Definition Vibrio cholerae M66-2 chromosome I, complete genome.
Accession NC_012578
Length 2,892,523

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The map label for this gene is 227080847

Identifier: 227080847

GI number: 227080847

Start: 671692

End: 672006

Strand: Direct

Name: 227080847

Synonym: VCM66_0624

Alternate gene names: NA

Gene position: 671692-672006 (Clockwise)

Preceding gene: 227080846

Following gene: 227080851

Centisome position: 23.22

GC content: 47.94

Gene sequence:

>315_bases
GTGTCTTCTGACTTTTCCCTTTCGATCGTCATTTTCCCCAGCAAAACCACTGGAGAAAATACCATGCGTCAATCTATTTA
CTTACAATTAGCTGTGTTACTGGTTCGTGCTGAGCTGCGTCGTGAGGAGCGAGTGTGGAAGCGTAAAGTGCGCAGAAGTA
GTTACCATCTACCTTGGAATAATCCGCATTTGTTGCGTGATATTGGCTTGGAAACGGATGGTCGTCCAATCGGCTTGAGT
TTACCGGATGCTGTTGTCGCGGAACGCCGTGTGAGACATATTCGTCGAGTGTTAGCTGCGCGAATACCGACGTAA

Upstream 100 bases:

>100_bases
GAGATTTTCCCGTGTGCGCAATGGGCAATGATTTGAGCAAAGATCACTGAATTAATCCGTAACCTCTTATTAGGCTGCGG
AAAATGGCAGCTGAGTAGGA

Downstream 100 bases:

>100_bases
TGCTAAGGGGCTGGTCTGTGCACCAGCCCCCACATCACTAAGGACAGGGATTGGAATAAGTGGTTCCAATCTCCTGAATT
TTTTGCAGAAGTTCTGCATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 104; Mature: 103

Protein sequence:

>104_residues
MSSDFSLSIVIFPSKTTGENTMRQSIYLQLAVLLVRAELRREERVWKRKVRRSSYHLPWNNPHLLRDIGLETDGRPIGLS
LPDAVVAERRVRHIRRVLAARIPT

Sequences:

>Translated_104_residues
MSSDFSLSIVIFPSKTTGENTMRQSIYLQLAVLLVRAELRREERVWKRKVRRSSYHLPWNNPHLLRDIGLETDGRPIGLS
LPDAVVAERRVRHIRRVLAARIPT
>Mature_103_residues
SSDFSLSIVIFPSKTTGENTMRQSIYLQLAVLLVRAELRREERVWKRKVRRSSYHLPWNNPHLLRDIGLETDGRPIGLSL
PDAVVAERRVRHIRRVLAARIPT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12084; Mature: 11953

Theoretical pI: Translated: 11.91; Mature: 11.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSDFSLSIVIFPSKTTGENTMRQSIYLQLAVLLVRAELRREERVWKRKVRRSSYHLPWN
CCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
NPHLLRDIGLETDGRPIGLSLPDAVVAERRVRHIRRVLAARIPT
CCCHHHCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SSDFSLSIVIFPSKTTGENTMRQSIYLQLAVLLVRAELRREERVWKRKVRRSSYHLPWN
CCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
NPHLLRDIGLETDGRPIGLSLPDAVVAERRVRHIRRVLAARIPT
CCCHHHCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA