| Definition | Vibrio cholerae M66-2 chromosome I, complete genome. |
|---|---|
| Accession | NC_012578 |
| Length | 2,892,523 |
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The map label for this gene is 227081181
Identifier: 227081181
GI number: 227081181
Start: 1035600
End: 1035743
Strand: Reverse
Name: 227081181
Synonym: VCM66_0963
Alternate gene names: NA
Gene position: 1035743-1035600 (Counterclockwise)
Preceding gene: 227081183
Following gene: 227081180
Centisome position: 35.81
GC content: 43.06
Gene sequence:
>144_bases TTGGTGGAGATGATGCAAAAATCTAGCCAGCACGATACTGGCATGACGGTACCCAAACAACTTGCTTGCCGCAAAACAGC CTTGAATGAATCCCTTTCAACCTTATCGCTTCTCTTTATTGAACAATTAATTGCCGCGATTTAG
Upstream 100 bases:
>100_bases TGCTTATGGCAAACAAACTTGTGATAACCCATTTATTCATAAATACTTTTTCTCACTACTGATACTGCATGCTCAGGCGA TAATTTGCCGCCTGCGAGAC
Downstream 100 bases:
>100_bases ATAAGCTAGGTTTTGCTCTACCGCAGAATCTGCAATAATGCCAGCCTTATCACACAATTTAGAACCCGCATGACTGATAA AAATGACGCGCTAACCTTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 47; Mature: 47
Protein sequence:
>47_residues MVEMMQKSSQHDTGMTVPKQLACRKTALNESLSTLSLLFIEQLIAAI
Sequences:
>Translated_47_residues MVEMMQKSSQHDTGMTVPKQLACRKTALNESLSTLSLLFIEQLIAAI >Mature_47_residues MVEMMQKSSQHDTGMTVPKQLACRKTALNESLSTLSLLFIEQLIAAI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5208; Mature: 5208
Theoretical pI: Translated: 7.37; Mature: 7.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 8.5 %Met (Translated Protein) 10.6 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 8.5 %Met (Mature Protein) 10.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVEMMQKSSQHDTGMTVPKQLACRKTALNESLSTLSLLFIEQLIAAI CCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure MVEMMQKSSQHDTGMTVPKQLACRKTALNESLSTLSLLFIEQLIAAI CCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA