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The map label for this gene is oadB-1 [H]

Identifier: 227080734

GI number: 227080734

Start: 541896

End: 543026

Strand: Direct

Name: oadB-1 [H]

Synonym: VCM66_0509

Alternate gene names: 227080734

Gene position: 541896-543026 (Clockwise)

Preceding gene: 227080733

Following gene: 227080735

Centisome position: 18.73

GC content: 51.19

Gene sequence:

>1131_bases
ATGGACGGATTAATTACCCTATGGCAAGAGACGGGGATTGCCAATTTTGAGCTAGGGCAGATCATCATGATCTTGGTCGG
CTGTACGCTACTGTTTCTGGCCATTCGTAAAGGCTTTGAGCCGTTATTGCTGCTGCCGATTGGTTTTGGTGCAGTGTTAG
CCAATATTCCTAATGCAGGATTTACCGAGCCCGGTGGCTTGCTGTACTACGTTTACCATATCGGTATTGAGTCAGGCGTT
TTCCCATTGCTGATCTTTATGGGCGTGGGAGCGATGACGGACTTCGGTGCACTGATTGCCAACCCGAAAACCTTGTGGTT
AGGCGCTGCGGCTCAGTTAGGCATTTTTGCTACCTTGTTTGGTGCCATTTTGCTCAACTTTGTACCGGGCATGGAATTCT
CTATGGCTGATGCCTCGTCGATTGCAATCATTGGTGGAGCGGATGGTCCAACGGCCATTTTCCTTGCCAGCCAGTTATCG
CCGGATTTGCTCGGGGCAATTGCGGTCGCTGCGTATAGCTATATGGCGCTGGTTCCGATTATTCAACCACCGATCATGAA
GGCCTTGACGACGCCGGAAGAGCGTAAAATCAAGATGGCTCAGCTACGCCACGTGGGTAAAACCGAGAAAATCGTGTTTC
CACTCGTGGTGCTGCTAATGACCATTCTGTTTTTGCCTGCGGCAACACCCTTGGTCGGCATGTTCTGCTTGGGGAATCTG
ATGCGTGAAGCGGGTGTGGTGGATCGTTTGTCCAAAACCGCGCAAAACGAGCTGATCAATATCGTCACCATTTTCTTAGG
CTTGGGGGTCGGCTCTAAATTGCAAGCCGAGACTTTCCTCAATTTGGAAACCTTAGGTATTTTGGCACTCGGCGCGGCTG
CTTTCAGTATTGGCACGGCGGGTGGGGTGATTATGGCGAAGATCCTCAATAAATTTTCCAAAGAGGATATCAACCCACTG
ATCGGTGCTGCGGGTGTTTCTGCGGTACCTATGGCCGCTCGAGTCGTCAATAAAGTGGGCCTAGAGGCCAACCCGCAAAA
CTTCTTATTGATGCATGCCATGGGGCCAAATGTGGCTGGTGTTTTGGGCTCAGCGGTAGCGGCAGGTGTGTTGCTGGCTC
TAGTGGGTTAA

Upstream 100 bases:

>100_bases
CCGTGCAGCGCGCAGTGGTGTGATTCAGGAACTGCATGTCAAAGAAGGCGACAGCGTTCGCGTTGGCGCCTCACTGCTGA
GCTTGGCATAAGGGAAAATC

Downstream 100 bases:

>100_bases
GCATGAGTTGGTTGCACTTTGCGCAAAATGGCGATGCAAAGTTAACGACTTAAAAGAAATTGGTATATATTCAAAGGGAT
GCTTCGGCATCCCTTTTTAT

Product: oxaloacetate decarboxylase, beta subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 376; Mature: 376

Protein sequence:

>376_residues
MDGLITLWQETGIANFELGQIIMILVGCTLLFLAIRKGFEPLLLLPIGFGAVLANIPNAGFTEPGGLLYYVYHIGIESGV
FPLLIFMGVGAMTDFGALIANPKTLWLGAAAQLGIFATLFGAILLNFVPGMEFSMADASSIAIIGGADGPTAIFLASQLS
PDLLGAIAVAAYSYMALVPIIQPPIMKALTTPEERKIKMAQLRHVGKTEKIVFPLVVLLMTILFLPAATPLVGMFCLGNL
MREAGVVDRLSKTAQNELINIVTIFLGLGVGSKLQAETFLNLETLGILALGAAAFSIGTAGGVIMAKILNKFSKEDINPL
IGAAGVSAVPMAARVVNKVGLEANPQNFLLMHAMGPNVAGVLGSAVAAGVLLALVG

Sequences:

>Translated_376_residues
MDGLITLWQETGIANFELGQIIMILVGCTLLFLAIRKGFEPLLLLPIGFGAVLANIPNAGFTEPGGLLYYVYHIGIESGV
FPLLIFMGVGAMTDFGALIANPKTLWLGAAAQLGIFATLFGAILLNFVPGMEFSMADASSIAIIGGADGPTAIFLASQLS
PDLLGAIAVAAYSYMALVPIIQPPIMKALTTPEERKIKMAQLRHVGKTEKIVFPLVVLLMTILFLPAATPLVGMFCLGNL
MREAGVVDRLSKTAQNELINIVTIFLGLGVGSKLQAETFLNLETLGILALGAAAFSIGTAGGVIMAKILNKFSKEDINPL
IGAAGVSAVPMAARVVNKVGLEANPQNFLLMHAMGPNVAGVLGSAVAAGVLLALVG
>Mature_376_residues
MDGLITLWQETGIANFELGQIIMILVGCTLLFLAIRKGFEPLLLLPIGFGAVLANIPNAGFTEPGGLLYYVYHIGIESGV
FPLLIFMGVGAMTDFGALIANPKTLWLGAAAQLGIFATLFGAILLNFVPGMEFSMADASSIAIIGGADGPTAIFLASQLS
PDLLGAIAVAAYSYMALVPIIQPPIMKALTTPEERKIKMAQLRHVGKTEKIVFPLVVLLMTILFLPAATPLVGMFCLGNL
MREAGVVDRLSKTAQNELINIVTIFLGLGVGSKLQAETFLNLETLGILALGAAAFSIGTAGGVIMAKILNKFSKEDINPL
IGAAGVSAVPMAARVVNKVGLEANPQNFLLMHAMGPNVAGVLGSAVAAGVLLALVG

Specific function: Lyase and sodium transporter [H]

COG id: COG1883

COG function: function code C; Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gcdB/mmdB/oadB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005661 [H]

Pfam domain/function: PF03977 OAD_beta [H]

EC number: =4.1.1.3 [H]

Molecular weight: Translated: 39129; Mature: 39129

Theoretical pI: Translated: 5.74; Mature: 5.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDGLITLWQETGIANFELGQIIMILVGCTLLFLAIRKGFEPLLLLPIGFGAVLANIPNAG
CCCCEEHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHCCCCCC
FTEPGGLLYYVYHIGIESGVFPLLIFMGVGAMTDFGALIANPKTLWLGAAAQLGIFATLF
CCCCCCEEEEEEEECCCCCHHHHHHHHHCCHHHHHHHHHCCCCCEEEEHHHHHHHHHHHH
GAILLNFVPGMEFSMADASSIAIIGGADGPTAIFLASQLSPDLLGAIAVAAYSYMALVPI
HHHHHHHCCCCCEECCCCCCEEEEECCCCCEEEEEEHHCCHHHHHHHHHHHHHHHHHHHH
IQPPIMKALTTPEERKIKMAQLRHVGKTEKIVFPLVVLLMTILFLPAATPLVGMFCLGNL
HCCHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
MREAGVVDRLSKTAQNELINIVTIFLGLGVGSKLQAETFLNLETLGILALGAAAFSIGTA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
GGVIMAKILNKFSKEDINPLIGAAGVSAVPMAARVVNKVGLEANPQNFLLMHAMGPNVAG
CHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHH
VLGSAVAAGVLLALVG
HHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDGLITLWQETGIANFELGQIIMILVGCTLLFLAIRKGFEPLLLLPIGFGAVLANIPNAG
CCCCEEHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHCCCCCC
FTEPGGLLYYVYHIGIESGVFPLLIFMGVGAMTDFGALIANPKTLWLGAAAQLGIFATLF
CCCCCCEEEEEEEECCCCCHHHHHHHHHCCHHHHHHHHHCCCCCEEEEHHHHHHHHHHHH
GAILLNFVPGMEFSMADASSIAIIGGADGPTAIFLASQLSPDLLGAIAVAAYSYMALVPI
HHHHHHHCCCCCEECCCCCCEEEEECCCCCEEEEEEHHCCHHHHHHHHHHHHHHHHHHHH
IQPPIMKALTTPEERKIKMAQLRHVGKTEKIVFPLVVLLMTILFLPAATPLVGMFCLGNL
HCCHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
MREAGVVDRLSKTAQNELINIVTIFLGLGVGSKLQAETFLNLETLGILALGAAAFSIGTA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
GGVIMAKILNKFSKEDINPLIGAAGVSAVPMAARVVNKVGLEANPQNFLLMHAMGPNVAG
CHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHH
VLGSAVAAGVLLALVG
HHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]