Definition Vibrio cholerae M66-2 chromosome I, complete genome.
Accession NC_012578
Length 2,892,523

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The map label for this gene is 227081109

Identifier: 227081109

GI number: 227081109

Start: 958126

End: 959322

Strand: Direct

Name: 227081109

Synonym: VCM66_0891

Alternate gene names: NA

Gene position: 958126-959322 (Clockwise)

Preceding gene: 227081108

Following gene: 227081110

Centisome position: 33.12

GC content: 47.54

Gene sequence:

>1197_bases
ATGGAACCGATTAAACTGACTTCTCTTTTTTCAGCCAGCTTGGTCACGCTGGGTGTGACTTATGCGCCATTAGGGGTTGC
GAAGCCAACGCCGAATCCTATCGTGACGGAATCTGGGATGGCGGTAGTGCCGTTTCTTAATCTTTCGACGGGCTATAACG
ATAACTTGGCCAAATCAAACCAGCAGCAAGACAGCTCGGCCTTCTCGGTGATTGAATCGGGAGTCGGTTTTATAGTCGAG
CCGCAAAGCAGTAAAACCCAATTGGGATACCGTTTTCGCAACGGAACGTATTTTAGTTCTCAACAAGATAACTTTACCGA
TCACTACCTTGATCTGACCAGTGATTGGGAATTGAACTCCCGCCACCGCATTGGGTTTGAGTATAACTTAGCCTTAGCCC
ATGAAGGCCGTGGCGAGAACGATACGACACTCGGGCTTGATTACAACCAATATGAGAGCCACAGTGCCAATCTTGGGTAT
GGTTTTGGTTCAACAGAAGCGATTGGTCGGATTGAAACCAATATCGGTTGGCAAGATTTTACTTATCAAAATAACCGCAC
CATTACTCAATATCAGGATTGGGATGAGCTGCGCTTTAACTCCACTTTTTATTATCAGGCATTACCGCGCACCTCGTTTA
TCGCGCAAGTGATTGCTAACTCTCGTCGTTATGACCTGATCGCACCGGGAGCCAGCAGCAAAGATAATAATCACTACTTT
GGTTATCTCGGTGCTTCTTGGGATGCCACAGGTAAGTTGCGAGGCAACGCAAAGCTTGGTTACCAGCAAAAAGATTTTGA
TGCAGCCAGCCGTAAAGACTTTGACTCTTTCTCATGGGATGTGGATGTGACTTATCTGGTTCGCACCTACTCAGCGCTCC
AACTGGTGACCAATCGACGTTCGACCGACTCTGATGGCGATGGTGACGCGATTGACGCAGCGACCTATCAAGTCAACTGG
TCACACAATTGGAATACCCAATGGACGACTGAAGCCGCATTAACGCGTTTAGAGGAAGACTACACGGCATCGAATCGTGA
TGATGAAACGACGAATGCGAGTTTACGTGCCAGCTATGATTTTCGCCGTTGGCTGACCTTTGAGTTGGGTGTAGGACGTG
AGCGGAAAGACTCCAATATCGACTCGTTAAGCTATAGTCAAAATGTGTATTACCTGTCTGTTCAGGGCGTGATGTAA

Upstream 100 bases:

>100_bases
AAAGGATTTGTTGGAAAAAACGCGTATTAAGACAGGGCACTTGCGTCGTAAGTGCGAGTGCTACTCTTGAATAAATATCG
ATTTAAATAAGTGCAGGCAA

Downstream 100 bases:

>100_bases
CCCATGATGAAGTACCTACTCTCTTTTTTGCTGTGCCTATTGGTATGGCCGTCATTGGCTGTCGCCAATGACGATTTTTA
TCGTCTCGGTGTTGGCGATC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 398; Mature: 398

Protein sequence:

>398_residues
MEPIKLTSLFSASLVTLGVTYAPLGVAKPTPNPIVTESGMAVVPFLNLSTGYNDNLAKSNQQQDSSAFSVIESGVGFIVE
PQSSKTQLGYRFRNGTYFSSQQDNFTDHYLDLTSDWELNSRHRIGFEYNLALAHEGRGENDTTLGLDYNQYESHSANLGY
GFGSTEAIGRIETNIGWQDFTYQNNRTITQYQDWDELRFNSTFYYQALPRTSFIAQVIANSRRYDLIAPGASSKDNNHYF
GYLGASWDATGKLRGNAKLGYQQKDFDAASRKDFDSFSWDVDVTYLVRTYSALQLVTNRRSTDSDGDGDAIDAATYQVNW
SHNWNTQWTTEAALTRLEEDYTASNRDDETTNASLRASYDFRRWLTFELGVGRERKDSNIDSLSYSQNVYYLSVQGVM

Sequences:

>Translated_398_residues
MEPIKLTSLFSASLVTLGVTYAPLGVAKPTPNPIVTESGMAVVPFLNLSTGYNDNLAKSNQQQDSSAFSVIESGVGFIVE
PQSSKTQLGYRFRNGTYFSSQQDNFTDHYLDLTSDWELNSRHRIGFEYNLALAHEGRGENDTTLGLDYNQYESHSANLGY
GFGSTEAIGRIETNIGWQDFTYQNNRTITQYQDWDELRFNSTFYYQALPRTSFIAQVIANSRRYDLIAPGASSKDNNHYF
GYLGASWDATGKLRGNAKLGYQQKDFDAASRKDFDSFSWDVDVTYLVRTYSALQLVTNRRSTDSDGDGDAIDAATYQVNW
SHNWNTQWTTEAALTRLEEDYTASNRDDETTNASLRASYDFRRWLTFELGVGRERKDSNIDSLSYSQNVYYLSVQGVM
>Mature_398_residues
MEPIKLTSLFSASLVTLGVTYAPLGVAKPTPNPIVTESGMAVVPFLNLSTGYNDNLAKSNQQQDSSAFSVIESGVGFIVE
PQSSKTQLGYRFRNGTYFSSQQDNFTDHYLDLTSDWELNSRHRIGFEYNLALAHEGRGENDTTLGLDYNQYESHSANLGY
GFGSTEAIGRIETNIGWQDFTYQNNRTITQYQDWDELRFNSTFYYQALPRTSFIAQVIANSRRYDLIAPGASSKDNNHYF
GYLGASWDATGKLRGNAKLGYQQKDFDAASRKDFDSFSWDVDVTYLVRTYSALQLVTNRRSTDSDGDGDAIDAATYQVNW
SHNWNTQWTTEAALTRLEEDYTASNRDDETTNASLRASYDFRRWLTFELGVGRERKDSNIDSLSYSQNVYYLSVQGVM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44992; Mature: 44992

Theoretical pI: Translated: 4.57; Mature: 4.57

Prosite motif: PS00284 SERPIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEPIKLTSLFSASLVTLGVTYAPLGVAKPTPNPIVTESGMAVVPFLNLSTGYNDNLAKSN
CCCEEEHHHHHHHHHHEEEEECCCCCCCCCCCCEEECCCCEEEEEEECCCCCCCCHHCCC
QQQDSSAFSVIESGVGFIVEPQSSKTQLGYRFRNGTYFSSQQDNFTDHYLDLTSDWELNS
CCHHHHHHHHHHCCCCEEECCCCCCCEEEEEEECCEEECCCCCCCCCEEEECCCCCCCCC
RHRIGFEYNLALAHEGRGENDTTLGLDYNQYESHSANLGYGFGSTEAIGRIETNIGWQDF
CEECCEEEEEEEEECCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEE
TYQNNRTITQYQDWDELRFNSTFYYQALPRTSFIAQVIANSRRYDLIAPGASSKDNNHYF
EECCCCEEEEECCCCCEECCCEEEEEECCCHHHHHHHHHCCCCEEEECCCCCCCCCCEEE
GYLGASWDATGKLRGNAKLGYQQKDFDAASRKDFDSFSWDVDVTYLVRTYSALQLVTNRR
EEEECCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHCCC
STDSDGDGDAIDAATYQVNWSHNWNTQWTTEAALTRLEEDYTASNRDDETTNASLRASYD
CCCCCCCCCEEEEEEEEEEECCCCCCCEEHHHHHHHHHHHCCCCCCCCCCCCCEEEECCC
FRRWLTFELGVGRERKDSNIDSLSYSQNVYYLSVQGVM
EEEEEEEEECCCCCCCCCCCCCEEECCCEEEEEEECCC
>Mature Secondary Structure
MEPIKLTSLFSASLVTLGVTYAPLGVAKPTPNPIVTESGMAVVPFLNLSTGYNDNLAKSN
CCCEEEHHHHHHHHHHEEEEECCCCCCCCCCCCEEECCCCEEEEEEECCCCCCCCHHCCC
QQQDSSAFSVIESGVGFIVEPQSSKTQLGYRFRNGTYFSSQQDNFTDHYLDLTSDWELNS
CCHHHHHHHHHHCCCCEEECCCCCCCEEEEEEECCEEECCCCCCCCCEEEECCCCCCCCC
RHRIGFEYNLALAHEGRGENDTTLGLDYNQYESHSANLGYGFGSTEAIGRIETNIGWQDF
CEECCEEEEEEEEECCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEE
TYQNNRTITQYQDWDELRFNSTFYYQALPRTSFIAQVIANSRRYDLIAPGASSKDNNHYF
EECCCCEEEEECCCCCEECCCEEEEEECCCHHHHHHHHHCCCCEEEECCCCCCCCCCEEE
GYLGASWDATGKLRGNAKLGYQQKDFDAASRKDFDSFSWDVDVTYLVRTYSALQLVTNRR
EEEECCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHCCC
STDSDGDGDAIDAATYQVNWSHNWNTQWTTEAALTRLEEDYTASNRDDETTNASLRASYD
CCCCCCCCCEEEEEEEEEEECCCCCCCEEHHHHHHHHHHHCCCCCCCCCCCCCEEEECCC
FRRWLTFELGVGRERKDSNIDSLSYSQNVYYLSVQGVM
EEEEEEEEECCCCCCCCCCCCCEEECCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA