| Definition | Vibrio cholerae M66-2 chromosome I, complete genome. |
|---|---|
| Accession | NC_012578 |
| Length | 2,892,523 |
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The map label for this gene is 227081044
Identifier: 227081044
GI number: 227081044
Start: 889092
End: 889304
Strand: Direct
Name: 227081044
Synonym: VCM66_0825
Alternate gene names: NA
Gene position: 889092-889304 (Clockwise)
Preceding gene: 227081040
Following gene: 227081045
Centisome position: 30.74
GC content: 38.03
Gene sequence:
>213_bases GTGCAAATGGGTCGTAACTCAAAATTAACGAAAAAAATGACGCAAACGGTTGCTTTTGGTGTTACGTCACAAAAAGAATT CCTCTATAATGCGCAGCCATCAGTAGAGGTGAAATCGGCATACATTCAACAAATAGAGTTTAATGTGCTGTATTCGAAAG AGTTTATGCCAATTACACCTCAATCAATTGGACATAGAGACCTAAGCACATGA
Upstream 100 bases:
>100_bases CAATTTGGGTTTTCTCTCATCAAGACAGATGCCTTTATATCAAAGGCGCTGGTTTTGGCAAAGTCCTCACTGAGTAAGCT GTCATTTTGCTCGAAGATTT
Downstream 100 bases:
>100_bases GAATTTTGCGTGGCTCCCCAGCTCTTTCAGAGTTTCGTGTTAACAAGCTCCTGACCGCGTGTCGTGAACAGCAACTGCCT GTAACCGGTATTTACGCCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 70; Mature: 70
Protein sequence:
>70_residues MQMGRNSKLTKKMTQTVAFGVTSQKEFLYNAQPSVEVKSAYIQQIEFNVLYSKEFMPITPQSIGHRDLST
Sequences:
>Translated_70_residues MQMGRNSKLTKKMTQTVAFGVTSQKEFLYNAQPSVEVKSAYIQQIEFNVLYSKEFMPITPQSIGHRDLST >Mature_70_residues MQMGRNSKLTKKMTQTVAFGVTSQKEFLYNAQPSVEVKSAYIQQIEFNVLYSKEFMPITPQSIGHRDLST
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8003; Mature: 8003
Theoretical pI: Translated: 9.97; Mature: 9.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.7 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.7 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQMGRNSKLTKKMTQTVAFGVTSQKEFLYNAQPSVEVKSAYIQQIEFNVLYSKEFMPITP CCCCCCCHHHHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHHHEEEEECCCCCCCCC QSIGHRDLST CCCCCCCCCC >Mature Secondary Structure MQMGRNSKLTKKMTQTVAFGVTSQKEFLYNAQPSVEVKSAYIQQIEFNVLYSKEFMPITP CCCCCCCHHHHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHHHEEEEECCCCCCCCC QSIGHRDLST CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA