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The map label for this gene is ybcL [H]

Identifier: 227081249

GI number: 227081249

Start: 1101552

End: 1102094

Strand: Direct

Name: ybcL [H]

Synonym: VCM66_1031

Alternate gene names: 227081249

Gene position: 1101552-1102094 (Clockwise)

Preceding gene: 227081247

Following gene: 227081250

Centisome position: 38.08

GC content: 50.64

Gene sequence:

>543_bases
ATGAAAGCACGTCATCTTTTACCTGTACTCGCCGCCGCGATCACTTTTCCTGCGCTGAGCAGCCCTGTCATGACGCTCAC
TAGCCAAGACATTCAAGAAGGTTCACGAATGGCGAAGCATTTTGTGTTTAATGGTTTTGGTTGTAGCGGTGATAATTTGT
CGCCACAACTGAGCTGGAACAATGCCCCGAAAGGCACCAAAAGTTTTGCCATTACCGCTTATGACCCCGATGCACCGACT
GGCAGTGGTTGGTGGCACTGGGTAGCACTGGATATCGCGGCGGATCAACATAATGTGGCGCGTGGCGCAGCTAAGCAACT
TAAAGGCGTACGTGAACTGAACAACGATTACGGCTTTAGCGGCTTTGGTGGTGCGTGCCCTCCACAAGGTCACGGTATGC
ACCGTTATCAATTTACGGTTTGGGCACTCCCGTTTGAAAAAATGGAGATCCCACAAGGGGCTTCTAATGCTTTAGTGGGT
TTTATGCTGCGCGCTAATGCGCTTGAGCAGGCCACGCTAACCGCAACCTATGTGAATGAATAA

Upstream 100 bases:

>100_bases
CAAAAGTAACGAATCTTGAGTGTTTTTTGAGTTTTATTGTTGCTTATTGAGTGATTGAAGAAGGTAAATTATTCACGTCA
ACTTAACGAGGAGAATCTCA

Downstream 100 bases:

>100_bases
TAAGGAAGAGAAATGAGCAAAGTGATCGTGCAGACTGGGCAGTTTAAAGGTTTGCGTAAACAGCCTCTGCATAATGTCTT
GATCTATGCGCCCACCATTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 180; Mature: 180

Protein sequence:

>180_residues
MKARHLLPVLAAAITFPALSSPVMTLTSQDIQEGSRMAKHFVFNGFGCSGDNLSPQLSWNNAPKGTKSFAITAYDPDAPT
GSGWWHWVALDIAADQHNVARGAAKQLKGVRELNNDYGFSGFGGACPPQGHGMHRYQFTVWALPFEKMEIPQGASNALVG
FMLRANALEQATLTATYVNE

Sequences:

>Translated_180_residues
MKARHLLPVLAAAITFPALSSPVMTLTSQDIQEGSRMAKHFVFNGFGCSGDNLSPQLSWNNAPKGTKSFAITAYDPDAPT
GSGWWHWVALDIAADQHNVARGAAKQLKGVRELNNDYGFSGFGGACPPQGHGMHRYQFTVWALPFEKMEIPQGASNALVG
FMLRANALEQATLTATYVNE
>Mature_180_residues
MKARHLLPVLAAAITFPALSSPVMTLTSQDIQEGSRMAKHFVFNGFGCSGDNLSPQLSWNNAPKGTKSFAITAYDPDAPT
GSGWWHWVALDIAADQHNVARGAAKQLKGVRELNNDYGFSGFGGACPPQGHGMHRYQFTVWALPFEKMEIPQGASNALVG
FMLRANALEQATLTATYVNE

Specific function: Unknown

COG id: COG1881

COG function: function code R; Phospholipid-binding protein

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0098 family [H]

Homologues:

Organism=Escherichia coli, GI1786757, Length=177, Percent_Identity=46.3276836158192, Blast_Score=170, Evalue=5e-44,
Organism=Escherichia coli, GI1786990, Length=158, Percent_Identity=46.2025316455696, Blast_Score=157, Evalue=3e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008914
- InterPro:   IPR005247 [H]

Pfam domain/function: PF01161 PBP [H]

EC number: NA

Molecular weight: Translated: 19467; Mature: 19467

Theoretical pI: Translated: 7.67; Mature: 7.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKARHLLPVLAAAITFPALSSPVMTLTSQDIQEGSRMAKHFVFNGFGCSGDNLSPQLSWN
CCCHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCC
NAPKGTKSFAITAYDPDAPTGSGWWHWVALDIAADQHNVARGAAKQLKGVRELNNDYGFS
CCCCCCCEEEEEEECCCCCCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCC
GFGGACPPQGHGMHRYQFTVWALPFEKMEIPQGASNALVGFMLRANALEQATLTATYVNE
CCCCCCCCCCCCCEEEEEEEEECCHHHHCCCCCCCHHHHHHHHHHCCCCCCEEEEEEECC
>Mature Secondary Structure
MKARHLLPVLAAAITFPALSSPVMTLTSQDIQEGSRMAKHFVFNGFGCSGDNLSPQLSWN
CCCHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCC
NAPKGTKSFAITAYDPDAPTGSGWWHWVALDIAADQHNVARGAAKQLKGVRELNNDYGFS
CCCCCCCEEEEEEECCCCCCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCC
GFGGACPPQGHGMHRYQFTVWALPFEKMEIPQGASNALVGFMLRANALEQATLTATYVNE
CCCCCCCCCCCCCEEEEEEEEECCHHHHCCCCCCCHHHHHHHHHHCCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 11439028 [H]