| Definition | Vibrio cholerae M66-2 chromosome I, complete genome. |
|---|---|
| Accession | NC_012578 |
| Length | 2,892,523 |
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The map label for this gene is 227080987
Identifier: 227080987
GI number: 227080987
Start: 820580
End: 820732
Strand: Reverse
Name: 227080987
Synonym: VCM66_0766
Alternate gene names: NA
Gene position: 820732-820580 (Counterclockwise)
Preceding gene: 227080990
Following gene: 227080986
Centisome position: 28.37
GC content: 43.14
Gene sequence:
>153_bases ATGCAATTTTTAGCTTTACTGCCCAACACCTGCTTACAATTAACCCAACGAGCCGCCATCAATGGGCTTGAGTCAAACCG CTTCATTCGTATACTGGGCGCTCAATCACTAGGAAGTTGTTTGTATGAAATCCAACCAAAGCTTACTCAGTAA
Upstream 100 bases:
>100_bases ATGGGCAGTTCCATTTCAAAGTTGTTTGGCTTTCTAGAGTAGAGATAGCTCAAGATGAATTGCACTTTGCCTATCGAATC CCGATGGTTCAAGTCACTCT
Downstream 100 bases:
>100_bases TGTTCTGATCAACATTGTTATTCCAGTGGTGATTTTGAGCAAAATGAGCGGTGAAGATAACCTTGGCCCAACGTGGGCAT TGGTGGCCGCGTTAGCCTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 50; Mature: 50
Protein sequence:
>50_residues MQFLALLPNTCLQLTQRAAINGLESNRFIRILGAQSLGSCLYEIQPKLTQ
Sequences:
>Translated_50_residues MQFLALLPNTCLQLTQRAAINGLESNRFIRILGAQSLGSCLYEIQPKLTQ >Mature_50_residues MQFLALLPNTCLQLTQRAAINGLESNRFIRILGAQSLGSCLYEIQPKLTQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5578; Mature: 5578
Theoretical pI: Translated: 8.80; Mature: 8.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 4.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQFLALLPNTCLQLTQRAAINGLESNRFIRILGAQSLGSCLYEIQPKLTQ CCHHHHCCHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHCCCCCCC >Mature Secondary Structure MQFLALLPNTCLQLTQRAAINGLESNRFIRILGAQSLGSCLYEIQPKLTQ CCHHHHCCHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA