| Definition | Vibrio cholerae M66-2 chromosome I, complete genome. |
|---|---|
| Accession | NC_012578 |
| Length | 2,892,523 |
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The map label for this gene is 227080771
Identifier: 227080771
GI number: 227080771
Start: 574097
End: 574198
Strand: Direct
Name: 227080771
Synonym: VCM66_0546
Alternate gene names: NA
Gene position: 574097-574198 (Clockwise)
Preceding gene: 227080770
Following gene: 227080772
Centisome position: 19.85
GC content: 46.08
Gene sequence:
>102_bases TTGCCCTTAGCCAATATCCCCTTCCTACTTGAAGTTGCAGCGGTATTGGCTACGTTTGCTCACCCCAATCACACAGTTTA TCTATGCTCATGGGGATTATGA
Upstream 100 bases:
>100_bases TTGATGGTGATGGCCGAAATGCCGCAGTCATGCGGCATTTTTGTCTCTGATCTTTGAATGCAGGGCAAGCCTATAATATT AGCTATTTCTGTATTAATCA
Downstream 100 bases:
>100_bases GAGCCATCCTTGGCTCTCACCAAAGGCCAGCCGATGGCTGTGCAAATTTGTTCCAGACAAATTTGTCACTTACTTGCCGC CTAGCTGCAATTCCAAGTAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 33; Mature: 32
Protein sequence:
>33_residues MPLANIPFLLEVAAVLATFAHPNHTVYLCSWGL
Sequences:
>Translated_33_residues MPLANIPFLLEVAAVLATFAHPNHTVYLCSWGL >Mature_32_residues PLANIPFLLEVAAVLATFAHPNHTVYLCSWGL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 3610; Mature: 3479
Theoretical pI: Translated: 6.49; Mature: 6.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLANIPFLLEVAAVLATFAHPNHTVYLCSWGL CCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCC >Mature Secondary Structure PLANIPFLLEVAAVLATFAHPNHTVYLCSWGL CCCCCCHHHHHHHHHHHHCCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA