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The map label for this gene is atoS [C]

Identifier: 227081261

GI number: 227081261

Start: 1113062

End: 1114666

Strand: Reverse

Name: atoS [C]

Synonym: VCM66_1044

Alternate gene names: 227081261

Gene position: 1114666-1113062 (Counterclockwise)

Preceding gene: 227081262

Following gene: 227081253

Centisome position: 38.54

GC content: 45.48

Gene sequence:

>1605_bases
ATGTCGATACGCTTAAAGACCATGCTTGGTGTGGCGTTGATCGAAGCTTTGTTGCTGACGATTTTGATCACCTTCACCCT
AAGCTATCTTGAGTCCACCAACTATGATGGATTACAAAAGCGCGCCCAAACGACCATTGCTCTATTTGCCACTATGGTGA
AAAATCCAGTACTGGCTTACGATCTGGCCAGTATCGATTCTGCCGCCACGTTAATGATGTCCAATCAAGACATCGTCTAT
GTCGCGGTCGAAAATCCCCATGGAAAACTCTTAACCTTTAAAGGCAACCGCGATTTATTCGAGGCTTACCATACGATTAA
CGATCAAGATTTTTCTAAACTCCAATCCATCTATCCCATCACCGATGTTATTGAGGTGAGCGGCACTCTGTTTGGTACCG
TATTTATCGGCTTTGATCTCTCTTATCTCGAGCAACAACTCGCTCACGCCCGTAAATGGACACTACTGATTGTGCTAGGG
GAAATGGGCTTAGTCGCCCTGTTCTCTTACTTGTTGGGGAATGCCTTAACCCGACGTTTAACGGAACTCAAAACCGCAAC
CGATCAAATCACCTTCGGCAATCGTGAAGTCCTGCTTGAAATCCAAGGTCATGATGAAATCAGTCGCGTCGCCCACTCTT
TTCAACAAATGGTGCAATCGCTGCGCCATTCAGAAGCGACCATGCGAGATTACCAACATCAACTTGAGCAGTGGAATTTG
GAGCTTGAAGATAAGGTTAACCAGCGTACGGAAACCCTACTCGCAAAAAATCAGCAACTGGAAGAGATGAATACTAAGCT
CACTTTAATGAAAGATAAGCTGGTTGAAACCGAGAAAATGATTTCGATTGGTACACTGGCTGCAGGCTTTGCTCATGAGA
TTAACAACCCTAATGGCGCACTGAAAAGCCACTTGCAGCTACTCCAACAAGACTTTAATCAACTTAAGGTGGGATTTGAA
CAGATTGATATTCTGCTAAGCGGAAGTGATTTTCATGGCAAGTTCACCCAAACCAAAAATGCGCTTTATCTCGAAGAGAG
TTTTTCAGGGATTGAGGAAAGCCTTAGGGATGCGCTGCACTGTGTTGACCGAATAAAAACGATTGTCGATAAAGTTCAGC
GTTGCCAAGCCGAACCCGCGCTCCATGACAGCAGTTGGGTTTCTCCACTCAGCTTAGTGGAACAAGCCATTCAAATTTGC
GGATTACGAGAGTGGGTAGTCTGGAAAGAACAAACCCTCTATCCACCGTTGATTTATTGCTACAGCAACGATTTCGTGAC
CGCGTTGAGTGCGATTTTAAATAACGCCTATCAAGCTTACGCCTCCGATGACCCAATGATCCGTATCGAACTTTCGCTGC
GTCATGATCATCAACAGTTAGAAATTGAGGTGCGCGATTTTGGTCGCGGTATGAGTATCGAAGAAAAACAGCACGCTTTT
GACCCCTTCTTTACCACTCATGATGTGGGTAAAGGCGTAGGCCTCGGTTTAACCGAGGCCTACAGCAGCATCAAAAAATA
CGATGGCGACATACAACTCTTTAGTGAACTAGGACAAGGCACCCGAGTGTTAATTACTCTACCGTTAGCCCCCAACAAAC
CGTAA

Upstream 100 bases:

>100_bases
GATTGGGTTTTCCGGCATTGAAGCCGCTCGAGACAGTGATTGGGACGACATCCGTGAATTAGATATCCAAACCCTCTCTC
ATCTGCTTAAGGAATAAGCG

Downstream 100 bases:

>100_bases
CGACCTGACGAATCCTTATCCTGTGTCCTTATCCTATATAAACGGGGATCGGCATATTCATCTCTTGTTCTAACTCTTTG
AGTTTACGTAATAAAGGCTC

Product: sensor histidine kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 534; Mature: 533

Protein sequence:

>534_residues
MSIRLKTMLGVALIEALLLTILITFTLSYLESTNYDGLQKRAQTTIALFATMVKNPVLAYDLASIDSAATLMMSNQDIVY
VAVENPHGKLLTFKGNRDLFEAYHTINDQDFSKLQSIYPITDVIEVSGTLFGTVFIGFDLSYLEQQLAHARKWTLLIVLG
EMGLVALFSYLLGNALTRRLTELKTATDQITFGNREVLLEIQGHDEISRVAHSFQQMVQSLRHSEATMRDYQHQLEQWNL
ELEDKVNQRTETLLAKNQQLEEMNTKLTLMKDKLVETEKMISIGTLAAGFAHEINNPNGALKSHLQLLQQDFNQLKVGFE
QIDILLSGSDFHGKFTQTKNALYLEESFSGIEESLRDALHCVDRIKTIVDKVQRCQAEPALHDSSWVSPLSLVEQAIQIC
GLREWVVWKEQTLYPPLIYCYSNDFVTALSAILNNAYQAYASDDPMIRIELSLRHDHQQLEIEVRDFGRGMSIEEKQHAF
DPFFTTHDVGKGVGLGLTEAYSSIKKYDGDIQLFSELGQGTRVLITLPLAPNKP

Sequences:

>Translated_534_residues
MSIRLKTMLGVALIEALLLTILITFTLSYLESTNYDGLQKRAQTTIALFATMVKNPVLAYDLASIDSAATLMMSNQDIVY
VAVENPHGKLLTFKGNRDLFEAYHTINDQDFSKLQSIYPITDVIEVSGTLFGTVFIGFDLSYLEQQLAHARKWTLLIVLG
EMGLVALFSYLLGNALTRRLTELKTATDQITFGNREVLLEIQGHDEISRVAHSFQQMVQSLRHSEATMRDYQHQLEQWNL
ELEDKVNQRTETLLAKNQQLEEMNTKLTLMKDKLVETEKMISIGTLAAGFAHEINNPNGALKSHLQLLQQDFNQLKVGFE
QIDILLSGSDFHGKFTQTKNALYLEESFSGIEESLRDALHCVDRIKTIVDKVQRCQAEPALHDSSWVSPLSLVEQAIQIC
GLREWVVWKEQTLYPPLIYCYSNDFVTALSAILNNAYQAYASDDPMIRIELSLRHDHQQLEIEVRDFGRGMSIEEKQHAF
DPFFTTHDVGKGVGLGLTEAYSSIKKYDGDIQLFSELGQGTRVLITLPLAPNKP
>Mature_533_residues
SIRLKTMLGVALIEALLLTILITFTLSYLESTNYDGLQKRAQTTIALFATMVKNPVLAYDLASIDSAATLMMSNQDIVYV
AVENPHGKLLTFKGNRDLFEAYHTINDQDFSKLQSIYPITDVIEVSGTLFGTVFIGFDLSYLEQQLAHARKWTLLIVLGE
MGLVALFSYLLGNALTRRLTELKTATDQITFGNREVLLEIQGHDEISRVAHSFQQMVQSLRHSEATMRDYQHQLEQWNLE
LEDKVNQRTETLLAKNQQLEEMNTKLTLMKDKLVETEKMISIGTLAAGFAHEINNPNGALKSHLQLLQQDFNQLKVGFEQ
IDILLSGSDFHGKFTQTKNALYLEESFSGIEESLRDALHCVDRIKTIVDKVQRCQAEPALHDSSWVSPLSLVEQAIQICG
LREWVVWKEQTLYPPLIYCYSNDFVTALSAILNNAYQAYASDDPMIRIELSLRHDHQQLEIEVRDFGRGMSIEEKQHAFD
PFFTTHDVGKGVGLGLTEAYSSIKKYDGDIQLFSELGQGTRVLITLPLAPNKP

Specific function: Member Of The Two-Component Regulatory System Atos/Atoc; May Activate Atoc By Phosphorylation. [C]

COG id: COG0642

COG function: function code T; Signal transduction histidine kinase

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR001638
- InterPro:   IPR004358
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082 [H]

Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF00497 SBP_bac_3 [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 60375; Mature: 60244

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: PS50885 HAMP ; PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIRLKTMLGVALIEALLLTILITFTLSYLESTNYDGLQKRAQTTIALFATMVKNPVLAY
CCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCEE
DLASIDSAATLMMSNQDIVYVAVENPHGKLLTFKGNRDLFEAYHTINDQDFSKLQSIYPI
EHHHCCCHHEEEECCCCEEEEEEECCCCCEEEEECCHHHHHHHHHCCCHHHHHHHHHCCH
TDVIEVSGTLFGTVFIGFDLSYLEQQLAHARKWTLLIVLGEMGLVALFSYLLGNALTRRL
HHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHCEEEEEEECHHHHHHHHHHHHHHHHHHHH
TELKTATDQITFGNREVLLEIQGHDEISRVAHSFQQMVQSLRHSEATMRDYQHQLEQWNL
HHHHHHHCCEEECCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
ELEDKVNQRTETLLAKNQQLEEMNTKLTLMKDKLVETEKMISIGTLAAGFAHEINNPNGA
CHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
LKSHLQLLQQDFNQLKVGFEQIDILLSGSDFHGKFTQTKNALYLEESFSGIEESLRDALH
HHHHHHHHHHHHHHHHCCHHHEEEEEECCCCCCCEECCCCEEEEHHHHHHHHHHHHHHHH
CVDRIKTIVDKVQRCQAEPALHDSSWVSPLSLVEQAIQICGLREWVVWKEQTLYPPLIYC
HHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHEECCCCCCCCEEEE
YSNDFVTALSAILNNAYQAYASDDPMIRIELSLRHDHQQLEIEVRDFGRGMSIEEKQHAF
ECCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCEEEEHHHCCCCCCCCHHHHCC
DPFFTTHDVGKGVGLGLTEAYSSIKKYDGDIQLFSELGQGTRVLITLPLAPNKP
CCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHCCCCCEEEEEEECCCCCC
>Mature Secondary Structure 
SIRLKTMLGVALIEALLLTILITFTLSYLESTNYDGLQKRAQTTIALFATMVKNPVLAY
CEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCEE
DLASIDSAATLMMSNQDIVYVAVENPHGKLLTFKGNRDLFEAYHTINDQDFSKLQSIYPI
EHHHCCCHHEEEECCCCEEEEEEECCCCCEEEEECCHHHHHHHHHCCCHHHHHHHHHCCH
TDVIEVSGTLFGTVFIGFDLSYLEQQLAHARKWTLLIVLGEMGLVALFSYLLGNALTRRL
HHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHCEEEEEEECHHHHHHHHHHHHHHHHHHHH
TELKTATDQITFGNREVLLEIQGHDEISRVAHSFQQMVQSLRHSEATMRDYQHQLEQWNL
HHHHHHHCCEEECCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
ELEDKVNQRTETLLAKNQQLEEMNTKLTLMKDKLVETEKMISIGTLAAGFAHEINNPNGA
CHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
LKSHLQLLQQDFNQLKVGFEQIDILLSGSDFHGKFTQTKNALYLEESFSGIEESLRDALH
HHHHHHHHHHHHHHHHCCHHHEEEEEECCCCCCCEECCCCEEEEHHHHHHHHHHHHHHHH
CVDRIKTIVDKVQRCQAEPALHDSSWVSPLSLVEQAIQICGLREWVVWKEQTLYPPLIYC
HHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHEECCCCCCCCEEEE
YSNDFVTALSAILNNAYQAYASDDPMIRIELSLRHDHQQLEIEVRDFGRGMSIEEKQHAF
ECCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCEEEEHHHCCCCCCCCHHHHCC
DPFFTTHDVGKGVGLGLTEAYSSIKKYDGDIQLFSELGQGTRVLITLPLAPNKP
CCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHCCCCCEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1333793 [H]