGTAGTGAACAAGATTCGGTCGCGGATGAACTCAGCCGCAATGTGGAAAACATTCACTT
GGCGTCACAAGAAGTCGCGCAGGGTTCACAACAGACAGCCCAAGCTTGTCGTGAACTGACTCAGCTCGCGGTTTCGCTAC
AAGATACACTACGCCGATTTAAGATTCGTTAA

Upstream 100 bases:

>100_bases
ATAGTATGCGCCGACTTTGGGACATACGTAACTTTGTCGCAGATAAGGATGTTGTTATTCACGCGACTTTGAGTGACATC
AATCTAAAGGTAAAACATTC

Downstream 100 bases:

>100_bases
TTTTCACGCTACCTACAGGGCGGCGTCTTTCTCTATTCTTCTTGCGACTTGGAGCAGCCGCTTCTCAGTCGCAAGAAGAA
TGTTCCATCAATGATAACCA

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: Methyl-accepting chemotaxis protein [H]

Number of amino acids: Translated: 543; Mature: 543

Protein sequence:

>543_residues
MFLKNLSIGKKIAASFSVIAVISLGFAIYLISELDKIQSELLNYTDDTLPAMENVDAIKDKMSYWRRTQFAVLPMKDEAQ
IRQTIERNNRVQAEINDSLVAYGKTVWPGEEEQTFKRLMGNWNAYTAVTDQFNQTLLTQGADDAYPILANSLSTFEALES
DFTLLIGILHQAMDSNKVQILSSVKTLNSTSVASNIAILAIMVLMTWLLTRLICGPLAIVMKQSNAIAKGDLSQTMDRSS
IGNDELGTLANASEQMQQNLRQLIDEIISAVTQLSSAVEEMTQISNQSADGMKEQQYQITQVATAMAQMKAAVADVARNT
EDSASQAMAANHKSQEGARENASMVRSIQQVADIIGEAGQTVSELEQQSSQINVVVDVIRSIADQTNLLALNAAIEAARA
GESGRGFAVVADEVRTLAGRTQDSTGEITTIIEKLQVMAKQAKDATERSRSSIDKCVEQGNHSQSLMISIEESIANIADV
GTQIASACSEQDSVADELSRNVENIHLASQEVAQGSQQTAQACRELTQLAVSLQDTLRRFKIR

Sequences:

>Translated_543_residues
MFLKNLSIGKKIAASFSVIAVISLGFAIYLISELDKIQSELLNYTDDTLPAMENVDAIKDKMSYWRRTQFAVLPMKDEAQ
IRQTIERNNRVQAEINDSLVAYGKTVWPGEEEQTFKRLMGNWNAYTAVTDQFNQTLLTQGADDAYPILANSLSTFEALES
DFTLLIGILHQAMDSNKVQILSSVKTLNSTSVASNIAILAIMVLMTWLLTRLICGPLAIVMKQSNAIAKGDLSQTMDRSS
IGNDELGTLANASEQMQQNLRQLIDEIISAVTQLSSAVEEMTQISNQSADGMKEQQYQITQVATAMAQMKAAVADVARNT
EDSASQAMAANHKSQEGARENASMVRSIQQVADIIGEAGQTVSELEQQSSQINVVVDVIRSIADQTNLLALNAAIEAARA
GESGRGFAVVADEVRTLAGRTQDSTGEITTIIEKLQVMAKQAKDATERSRSSIDKCVEQGNHSQSLMISIEESIANIADV
GTQIASACSEQDSVADELSRNVENIHLASQEVAQGSQQTAQACRELTQLAVSLQDTLRRFKIR
>Mature_543_residues
MFLKNLSIGKKIAASFSVIAVISLGFAIYLISELDKIQSELLNYTDDTLPAMENVDAIKDKMSYWRRTQFAVLPMKDEAQ
IRQTIERNNRVQAEINDSLVAYGKTVWPGEEEQTFKRLMGNWNAYTAVTDQFNQTLLTQGADDAYPILANSLSTFEALES
DFTLLIGILHQAMDSNKVQILSSVKTLNSTSVASNIAILAIMVLMTWLLTRLICGPLAIVMKQSNAIAKGDLSQTMDRSS
IGNDELGTLANASEQMQQNLRQLIDEIISAVTQLSSAVEEMTQISNQSADGMKEQQYQITQVATAMAQMKAAVADVARNT
EDSASQAMAANHKSQEGARENASMVRSIQQVADIIGEAGQTVSELEQQSSQINVVVDVIRSIADQTNLLALNAAIEAARA
GESGRGFAVVADEVRTLAGRTQDSTGEITTIIEKLQVMAKQAKDATERSRSSIDKCVEQGNHSQSLMISIEESIANIADV
GTQIASACSEQDSVADELSRNVENIHLASQEVAQGSQQTAQACRELTQLAVSLQDTLRRFKIR

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=348, Percent_Identity=31.6091954022989, Blast_Score=126, Evalue=4e-30,
Organism=Escherichia coli, GI1788194, Length=323, Percent_Identity=30.6501547987616, Blast_Score=125, Evalue=5e-30,
Organism=Escherichia coli, GI1788195, Length=322, Percent_Identity=31.055900621118, Blast_Score=120, Evalue=2e-28,
Organism=Escherichia coli, GI2367378, Length=323, Percent_Identity=29.4117647058824, Blast_Score=118, Evalue=9e-28,
Organism=Escherichia coli, GI1789453, Length=347, Percent_Identity=25.6484149855908, Blast_Score=97, Evalue=2e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 59170; Mature: 59170

Theoretical pI: Translated: 4.45; Mature: 4.45

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFLKNLSIGKKIAASFSVIAVISLGFAIYLISELDKIQSELLNYTDDTLPAMENVDAIKD
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
KMSYWRRTQFAVLPMKDEAQIRQTIERNNRVQAEINDSLVAYGKTVWPGEEEQTFKRLMG
HHHHHHHCCEEEECCCCHHHHHHHHHHCCCEEEECCCHHHHCCCCCCCCCHHHHHHHHHC
NWNAYTAVTDQFNQTLLTQGADDAYPILANSLSTFEALESDFTLLIGILHQAMDSNKVQI
CCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
LSSVKTLNSTSVASNIAILAIMVLMTWLLTRLICGPLAIVMKQSNAIAKGDLSQTMDRSS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHC
IGNDELGTLANASEQMQQNLRQLIDEIISAVTQLSSAVEEMTQISNQSADGMKEQQYQIT
CCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
QVATAMAQMKAAVADVARNTEDSASQAMAANHKSQEGARENASMVRSIQQVADIIGEAGQ
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHCCHHHHHHHHHHHHHHHHHHHHCCC
TVSELEQQSSQINVVVDVIRSIADQTNLLALNAAIEAARAGESGRGFAVVADEVRTLAGR
HHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHCCCCCCCEEEEHHHHHHHHCC
TQDSTGEITTIIEKLQVMAKQAKDATERSRSSIDKCVEQGNHSQSLMISIEESIANIADV
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHH
GTQIASACSEQDSVADELSRNVENIHLASQEVAQGSQQTAQACRELTQLAVSLQDTLRRF
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
KIR
CCC
>Mature Secondary Structure
MFLKNLSIGKKIAASFSVIAVISLGFAIYLISELDKIQSELLNYTDDTLPAMENVDAIKD
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
KMSYWRRTQFAVLPMKDEAQIRQTIERNNRVQAEINDSLVAYGKTVWPGEEEQTFKRLMG
HHHHHHHCCEEEECCCCHHHHHHHHHHCCCEEEECCCHHHHCCCCCCCCCHHHHHHHHHC
NWNAYTAVTDQFNQTLLTQGADDAYPILANSLSTFEALESDFTLLIGILHQAMDSNKVQI
CCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
LSSVKTLNSTSVASNIAILAIMVLMTWLLTRLICGPLAIVMKQSNAIAKGDLSQTMDRSS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHC
IGNDELGTLANASEQMQQNLRQLIDEIISAVTQLSSAVEEMTQISNQSADGMKEQQYQIT
CCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
QVATAMAQMKAAVADVARNTEDSASQAMAANHKSQEGARENASMVRSIQQVADIIGEAGQ
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHCCHHHHHHHHHHHHHHHHHHHHCCC
TVSELEQQSSQINVVVDVIRSIADQTNLLALNAAIEAARAGESGRGFAVVADEVRTLAGR
HHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHCCCCCCCEEEEHHHHHHHHCC
TQDSTGEITTIIEKLQVMAKQAKDATERSRSSIDKCVEQGNHSQSLMISIEESIANIADV
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHH
GTQIASACSEQDSVADELSRNVENIHLASQEVAQGSQQTAQACRELTQLAVSLQDTLRRF
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
KIR
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]