| Definition | Vibrio cholerae M66-2 chromosome I, complete genome. |
|---|---|
| Accession | NC_012578 |
| Length | 2,892,523 |
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The map label for this gene is gltP-1 [H]
Identifier: 227081340
GI number: 227081340
Start: 1198115
End: 1199491
Strand: Reverse
Name: gltP-1 [H]
Synonym: VCM66_1123
Alternate gene names: 227081340
Gene position: 1199491-1198115 (Counterclockwise)
Preceding gene: 227081341
Following gene: 227081337
Centisome position: 41.47
GC content: 48.37
Gene sequence:
>1377_bases ATGTGCTTATTGCTAAATGTAAACATTCCGTGTAAAAAGCAGGAGCAAAATTTTTGCCCATTTAGTGATATGACACTAGT GGCTAACACTAGGAATTTACAATTTATTAGCACAGAGGTTATGGAAGTGTTAAAGACAAAGGGTTTACTAAACAACATCG GCGTGCAAGTGGTGATCGCCATGCTCGCGGGTACCGCAGTCGGTGCAGCAATGGGTCACGATGCGACACTATTTGCTCCA CTGGGTGCGATTTTTATTAATCTGATCAAAATGCTGGTGATTCCTCTGGTGGCTGTGGCACTGATTTCTGGTGCAGCAGG TCTGGGTGATAGCCATTCTGCTGGCAAGGTCGGTGCAGTGACGTTAAGTTACTTTGCTATTACCTCTGCCGCCGCCGTAG CTCTGGCATTGATCATGGGTGAACTGTTCCAACCGGGTGTCGGAGTCGATGTTTCTGGTGTAGAGAGCATGTTCTCTTCT GAATACGCTGCGCAAGGTGAGCTCCCCACTTTCTGGGCAACCATCATTGGTATGATCCCAACCAACGTTTTCCAGTCACT GAACGAAGCGAACATTCTACAGATCTTGGTTTTCTGTCTGTTTTTAGGCATTGCGATTTCTAAGCAAGCCAAAGAAAAAC GTGACCCAGTGATCAACGCGGTGAACACCATTGTTGATGCCATGGTGTGGATGATCAATAAAGTGATGCTGATTGCGCCG ATTGGTGTATTTGGCTTAATGGCTGATGCCGTGGGTACTTTTGGTTTCAGCGCGCTGATGGTGGTGTTTAAGCTGTTCGT CGTTTACGTAGCGGCGATTGCGATTTTTGGCTTTGTGGCTTACCCAGTCATGATCCAACTGTTCAGCAAAACATCGGCGA AAAAGTTCATTCAAGCAATGAAAAAGCCACAAGCGGTTGCACTGTCTACGGCCTCTTCTATGGCGACACTGCCTGTCACT ATGGATACGGTGAAAAACGATCTGGGTGTGCGCAACTCAACGGCTTCTTTCGTACTGCCTTTGGGCGCGACCATCAATAT GTCAGGTAACGCGATCTACTACGGTCTGGTGGCTATCTTCTTTGCTCAGCTGTTTAATATTGACCTGAGCATGGGCGCTT ACATTGCGATCATCGTGACGGCGACTTTAGGTGCGGTTGGTCAAGCGGGTGTTCCGGGGCCTTCATTCCTTGTGGTGGCG GTTCTGCTCTCTGCCGGTATTCCTATTGAAGGTCTACCACTGCTGTTTGCACTGGATCGTATCTTTGACATGATCCGTAC TGCGCTCAACATTACCGGCGATGCGGCTTGTGCAGTGATTGTGGATTCGATGATCACTGAGGAAGCGGCGGCTGAGCTGG AAAAACGTGAAGCTTAA
Upstream 100 bases:
>100_bases ATTCAAGACTTCATATAACCAAAATCAATAGCAAACGTTTTCTTTGCAGATAAAAACGCCAAATTACTCTCGTTTTACTC CGCTATTGAGAAAACGCTCG
Downstream 100 bases:
>100_bases TCGCTGATCATTATCATTCATAAAAAAAGCCAGACATTAACTGTCTGGCTTTTTCTTTATTGAGTCACGGGCAAATTATC CCGCGAAGGAGATGGGTTCG
Product: proton/glutamate symporter
Products: L-aspartate [Cytoplasm]; Proton [Cytoplasm]; L-glutamate [Cytoplasm] [C]
Alternate protein names: Glutamate-aspartate carrier protein [H]
Number of amino acids: Translated: 458; Mature: 458
Protein sequence:
>458_residues MCLLLNVNIPCKKQEQNFCPFSDMTLVANTRNLQFISTEVMEVLKTKGLLNNIGVQVVIAMLAGTAVGAAMGHDATLFAP LGAIFINLIKMLVIPLVAVALISGAAGLGDSHSAGKVGAVTLSYFAITSAAAVALALIMGELFQPGVGVDVSGVESMFSS EYAAQGELPTFWATIIGMIPTNVFQSLNEANILQILVFCLFLGIAISKQAKEKRDPVINAVNTIVDAMVWMINKVMLIAP IGVFGLMADAVGTFGFSALMVVFKLFVVYVAAIAIFGFVAYPVMIQLFSKTSAKKFIQAMKKPQAVALSTASSMATLPVT MDTVKNDLGVRNSTASFVLPLGATINMSGNAIYYGLVAIFFAQLFNIDLSMGAYIAIIVTATLGAVGQAGVPGPSFLVVA VLLSAGIPIEGLPLLFALDRIFDMIRTALNITGDAACAVIVDSMITEEAAAELEKREA
Sequences:
>Translated_458_residues MCLLLNVNIPCKKQEQNFCPFSDMTLVANTRNLQFISTEVMEVLKTKGLLNNIGVQVVIAMLAGTAVGAAMGHDATLFAP LGAIFINLIKMLVIPLVAVALISGAAGLGDSHSAGKVGAVTLSYFAITSAAAVALALIMGELFQPGVGVDVSGVESMFSS EYAAQGELPTFWATIIGMIPTNVFQSLNEANILQILVFCLFLGIAISKQAKEKRDPVINAVNTIVDAMVWMINKVMLIAP IGVFGLMADAVGTFGFSALMVVFKLFVVYVAAIAIFGFVAYPVMIQLFSKTSAKKFIQAMKKPQAVALSTASSMATLPVT MDTVKNDLGVRNSTASFVLPLGATINMSGNAIYYGLVAIFFAQLFNIDLSMGAYIAIIVTATLGAVGQAGVPGPSFLVVA VLLSAGIPIEGLPLLFALDRIFDMIRTALNITGDAACAVIVDSMITEEAAAELEKREA >Mature_458_residues MCLLLNVNIPCKKQEQNFCPFSDMTLVANTRNLQFISTEVMEVLKTKGLLNNIGVQVVIAMLAGTAVGAAMGHDATLFAP LGAIFINLIKMLVIPLVAVALISGAAGLGDSHSAGKVGAVTLSYFAITSAAAVALALIMGELFQPGVGVDVSGVESMFSS EYAAQGELPTFWATIIGMIPTNVFQSLNEANILQILVFCLFLGIAISKQAKEKRDPVINAVNTIVDAMVWMINKVMLIAP IGVFGLMADAVGTFGFSALMVVFKLFVVYVAAIAIFGFVAYPVMIQLFSKTSAKKFIQAMKKPQAVALSTASSMATLPVT MDTVKNDLGVRNSTASFVLPLGATINMSGNAIYYGLVAIFFAQLFNIDLSMGAYIAIIVTATLGAVGQAGVPGPSFLVVA VLLSAGIPIEGLPLLFALDRIFDMIRTALNITGDAACAVIVDSMITEEAAAELEKREA
Specific function: This carrier protein is part of the Na(+)-independent, binding-protein-independent glutamate-aspartate transport system [H]
COG id: COG1301
COG function: function code C; Na+/H+-dicarboxylate symporters
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sodium:dicarboxylate (SDF) symporter (TC 2.A.23) family [H]
Homologues:
Organism=Homo sapiens, GI21314632, Length=420, Percent_Identity=29.2857142857143, Blast_Score=169, Evalue=7e-42, Organism=Homo sapiens, GI169790839, Length=462, Percent_Identity=27.9220779220779, Blast_Score=152, Evalue=5e-37, Organism=Homo sapiens, GI66773030, Length=423, Percent_Identity=29.3144208037825, Blast_Score=146, Evalue=3e-35, Organism=Homo sapiens, GI5032093, Length=394, Percent_Identity=30.7106598984772, Blast_Score=143, Evalue=3e-34, Organism=Homo sapiens, GI223468566, Length=277, Percent_Identity=32.4909747292419, Blast_Score=136, Evalue=4e-32, Organism=Homo sapiens, GI223468564, Length=269, Percent_Identity=32.7137546468402, Blast_Score=135, Evalue=1e-31, Organism=Homo sapiens, GI4827012, Length=284, Percent_Identity=32.0422535211268, Blast_Score=132, Evalue=5e-31, Organism=Homo sapiens, GI194239697, Length=441, Percent_Identity=26.530612244898, Blast_Score=132, Evalue=6e-31, Organism=Homo sapiens, GI40254478, Length=426, Percent_Identity=28.6384976525822, Blast_Score=131, Evalue=1e-30, Organism=Homo sapiens, GI301601644, Length=151, Percent_Identity=39.7350993377483, Blast_Score=111, Evalue=1e-24, Organism=Homo sapiens, GI262359914, Length=381, Percent_Identity=26.509186351706, Blast_Score=108, Evalue=1e-23, Organism=Escherichia coli, GI1790514, Length=409, Percent_Identity=35.4523227383863, Blast_Score=236, Evalue=2e-63, Organism=Escherichia coli, GI1789947, Length=420, Percent_Identity=30, Blast_Score=182, Evalue=3e-47, Organism=Escherichia coli, GI1788024, Length=396, Percent_Identity=26.2626262626263, Blast_Score=100, Evalue=3e-22, Organism=Escherichia coli, GI1789473, Length=277, Percent_Identity=29.2418772563177, Blast_Score=94, Evalue=3e-20, Organism=Caenorhabditis elegans, GI17537407, Length=420, Percent_Identity=29.5238095238095, Blast_Score=171, Evalue=6e-43, Organism=Caenorhabditis elegans, GI71983099, Length=404, Percent_Identity=29.7029702970297, Blast_Score=167, Evalue=7e-42, Organism=Caenorhabditis elegans, GI71983106, Length=420, Percent_Identity=29.0476190476191, Blast_Score=167, Evalue=8e-42, Organism=Caenorhabditis elegans, GI193206505, Length=412, Percent_Identity=29.3689320388349, Blast_Score=167, Evalue=1e-41, Organism=Caenorhabditis elegans, GI193206654, Length=408, Percent_Identity=30.8823529411765, Blast_Score=164, Evalue=7e-41, Organism=Caenorhabditis elegans, GI71996953, Length=423, Percent_Identity=26.9503546099291, Blast_Score=151, Evalue=8e-37, Organism=Caenorhabditis elegans, GI17541374, Length=419, Percent_Identity=30.0715990453461, Blast_Score=151, Evalue=9e-37, Organism=Drosophila melanogaster, GI24583025, Length=413, Percent_Identity=26.3922518159806, Blast_Score=135, Evalue=6e-32, Organism=Drosophila melanogaster, GI17137668, Length=413, Percent_Identity=26.3922518159806, Blast_Score=135, Evalue=6e-32, Organism=Drosophila melanogaster, GI24583023, Length=413, Percent_Identity=26.3922518159806, Blast_Score=135, Evalue=6e-32, Organism=Drosophila melanogaster, GI281360483, Length=437, Percent_Identity=27.0022883295195, Blast_Score=103, Evalue=2e-22, Organism=Drosophila melanogaster, GI17137666, Length=437, Percent_Identity=27.0022883295195, Blast_Score=103, Evalue=2e-22, Organism=Drosophila melanogaster, GI281360481, Length=437, Percent_Identity=27.0022883295195, Blast_Score=103, Evalue=2e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001991 - InterPro: IPR018107 [H]
Pfam domain/function: PF00375 SDF [H]
EC number: NA
Molecular weight: Translated: 48130; Mature: 48130
Theoretical pI: Translated: 4.95; Mature: 4.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCLLLNVNIPCKKQEQNFCPFSDMTLVANTRNLQFISTEVMEVLKTKGLLNNIGVQVVIA CEEEEECCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHH MLAGTAVGAAMGHDATLFAPLGAIFINLIKMLVIPLVAVALISGAAGLGDSHSAGKVGAV HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHH TLSYFAITSAAAVALALIMGELFQPGVGVDVSGVESMFSSEYAAQGELPTFWATIIGMIP HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH TNVFQSLNEANILQILVFCLFLGIAISKQAKEKRDPVINAVNTIVDAMVWMINKVMLIAP HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IGVFGLMADAVGTFGFSALMVVFKLFVVYVAAIAIFGFVAYPVMIQLFSKTSAKKFIQAM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KKPQAVALSTASSMATLPVTMDTVKNDLGVRNSTASFVLPLGATINMSGNAIYYGLVAIF CCCCCEEEECCCCCEECCEEHHHHHHHCCCCCCCCCEEEECCCEEECCCCHHHHHHHHHH FAQLFNIDLSMGAYIAIIVTATLGAVGQAGVPGPSFLVVAVLLSAGIPIEGLPLLFALDR HHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHH IFDMIRTALNITGDAACAVIVDSMITEEAAAELEKREA HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MCLLLNVNIPCKKQEQNFCPFSDMTLVANTRNLQFISTEVMEVLKTKGLLNNIGVQVVIA CEEEEECCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHH MLAGTAVGAAMGHDATLFAPLGAIFINLIKMLVIPLVAVALISGAAGLGDSHSAGKVGAV HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHH TLSYFAITSAAAVALALIMGELFQPGVGVDVSGVESMFSSEYAAQGELPTFWATIIGMIP HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH TNVFQSLNEANILQILVFCLFLGIAISKQAKEKRDPVINAVNTIVDAMVWMINKVMLIAP HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IGVFGLMADAVGTFGFSALMVVFKLFVVYVAAIAIFGFVAYPVMIQLFSKTSAKKFIQAM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KKPQAVALSTASSMATLPVTMDTVKNDLGVRNSTASFVLPLGATINMSGNAIYYGLVAIF CCCCCEEEECCCCCEECCEEHHHHHHHCCCCCCCCCEEEECCCEEECCCCHHHHHHHHHH FAQLFNIDLSMGAYIAIIVTATLGAVGQAGVPGPSFLVVAVLLSAGIPIEGLPLLFALDR HHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHH IFDMIRTALNITGDAACAVIVDSMITEEAAAELEKREA HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: L-aspartate [Periplasm]; Proton [Periplasm]; L-glutamate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + L-aspartate [Periplasm] = Proton [Cytoplasm] + L-aspartate [Cytoplasm] Proton [Periplasm] + L-glutamate [Periplasm] = Proton [Cytoplasm] + L-glutamate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1971622; 1551855; 8265357; 9278503 [H]