| Definition | Vibrio cholerae M66-2 chromosome I, complete genome. |
|---|---|
| Accession | NC_012578 |
| Length | 2,892,523 |
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The map label for this gene is ppk
Identifier: 227080902
GI number: 227080902
Start: 734254
End: 736359
Strand: Reverse
Name: ppk
Synonym: VCM66_0681
Alternate gene names: 227080902
Gene position: 736359-734254 (Counterclockwise)
Preceding gene: 227080907
Following gene: 227080901
Centisome position: 25.46
GC content: 46.87
Gene sequence:
>2106_bases ATGAGTGCGGATAAGCTGTACATCGACAAGGAACTCAGTTGGCTCTCATTTAACGAGCGCGTATTACAAGAAGCGGCAGA TAAAACCGTCCCGCTGATTGAGCGGATTCGTTTTCTGGGGATATTTTCCAATAACCTCGATGAGTTTTATAAGGTGAGAT TTGCTGACGTAAAACGACAAATCTTGATCAATCGAGAACGGGGGGGCAATGATATCTCCAAACACCTCCTCTCACGCATG CAAAGCAAAGCCCTCAAACTCAACCAAGACTTCGATAACCTCTACAACGAATTGATTTTAGAAATGGCCAGACGGCGCAT TTTCTTAGTCAACGAAACGCAACTCGATGAAATCCAACTCAAGTGGGTGAAAAAGTATTTCCACAAAGAAGTGCTGCCGC ATGTCACCCCTATCATGCTGCGTGATGACATTGATGTCATGCAGTTTTTAAAAGACGAATACGCTTACATTGCGGTCGAA ATGCGCAGTGGCGATGAATTTAAATACGCGCTGATCGAGATTCCAACCGACCAACTGCCACGCTTTGTGATGCTGCCTGA GCAAAAAGGCAAACGGCGCAAAACCATTATTCTGCTCGATAACATTATTCGTCTCTGTCTGGATGAGATTTTCCGCGGTT TTTACGACTACGATACACTCAACGGTTACGCGATGAAAATGACCCGCGATGCCGAGTATGATTTGCGCCACGAAGTCGAA TACAGCTTGCTTGAGCAGATGTCAGAAGGCTTAAGCCAGCGCTTAACCGCCCTTCCTGTGCGCTTTGTGTATGAGCGTGA AATGCCTGAAGCCATGCTCAAATTCTTATGCTATAAGCTGAAAATTTCCCACTATGACAGCTTGATCCCCGGTGGACGTT ACCACAATTTTAAAGACTTTATTTCTTTCCCCAATGTCGGCCGAGATTATTTAGAAAACAAACCCTTGCCTCCGATGACT TGTGCTGACTTTGAAGGCTATGCCAATGCTTTTGATGCGATTCGCGCGCAAGATATTTTACTGCACTACCCTTATCACAG CTTTGAGCACATGACGGAGCTTGTGCGCCAAGCCTCTTTTGATCCGAAAGTCGTCAGTATCAAAATCAACATTTACCGCG TAGCCAAAGACTCCAAATTGATGAACTCGCTGGTCGATGCGGTGCACAACGGCAAACGTGTGGTGGTGGTGGTTGAGCTG CAAGCTCGTTTTGATGAAGAGGCCAATATCGAGTGGTCACGCATTCTGACCGATGCGGGCGTACACGTTATTTTCGGTGT GCCGGGAATGAAGATTCACGCCAAGCTCCTGCTTATTACCCGTAAAGAAGGGGATGAATTCGTTCGTTACGCGCACATTG GTACCGGCAACTTCCACGAACGTACGGCGCGCATTTACACCGACTTTGCCTTGCTCACCGCCAACCAAGAGCTCGCCGCC GAAGTCCGTGCCGTATTTGGTTACATCGAAAATCCATTCCGCCCCGTCAAGTTTAACCACCTGATCGTATCGCCGCGTAA CTCACGTACCCAAATTTATCGTTTACTGGATAGTGAAATCGCCAACGCCAAGGCGGGCAAAAAAGCCGCCATCACCCTTA AAGTGAACAATCTCGTTGATAAGGGATTGATCAATAAGCTGTATGGTGCAAGTGCCGCTGGAGTCAAAATCCGCATGATC ATCCGCGGTATGTGCTCTTTAGTCCCCGGAGTGGAAGGTGTCAGTGACAATATTGAGATCATCAGTATTATTGACCGCTT CCTCGAACACCCTCGCGTGTTAGTGGTACATAATGATGGCAATCCACAGGTCTTTATCTCATCGGCAGACTGGATGGAGC GCAATATAGATCACCGAATTGAGGTCATGGCTCCAATTCGTGACGAACGACTCAAACAGCGTATCATTGATATCCTTAAT ATTCAGTTCATTGATACGGTCAAAGCGCGTCGCATCGACAAAGAGATGAGCAATCAGTACGTAGAGCGCGGTAATCGCAG AAAAGTACGCTCTCAGATTGCCATTTACGACTATCTTAAGAATGTCGAGAAGCAGACTCGTAAAGCAAAAGGGCAACAAG AAACGAATGACAACAGTAGTCAGTAA
Upstream 100 bases:
>100_bases TATGACACTAAAGGCACTGCAATAAAAGTGTCACAAAAATCACTTAGTTTGCAGCTCTTTAATGATGAAAACGTCAACTC AAAACGGCATAAGGTAAAGT
Downstream 100 bases:
>100_bases CGCAAGAGAAATCGCTGCCATTGATCTGGGTTCGAACAGTTTTCATATGGTGGTCGCCAAGGTGGTCGATCAAGATCTCC AATTGATTAGCCGCCATAAG
Product: polyphosphate kinase
Products: NA
Alternate protein names: ATP-polyphosphate phosphotransferase; Polyphosphoric acid kinase
Number of amino acids: Translated: 701; Mature: 700
Protein sequence:
>701_residues MSADKLYIDKELSWLSFNERVLQEAADKTVPLIERIRFLGIFSNNLDEFYKVRFADVKRQILINRERGGNDISKHLLSRM QSKALKLNQDFDNLYNELILEMARRRIFLVNETQLDEIQLKWVKKYFHKEVLPHVTPIMLRDDIDVMQFLKDEYAYIAVE MRSGDEFKYALIEIPTDQLPRFVMLPEQKGKRRKTIILLDNIIRLCLDEIFRGFYDYDTLNGYAMKMTRDAEYDLRHEVE YSLLEQMSEGLSQRLTALPVRFVYEREMPEAMLKFLCYKLKISHYDSLIPGGRYHNFKDFISFPNVGRDYLENKPLPPMT CADFEGYANAFDAIRAQDILLHYPYHSFEHMTELVRQASFDPKVVSIKINIYRVAKDSKLMNSLVDAVHNGKRVVVVVEL QARFDEEANIEWSRILTDAGVHVIFGVPGMKIHAKLLLITRKEGDEFVRYAHIGTGNFHERTARIYTDFALLTANQELAA EVRAVFGYIENPFRPVKFNHLIVSPRNSRTQIYRLLDSEIANAKAGKKAAITLKVNNLVDKGLINKLYGASAAGVKIRMI IRGMCSLVPGVEGVSDNIEIISIIDRFLEHPRVLVVHNDGNPQVFISSADWMERNIDHRIEVMAPIRDERLKQRIIDILN IQFIDTVKARRIDKEMSNQYVERGNRRKVRSQIAIYDYLKNVEKQTRKAKGQQETNDNSSQ
Sequences:
>Translated_701_residues MSADKLYIDKELSWLSFNERVLQEAADKTVPLIERIRFLGIFSNNLDEFYKVRFADVKRQILINRERGGNDISKHLLSRM QSKALKLNQDFDNLYNELILEMARRRIFLVNETQLDEIQLKWVKKYFHKEVLPHVTPIMLRDDIDVMQFLKDEYAYIAVE MRSGDEFKYALIEIPTDQLPRFVMLPEQKGKRRKTIILLDNIIRLCLDEIFRGFYDYDTLNGYAMKMTRDAEYDLRHEVE YSLLEQMSEGLSQRLTALPVRFVYEREMPEAMLKFLCYKLKISHYDSLIPGGRYHNFKDFISFPNVGRDYLENKPLPPMT CADFEGYANAFDAIRAQDILLHYPYHSFEHMTELVRQASFDPKVVSIKINIYRVAKDSKLMNSLVDAVHNGKRVVVVVEL QARFDEEANIEWSRILTDAGVHVIFGVPGMKIHAKLLLITRKEGDEFVRYAHIGTGNFHERTARIYTDFALLTANQELAA EVRAVFGYIENPFRPVKFNHLIVSPRNSRTQIYRLLDSEIANAKAGKKAAITLKVNNLVDKGLINKLYGASAAGVKIRMI IRGMCSLVPGVEGVSDNIEIISIIDRFLEHPRVLVVHNDGNPQVFISSADWMERNIDHRIEVMAPIRDERLKQRIIDILN IQFIDTVKARRIDKEMSNQYVERGNRRKVRSQIAIYDYLKNVEKQTRKAKGQQETNDNSSQ >Mature_700_residues SADKLYIDKELSWLSFNERVLQEAADKTVPLIERIRFLGIFSNNLDEFYKVRFADVKRQILINRERGGNDISKHLLSRMQ SKALKLNQDFDNLYNELILEMARRRIFLVNETQLDEIQLKWVKKYFHKEVLPHVTPIMLRDDIDVMQFLKDEYAYIAVEM RSGDEFKYALIEIPTDQLPRFVMLPEQKGKRRKTIILLDNIIRLCLDEIFRGFYDYDTLNGYAMKMTRDAEYDLRHEVEY SLLEQMSEGLSQRLTALPVRFVYEREMPEAMLKFLCYKLKISHYDSLIPGGRYHNFKDFISFPNVGRDYLENKPLPPMTC ADFEGYANAFDAIRAQDILLHYPYHSFEHMTELVRQASFDPKVVSIKINIYRVAKDSKLMNSLVDAVHNGKRVVVVVELQ ARFDEEANIEWSRILTDAGVHVIFGVPGMKIHAKLLLITRKEGDEFVRYAHIGTGNFHERTARIYTDFALLTANQELAAE VRAVFGYIENPFRPVKFNHLIVSPRNSRTQIYRLLDSEIANAKAGKKAAITLKVNNLVDKGLINKLYGASAAGVKIRMII RGMCSLVPGVEGVSDNIEIISIIDRFLEHPRVLVVHNDGNPQVFISSADWMERNIDHRIEVMAPIRDERLKQRIIDILNI QFIDTVKARRIDKEMSNQYVERGNRRKVRSQIAIYDYLKNVEKQTRKAKGQQETNDNSSQ
Specific function: Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
COG id: COG0855
COG function: function code P; Polyphosphate kinase
Gene ontology:
Cell location: Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 PLD phosphodiesterase domains
Homologues:
Organism=Escherichia coli, GI1788847, Length=686, Percent_Identity=64.1399416909621, Blast_Score=947, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PPK_VIBCH (Q9KU07)
Other databases:
- EMBL: AF083928 - EMBL: AE003852 - PIR: D82289 - RefSeq: NP_230372.1 - ProteinModelPortal: Q9KU07 - SMR: Q9KU07 - GeneID: 2615732 - GenomeReviews: AE003852_GR - KEGG: vch:VC0723 - TIGR: VC_0723 - HOGENOM: HBG341268 - OMA: FLISRRE - ProtClustDB: PRK05443 - BRENDA: 2.7.4.1 - HAMAP: MF_00347 - InterPro: IPR001736 - InterPro: IPR003414 - PIRSF: PIRSF015589 - TIGRFAMs: TIGR03705
Pfam domain/function: PF02503 PP_kinase
EC number: =2.7.4.1
Molecular weight: Translated: 81646; Mature: 81515
Theoretical pI: Translated: 8.93; Mature: 8.93
Prosite motif: PS50035 PLD
Important sites: ACT_SITE 433-433 ACT_SITE 452-452
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSADKLYIDKELSWLSFNERVLQEAADKTVPLIERIRFLGIFSNNLDEFYKVRFADVKRQ CCCCCEEEECCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH ILINRERGGNDISKHLLSRMQSKALKLNQDFDNLYNELILEMARRRIFLVNETQLDEIQL HEEECCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCEEEEEECCCHHHHHH KWVKKYFHKEVLPHVTPIMLRDDIDVMQFLKDEYAYIAVEMRSGDEFKYALIEIPTDQLP HHHHHHHHHHHHHCCCCEEEECCHHHHHHHHCCCEEEEEEECCCCCEEEEEEECCHHHCC RFVMLPEQKGKRRKTIILLDNIIRLCLDEIFRGFYDYDTLNGYAMKMTRDAEYDLRHEVE CEEECCCCCCCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHH YSLLEQMSEGLSQRLTALPVRFVYEREMPEAMLKFLCYKLKISHYDSLIPGGRYHNFKDF HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH ISFPNVGRDYLENKPLPPMTCADFEGYANAFDAIRAQDILLHYPYHSFEHMTELVRQASF HCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHCCC DPKVVSIKINIYRVAKDSKLMNSLVDAVHNGKRVVVVVELQARFDEEANIEWSRILTDAG CCEEEEEEEEEEEECCHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCHHHHHHHCC VHVIFGVPGMKIHAKLLLITRKEGDEFVRYAHIGTGNFHERTARIYTDFALLTANQELAA CEEEECCCCCEEEEEEEEEEECCCCCEEEEEEECCCCHHHHHHHHHEEEEEEECCHHHHH EVRAVFGYIENPFRPVKFNHLIVSPRNSRTQIYRLLDSEIANAKAGKKAAITLKVNNLVD HHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEEHHHHH KGLINKLYGASAAGVKIRMIIRGMCSLVPGVEGVSDNIEIISIIDRFLEHPRVLVVHNDG HHHHHHHHCCCCCCEEHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCEEEEEEECC NPQVFISSADWMERNIDHRIEVMAPIRDERLKQRIIDILNIQFIDTVKARRIDKEMSNQY CCEEEEECCHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VERGNRRKVRSQIAIYDYLKNVEKQTRKAKGQQETNDNSSQ HHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure SADKLYIDKELSWLSFNERVLQEAADKTVPLIERIRFLGIFSNNLDEFYKVRFADVKRQ CCCCEEEECCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH ILINRERGGNDISKHLLSRMQSKALKLNQDFDNLYNELILEMARRRIFLVNETQLDEIQL HEEECCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCEEEEEECCCHHHHHH KWVKKYFHKEVLPHVTPIMLRDDIDVMQFLKDEYAYIAVEMRSGDEFKYALIEIPTDQLP HHHHHHHHHHHHHCCCCEEEECCHHHHHHHHCCCEEEEEEECCCCCEEEEEEECCHHHCC RFVMLPEQKGKRRKTIILLDNIIRLCLDEIFRGFYDYDTLNGYAMKMTRDAEYDLRHEVE CEEECCCCCCCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHH YSLLEQMSEGLSQRLTALPVRFVYEREMPEAMLKFLCYKLKISHYDSLIPGGRYHNFKDF HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH ISFPNVGRDYLENKPLPPMTCADFEGYANAFDAIRAQDILLHYPYHSFEHMTELVRQASF HCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHCCC DPKVVSIKINIYRVAKDSKLMNSLVDAVHNGKRVVVVVELQARFDEEANIEWSRILTDAG CCEEEEEEEEEEEECCHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCHHHHHHHCC VHVIFGVPGMKIHAKLLLITRKEGDEFVRYAHIGTGNFHERTARIYTDFALLTANQELAA CEEEECCCCCEEEEEEEEEEECCCCCEEEEEEECCCCHHHHHHHHHEEEEEEECCHHHHH EVRAVFGYIENPFRPVKFNHLIVSPRNSRTQIYRLLDSEIANAKAGKKAAITLKVNNLVD HHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEEHHHHH KGLINKLYGASAAGVKIRMIIRGMCSLVPGVEGVSDNIEIISIIDRFLEHPRVLVVHNDG HHHHHHHHCCCCCCEEHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCEEEEEEECC NPQVFISSADWMERNIDHRIEVMAPIRDERLKQRIIDILNIQFIDTVKARRIDKEMSNQY CCEEEEECCHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VERGNRRKVRSQIAIYDYLKNVEKQTRKAKGQQETNDNSSQ HHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10952301