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The map label for this gene is yfbV [C]

Identifier: 227081272

GI number: 227081272

Start: 1126728

End: 1127186

Strand: Direct

Name: yfbV [C]

Synonym: VCM66_1055

Alternate gene names: 227081272

Gene position: 1126728-1127186 (Clockwise)

Preceding gene: 227081269

Following gene: 227081274

Centisome position: 38.95

GC content: 49.89

Gene sequence:

>459_bases
GTGGATATGAATAATAAAGTCGGCATAGTGCATAGCCTAAAAGATGGCCAGAAGTACATGGATATTTGGCCGATGCGCAA
AGAGTTAAATCCACTGTTCCCTGAGCAACGCGTGATTAAAGCCACACGCTTTGCGATTAAAGTGATGCCTGCGGTTGCGG
CGATCAGCGTGCTGACACAAATGGTGTTTGCCAACACGCAGGCCATGCCTCAGGCGATTGTGGTCGCTTTATTTGCTATG
AGCTTGCCACTGCAAGGCATTTGGTGGCTCGGTCACCGTGCCAATACCCAACTACCTCCGGCGCTTGCGAGCTGGTATCG
CGAACTCTATATGAAGATCGTCGAAACTGGTTTTGCACTGGAGCCGATCAAAAGCAAACCGCGCTATAAAGAGCTCGCGC
AAGTGTTGAATCGTGCGTTTCGACAACTGGATGATACTGCGCTAGAACGCTGGTTTTAA

Upstream 100 bases:

>100_bases
AAAAAAAATTTGAATCAATATTAGCTTTTGTCAAATTTTTGCGTCTTTTGTTGAATCATTCAACTAAATTTTAGTGGGTT
GAGCAAAGAGCAGCGAGGAA

Downstream 100 bases:

>100_bases
GGCTACCGAGTAGGCTATTTGTCCCATCAGTGTGACCAACGAATATCGAATAGCATATCGAATCGTTGGTCACAGAAACT
TGCCGCGTGCCAAGGCAACC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 152; Mature: 152

Protein sequence:

>152_residues
MDMNNKVGIVHSLKDGQKYMDIWPMRKELNPLFPEQRVIKATRFAIKVMPAVAAISVLTQMVFANTQAMPQAIVVALFAM
SLPLQGIWWLGHRANTQLPPALASWYRELYMKIVETGFALEPIKSKPRYKELAQVLNRAFRQLDDTALERWF

Sequences:

>Translated_152_residues
MDMNNKVGIVHSLKDGQKYMDIWPMRKELNPLFPEQRVIKATRFAIKVMPAVAAISVLTQMVFANTQAMPQAIVVALFAM
SLPLQGIWWLGHRANTQLPPALASWYRELYMKIVETGFALEPIKSKPRYKELAQVLNRAFRQLDDTALERWF
>Mature_152_residues
MDMNNKVGIVHSLKDGQKYMDIWPMRKELNPLFPEQRVIKATRFAIKVMPAVAAISVLTQMVFANTQAMPQAIVVALFAM
SLPLQGIWWLGHRANTQLPPALASWYRELYMKIVETGFALEPIKSKPRYKELAQVLNRAFRQLDDTALERWF

Specific function: Unknown

COG id: COG3092

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0208 family [H]

Homologues:

Organism=Escherichia coli, GI1788632, Length=146, Percent_Identity=45.8904109589041, Blast_Score=135, Evalue=8e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007334 [H]

Pfam domain/function: PF04217 DUF412 [H]

EC number: NA

Molecular weight: Translated: 17518; Mature: 17518

Theoretical pI: Translated: 10.46; Mature: 10.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.9 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.9 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDMNNKVGIVHSLKDGQKYMDIWPMRKELNPLFPEQRVIKATRFAIKVMPAVAAISVLTQ
CCCCCCCCCEECCCCCHHHHHHHCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
MVFANTQAMPQAIVVALFAMSLPLQGIWWLGHRANTQLPPALASWYRELYMKIVETGFAL
HHHHCHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC
EPIKSKPRYKELAQVLNRAFRQLDDTALERWF
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDMNNKVGIVHSLKDGQKYMDIWPMRKELNPLFPEQRVIKATRFAIKVMPAVAAISVLTQ
CCCCCCCCCEECCCCCHHHHHHHCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
MVFANTQAMPQAIVVALFAMSLPLQGIWWLGHRANTQLPPALASWYRELYMKIVETGFAL
HHHHCHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC
EPIKSKPRYKELAQVLNRAFRQLDDTALERWF
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]