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The map label for this gene is rpmJ

Identifier: 227081055

GI number: 227081055

Start: 898331

End: 898456

Strand: Direct

Name: rpmJ

Synonym: VCM66_0836

Alternate gene names: 227081055

Gene position: 898331-898456 (Clockwise)

Preceding gene: 227081054

Following gene: 227081056

Centisome position: 31.06

GC content: 46.03

Gene sequence:

>126_bases
ATGAAAGTGCTCAGCTCGCTAAAAAGCGCTAAAAATCGTCACCCAGATTGTCAAATCGTCAAACGCCGTGGCCGTTTGTA
TGTGATCTGCAAATCAAATCCTCGCTTTAAAGCCGTTCAGCGCTAG

Upstream 100 bases:

>100_bases
AATCTCACCCGTTCTATACCGGTAAACAACGTGTGGTACAAAAAGAAGGTCGCGTTGCGAACTTCACTCGTCGTTTCGGT
CAGTTTGCTAAGGAGTCAAA

Downstream 100 bases:

>100_bases
TAGCAAGATTTTTATCTAACCAGATGGTTATTCATGCTCATGATCATCTGGTTATTTTTTATTTTCAGGTTAGAAGTTAT
TCATTTGGATAAATTTTGTA

Product: 50S ribosomal protein L36

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 41; Mature: 41

Protein sequence:

>41_residues
MKVLSSLKSAKNRHPDCQIVKRRGRLYVICKSNPRFKAVQR

Sequences:

>Translated_41_residues
MKVLSSLKSAKNRHPDCQIVKRRGRLYVICKSNPRFKAVQR
>Mature_41_residues
MKVLSSLKSAKNRHPDCQIVKRRGRLYVICKSNPRFKAVQR

Specific function: Unknown

COG id: COG0257

COG function: function code J; Ribosomal protein L36

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L36P family

Homologues:

Organism=Escherichia coli, GI87081713, Length=40, Percent_Identity=87.5, Blast_Score=77, Evalue=3e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL361_VIBC3 (A5F343)

Other databases:

- EMBL:   CP000627
- EMBL:   CP001235
- ProteinModelPortal:   A5F343
- SMR:   A5F343
- STRING:   A5F343
- GenomeReviews:   CP000627_GR
- GenomeReviews:   CP001235_GR
- KEGG:   vco:VC0395_A0403
- eggNOG:   COG0257
- HOGENOM:   HBG734088
- ProtClustDB:   PRK00831
- BioCyc:   VCHO345073:VC0395_A0403-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00251
- InterPro:   IPR000473
- PANTHER:   PTHR18804
- TIGRFAMs:   TIGR01022

Pfam domain/function: PF00444 Ribosomal_L36; SSF57840 Ribosomal_L36

EC number: NA

Molecular weight: Translated: 4813; Mature: 4813

Theoretical pI: Translated: 11.98; Mature: 11.98

Prosite motif: PS00828 RIBOSOMAL_L36

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.9 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
7.3 %Cys+Met (Translated Protein)
4.9 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
7.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVLSSLKSAKNRHPDCQIVKRRGRLYVICKSNPRFKAVQR
CCHHHHHHHHHCCCCCHHHHCCCCCEEEEECCCCCEECCCC
>Mature Secondary Structure
MKVLSSLKSAKNRHPDCQIVKRRGRLYVICKSNPRFKAVQR
CCHHHHHHHHHCCCCCHHHHCCCCCEEEEECCCCCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA