| Definition | Vibrio cholerae M66-2 chromosome I, complete genome. |
|---|---|
| Accession | NC_012578 |
| Length | 2,892,523 |
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The map label for this gene is yaeP [C]
Identifier: 227081048
GI number: 227081048
Start: 894114
End: 894317
Strand: Reverse
Name: yaeP [C]
Synonym: VCM66_0829
Alternate gene names: 227081048
Gene position: 894317-894114 (Counterclockwise)
Preceding gene: 227081049
Following gene: 227081047
Centisome position: 30.92
GC content: 48.04
Gene sequence:
>204_bases ATGAAAGTTTATGACTGTTGTGAACTGGTACGCGAGCTTTATGCGCAAATTGGTAGTGGTGATCAAGGCTATATTCCGCA AGCTATCAGCTGCGCTGTACGTGCATTAAACGAGATTGCGGCTGATACCGCCCTGCCACTGGCGGCACGAGAAAAAGCGG CGTTTGCGGCAGCGAATTTACTGATTTCCGATTTTGAGGATTAA
Upstream 100 bases:
>100_bases CACCACTCATGAGGCTTCATTGAGCCAGCGCAAGTAGTAGGTTTGGTATTTCTCTGCTCTCAAGGTATATTGAGAGCAGT TATCATTTGAGGACACCCTG
Downstream 100 bases:
>100_bases TCACCATGAATCTCGCGAATTTTGCCACTATGGATCCGATCATGCTGATGAGCATCATTAACATGAAACTGCGTGACGAC TTTGGTGGCGATTTGGATAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 67; Mature: 67
Protein sequence:
>67_residues MKVYDCCELVRELYAQIGSGDQGYIPQAISCAVRALNEIAADTALPLAAREKAAFAAANLLISDFED
Sequences:
>Translated_67_residues MKVYDCCELVRELYAQIGSGDQGYIPQAISCAVRALNEIAADTALPLAAREKAAFAAANLLISDFED >Mature_67_residues MKVYDCCELVRELYAQIGSGDQGYIPQAISCAVRALNEIAADTALPLAAREKAAFAAANLLISDFED
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0253 family
Homologues:
Organism=Escherichia coli, GI48994876, Length=59, Percent_Identity=62.7118644067797, Blast_Score=82, Evalue=9e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1598_VIBC3 (A5F359)
Other databases:
- EMBL: CP000627 - EMBL: CP001235 - STRING: A5F359 - GenomeReviews: CP000627_GR - GenomeReviews: CP001235_GR - KEGG: vco:VC0395_A0398 - eggNOG: NOG08240 - HOGENOM: HBG298416 - OMA: ISDFEDK - ProtClustDB: PRK04964 - BioCyc: VCHO345073:VC0395_A0398-MONOMER - HAMAP: MF_01064 - InterPro: IPR009624 - ProDom: PD054643
Pfam domain/function: PF06786 UPF0253
EC number: NA
Molecular weight: Translated: 7179; Mature: 7179
Theoretical pI: Translated: 4.05; Mature: 4.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 4.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVYDCCELVRELYAQIGSGDQGYIPQAISCAVRALNEIAADTALPLAAREKAAFAAANL CCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH LISDFED HHHCCCC >Mature Secondary Structure MKVYDCCELVRELYAQIGSGDQGYIPQAISCAVRALNEIAADTALPLAAREKAAFAAANL CCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH LISDFED HHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA