Definition Vibrio cholerae M66-2 chromosome I, complete genome.
Accession NC_012578
Length 2,892,523

Click here to switch to the map view.

The map label for this gene is mshA [H]

Identifier: 227081100

GI number: 227081100

Start: 945328

End: 946425

Strand: Direct

Name: mshA [H]

Synonym: VCM66_0882

Alternate gene names: 227081100

Gene position: 945328-946425 (Clockwise)

Preceding gene: 227081099

Following gene: 227081101

Centisome position: 32.68

GC content: 46.81

Gene sequence:

>1098_bases
TTGTACCATCAAGGATGTACAGTGAGAAAAAACATTAATCTAATGATCGCCACAGATCTGAAAGGACAAGGTGGTGTGGC
AACAGTGGTCTCAACCTACGCTGATTGTGGTTTTCTAGAAGAAAACCACATCAAGTTGATTGCCTCACACTCAAGTTTGG
ACCACGGGCAGAAATGGCGAATGACATTGCGCTTTATGCTTGCACTCTGCCAATTGTTGTACTGCTTTATGCGTTACCGA
GTCGGCATAGTACATATTCACATGTCATCAAGGGGAAGCTATCGACGTAAGTCTGTGATTATTCGTCTAGTTAAGCTTTT
GAAAGGAAAGGTTATTCTGCACTTACATGGCGCCGAGTTTCGTGATTTCTATCGAGATGAGTGCAATATGGTTCAGCAAA
GGCATATTCGACACACTTTTGCTTTGGCGGATCATGTGCTGGTTCTTTCAACTCAATGGCTCGCATGGCTACAAGAGGTC
ATAGGTAGAACACAAGGCGTTTCTGTTCTGTATAACGCCGTACCCAGTTTGGCTTTAGATCGCCACCTTGCTCAACCTGG
CCGTATTGCCTTCCTTGGTCGTTTGGGGACGCGCAAAGGAGTCGGTGATTTGATTCAAGCCTTTGCGTTAGTTAAGCAGC
GCTGCCCAGAAGCACAGCTGTATCTTGCTGGCGATGGTGAGATTGAAACCTATCAAGCGATGGCTGAGCAGCTTGGCTTG
AACGGGTCCGTTCACTGTTTAGGCTGGATAGCTGGCGAAGCTAAGCTCAAATTATTGACCCAAACTGATATTTACTGCTT
ACCCAGTTATAACGAAGGTTTTCCTATGGGCGTTATAGAAGCTATGTCGGCAGGGATTCCCGTCGTCGCAAGTCGAGCGG
GCGGAATTCCTGATGCGATCAGTGATGGTGAGCAAGGTCGTTTAATTGAGGCCGGTGATGTGGTTGCTTTAGCGCAAGCA
CTCGGAGATCTGATTGAACAGCGTGCCGAAAATCAACGTATTGCGACCGCGGCGAAGCAAAAGTTTGCTGAAAACTTCTC
TTTGCAAGCGGTGATCCCGCGTCTACAAACACTTTACGATGAGCTTTTAAAATCATGA

Upstream 100 bases:

>100_bases
TCAGCAATACTCAAGCTCGCTTAGGAAGCTCGCTCAATGTCACGATAGACATAGTGTCAGCACTTGAGCGCACTGCAAAC
GGTAAGATTCGCCAAGCGAT

Downstream 100 bases:

>100_bases
AATCAACGACTGTAGCTGACATTAGCCAATGCTTATTGAATAAAGCTCGTACAGAACAATTCGCAGGATACGATCCTTTT
GATGGGCTCAATTCAAGCTG

Product: putative polysaccharide biosynthesis protein

Products: NA

Alternate protein names: N-acetylglucosamine-inositol-phosphate N-acetylglucosaminyltransferase; GlcNAc-Ins-P N-acetylglucosaminyltransferase [H]

Number of amino acids: Translated: 365; Mature: 365

Protein sequence:

>365_residues
MYHQGCTVRKNINLMIATDLKGQGGVATVVSTYADCGFLEENHIKLIASHSSLDHGQKWRMTLRFMLALCQLLYCFMRYR
VGIVHIHMSSRGSYRRKSVIIRLVKLLKGKVILHLHGAEFRDFYRDECNMVQQRHIRHTFALADHVLVLSTQWLAWLQEV
IGRTQGVSVLYNAVPSLALDRHLAQPGRIAFLGRLGTRKGVGDLIQAFALVKQRCPEAQLYLAGDGEIETYQAMAEQLGL
NGSVHCLGWIAGEAKLKLLTQTDIYCLPSYNEGFPMGVIEAMSAGIPVVASRAGGIPDAISDGEQGRLIEAGDVVALAQA
LGDLIEQRAENQRIATAAKQKFAENFSLQAVIPRLQTLYDELLKS

Sequences:

>Translated_365_residues
MYHQGCTVRKNINLMIATDLKGQGGVATVVSTYADCGFLEENHIKLIASHSSLDHGQKWRMTLRFMLALCQLLYCFMRYR
VGIVHIHMSSRGSYRRKSVIIRLVKLLKGKVILHLHGAEFRDFYRDECNMVQQRHIRHTFALADHVLVLSTQWLAWLQEV
IGRTQGVSVLYNAVPSLALDRHLAQPGRIAFLGRLGTRKGVGDLIQAFALVKQRCPEAQLYLAGDGEIETYQAMAEQLGL
NGSVHCLGWIAGEAKLKLLTQTDIYCLPSYNEGFPMGVIEAMSAGIPVVASRAGGIPDAISDGEQGRLIEAGDVVALAQA
LGDLIEQRAENQRIATAAKQKFAENFSLQAVIPRLQTLYDELLKS
>Mature_365_residues
MYHQGCTVRKNINLMIATDLKGQGGVATVVSTYADCGFLEENHIKLIASHSSLDHGQKWRMTLRFMLALCQLLYCFMRYR
VGIVHIHMSSRGSYRRKSVIIRLVKLLKGKVILHLHGAEFRDFYRDECNMVQQRHIRHTFALADHVLVLSTQWLAWLQEV
IGRTQGVSVLYNAVPSLALDRHLAQPGRIAFLGRLGTRKGVGDLIQAFALVKQRCPEAQLYLAGDGEIETYQAMAEQLGL
NGSVHCLGWIAGEAKLKLLTQTDIYCLPSYNEGFPMGVIEAMSAGIPVVASRAGGIPDAISDGEQGRLIEAGDVVALAQA
LGDLIEQRAENQRIATAAKQKFAENFSLQAVIPRLQTLYDELLKS

Specific function: Catalyzes the transfer of a N-acetyl-glucosamine moiety to 1D-myo-inositol 3-phosphate to produce 1D-myo-inositol 2- acetamido-2-deoxy-glucopyranoside 3-phosphate in the mycothiol biosynthesis pathway [H]

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family. MshA subfamily [H]

Homologues:

Organism=Escherichia coli, GI1788357, Length=307, Percent_Identity=24.7557003257329, Blast_Score=64, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17532709, Length=206, Percent_Identity=29.6116504854369, Blast_Score=71, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296
- InterPro:   IPR017814 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: =2.4.1.250 [H]

Molecular weight: Translated: 40500; Mature: 40500

Theoretical pI: Translated: 8.71; Mature: 8.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYHQGCTVRKNINLMIATDLKGQGGVATVVSTYADCGFLEENHIKLIASHSSLDHGQKWR
CCCCCCEEEECCEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCHHHH
MTLRFMLALCQLLYCFMRYRVGIVHIHMSSRGSYRRKSVIIRLVKLLKGKVILHLHGAEF
HHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEECCCHH
RDFYRDECNMVQQRHIRHTFALADHVLVLSTQWLAWLQEVIGRTQGVSVLYNAVPSLALD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
RHLAQPGRIAFLGRLGTRKGVGDLIQAFALVKQRCPEAQLYLAGDGEIETYQAMAEQLGL
HHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHCC
NGSVHCLGWIAGEAKLKLLTQTDIYCLPSYNEGFPMGVIEAMSAGIPVVASRAGGIPDAI
CCCEEEEEEEECCCEEEEEEECCEEEECCCCCCCCHHHHHHHHCCCCEEECCCCCCCCCC
SDGEQGRLIEAGDVVALAQALGDLIEQRAENQRIATAAKQKFAENFSLQAVIPRLQTLYD
CCCCCCCEEECCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
ELLKS
HHHCC
>Mature Secondary Structure
MYHQGCTVRKNINLMIATDLKGQGGVATVVSTYADCGFLEENHIKLIASHSSLDHGQKWR
CCCCCCEEEECCEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCHHHH
MTLRFMLALCQLLYCFMRYRVGIVHIHMSSRGSYRRKSVIIRLVKLLKGKVILHLHGAEF
HHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEECCCHH
RDFYRDECNMVQQRHIRHTFALADHVLVLSTQWLAWLQEVIGRTQGVSVLYNAVPSLALD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
RHLAQPGRIAFLGRLGTRKGVGDLIQAFALVKQRCPEAQLYLAGDGEIETYQAMAEQLGL
HHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHCC
NGSVHCLGWIAGEAKLKLLTQTDIYCLPSYNEGFPMGVIEAMSAGIPVVASRAGGIPDAI
CCCEEEEEEEECCCEEEEEEECCEEEECCCCCCCCHHHHHHHHCCCCEEECCCCCCCCCC
SDGEQGRLIEAGDVVALAQALGDLIEQRAENQRIATAAKQKFAENFSLQAVIPRLQTLYD
CCCCCCCEEECCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
ELLKS
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA