| Definition | Vibrio cholerae M66-2 chromosome I, complete genome. |
|---|---|
| Accession | NC_012578 |
| Length | 2,892,523 |
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The map label for this gene is 227080919
Identifier: 227080919
GI number: 227080919
Start: 751417
End: 751680
Strand: Reverse
Name: 227080919
Synonym: VCM66_0698
Alternate gene names: NA
Gene position: 751680-751417 (Counterclockwise)
Preceding gene: 227080924
Following gene: 227080916
Centisome position: 25.99
GC content: 47.73
Gene sequence:
>264_bases ATGTCAGAGAAACAGTCTGACCATTTTTACCCACCTAATCGCGCAAACTTACGCTCTCAGCAGGTCGATAATTCAAGCCT TATTGCCATCAACAAGGCTCTTTGCGGAGCGGTCGCGTTTCCCTGCGAAAAAGGTCTGCACCTTTTCTGGCTACTGCCAG CACTCGTTTTCGTTATCCCTTGCCACCTGAAGCAACCACTCCAAGTGATTAGGGATGATTACGCTTTAGTCATCTGCTTA CGAATAAACATCGCATCGCCGTAA
Upstream 100 bases:
>100_bases CGCAGGGGTTTGCACTGTACCGCGTTCAAAAATCAATTGACCACGACGGGCATTACCGTTTTTCTTTTTCAGTTCAAATT TTAATTTCACGAAGCCTCCA
Downstream 100 bases:
>100_bases CTAAAGAAGCGATATTGCTCTTTGACCGCATGTTCATAAGCGGCCATGGTGTGCTCATAACCTGCAAACGCACTCACCAG CATGATCAAGGTCGATTCAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 87; Mature: 86
Protein sequence:
>87_residues MSEKQSDHFYPPNRANLRSQQVDNSSLIAINKALCGAVAFPCEKGLHLFWLLPALVFVIPCHLKQPLQVIRDDYALVICL RINIASP
Sequences:
>Translated_87_residues MSEKQSDHFYPPNRANLRSQQVDNSSLIAINKALCGAVAFPCEKGLHLFWLLPALVFVIPCHLKQPLQVIRDDYALVICL RINIASP >Mature_86_residues SEKQSDHFYPPNRANLRSQQVDNSSLIAINKALCGAVAFPCEKGLHLFWLLPALVFVIPCHLKQPLQVIRDDYALVICLR INIASP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9772; Mature: 9640
Theoretical pI: Translated: 8.34; Mature: 8.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.6 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 4.7 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEKQSDHFYPPNRANLRSQQVDNSSLIAINKALCGAVAFPCEKGLHLFWLLPALVFVIP CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH CHLKQPLQVIRDDYALVICLRINIASP HCCHHHHHHHHCCCEEEEEEEEEECCC >Mature Secondary Structure SEKQSDHFYPPNRANLRSQQVDNSSLIAINKALCGAVAFPCEKGLHLFWLLPALVFVIP CCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH CHLKQPLQVIRDDYALVICLRINIASP HCCHHHHHHHHCCCEEEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA