| Definition | Vibrio cholerae M66-2 chromosome I, complete genome. |
|---|---|
| Accession | NC_012578 |
| Length | 2,892,523 |
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The map label for this gene is cysP [H]
Identifier: 227080721
GI number: 227080721
Start: 527406
End: 528407
Strand: Direct
Name: cysP [H]
Synonym: VCM66_0496
Alternate gene names: 227080721
Gene position: 527406-528407 (Clockwise)
Preceding gene: 227080719
Following gene: 227080722
Centisome position: 18.23
GC content: 49.4
Gene sequence:
>1002_bases ATGAACCGAATTAAATCGACATTAACGGCGTTACTGCTAGCAGGCTCGTTCCAAGCCTCTGCGGCCGATCAAACCATTCT CAACTCATCTTATGATATTGCTCGTGAGCTGTTTGTGGCTTACAACCCTGTGTTTGCTGAGCATTGGCAACAAAAAACAG GGAAGACGGTCGAAATTAAACAGTCGCACGCTGGATCATCGGCTCAAGCGCGTTCTATTCTGCAAGGCCTAGCGGCAGAT GTGGTGACGTTTAACCAAGTGACTGATGTGCAAATTCTGCACGACAAAGGCAAGCTGATCCCAGCAAACTGGCAAACCCT GCTACCAAACGCGAGCTCGCCTTATTACTCCACCACCGCATTTTTGGTGCGCAAAGGCAACCCAAAGAACATCCAAGATT GGAGTGATTTGGTACGTGATGATGTGAAAAGTGTGTTCCCGAACCCGAAAACCTCAGGTAATGCGCGTTACACCTACTTG GCAGCGCTAGGCTTTGCACAAAAACAATTTGGTCAGGATAACCAAGTGCAGCAAGATGAGTTTTTGAAGAAGTTTCTGGC TAACGTCGCGGTATTTGATACTGGCGGCCGTGGTGCAACCACATCATTCGTTGAGCGTGGGATTGGCGATGTGCTGATCA CCTTTGAATCGGAAGTGAATAACATTCGTCAGCAATACGGTGCGGATGATTACCAAGTGGTGGTGCCGAAAACCTCGATT TTGGCTGAATTCCCAGTCGCGGTAGTGGAGAAAGTGGCAAAACGTAATGGGACTTATGATGTGGCGACCGAATACGTTTC ATACCTGTACAGTGAGCCAGCACAGCGTTTGCTTGCAGAATTTAACTACCGTGTGCACGATGCCAAGGTACAAGCTGAGT TTGCTGAGCGTTTTCCCGCCGTTGAATTGCTGACTGTGGAAGGGATCGCCGGTGGCTGGGAGCAAGCGATGCAAACCCAG TTCGCCAATGGGGCTAAATTGGATCAACTGCTGCGCCGCTAA
Upstream 100 bases:
>100_bases AAAACGTTCTATTAATGTTCTTTTTTATAAACGATTTTCCTCATAATCTAGCAGCATAAAGGAAGCCATCTTGGCACTTG TGATTCTGGAGTAGAACAAC
Downstream 100 bases:
>100_bases TCTTGTCTGACATTTCTCTAGGTTGCCCAATGGATGGGCAACCTTAATTCCACCCTGATGTATCGAAAGAGGTTTTATGG GTCAAACGCTTGCACACTCT
Product: thiosulfate ABC transporter, periplasmic thiosulfate-binding protein
Products: SO42- [Cytoplasm]; phosphate; ADP; S2O32- [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 333; Mature: 333
Protein sequence:
>333_residues MNRIKSTLTALLLAGSFQASAADQTILNSSYDIARELFVAYNPVFAEHWQQKTGKTVEIKQSHAGSSAQARSILQGLAAD VVTFNQVTDVQILHDKGKLIPANWQTLLPNASSPYYSTTAFLVRKGNPKNIQDWSDLVRDDVKSVFPNPKTSGNARYTYL AALGFAQKQFGQDNQVQQDEFLKKFLANVAVFDTGGRGATTSFVERGIGDVLITFESEVNNIRQQYGADDYQVVVPKTSI LAEFPVAVVEKVAKRNGTYDVATEYVSYLYSEPAQRLLAEFNYRVHDAKVQAEFAERFPAVELLTVEGIAGGWEQAMQTQ FANGAKLDQLLRR
Sequences:
>Translated_333_residues MNRIKSTLTALLLAGSFQASAADQTILNSSYDIARELFVAYNPVFAEHWQQKTGKTVEIKQSHAGSSAQARSILQGLAAD VVTFNQVTDVQILHDKGKLIPANWQTLLPNASSPYYSTTAFLVRKGNPKNIQDWSDLVRDDVKSVFPNPKTSGNARYTYL AALGFAQKQFGQDNQVQQDEFLKKFLANVAVFDTGGRGATTSFVERGIGDVLITFESEVNNIRQQYGADDYQVVVPKTSI LAEFPVAVVEKVAKRNGTYDVATEYVSYLYSEPAQRLLAEFNYRVHDAKVQAEFAERFPAVELLTVEGIAGGWEQAMQTQ FANGAKLDQLLRR >Mature_333_residues MNRIKSTLTALLLAGSFQASAADQTILNSSYDIARELFVAYNPVFAEHWQQKTGKTVEIKQSHAGSSAQARSILQGLAAD VVTFNQVTDVQILHDKGKLIPANWQTLLPNASSPYYSTTAFLVRKGNPKNIQDWSDLVRDDVKSVFPNPKTSGNARYTYL AALGFAQKQFGQDNQVQQDEFLKKFLANVAVFDTGGRGATTSFVERGIGDVLITFESEVNNIRQQYGADDYQVVVPKTSI LAEFPVAVVEKVAKRNGTYDVATEYVSYLYSEPAQRLLAEFNYRVHDAKVQAEFAERFPAVELLTVEGIAGGWEQAMQTQ FANGAKLDQLLRR
Specific function: Part of the ABC transporter complex CysAWTP (TC 3.A.1.6.1) involved in sulfate/thiosulfate import. This protein specifically binds thiosulfate and is involved in its transmembrane transport [H]
COG id: COG4150
COG function: function code P; ABC-type sulfate transport system, periplasmic component
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the prokaryotic sulfate-binding protein family [H]
Homologues:
Organism=Escherichia coli, GI1788765, Length=307, Percent_Identity=61.8892508143323, Blast_Score=394, Evalue=1e-111, Organism=Escherichia coli, GI1790351, Length=333, Percent_Identity=45.945945945946, Blast_Score=295, Evalue=3e-81,
Paralogues:
None
Copy number: 440 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006059 - InterPro: IPR000957 - InterPro: IPR005669 [H]
Pfam domain/function: PF01547 SBP_bac_1 [H]
EC number: NA
Molecular weight: Translated: 36921; Mature: 36921
Theoretical pI: Translated: 6.54; Mature: 6.54
Prosite motif: PS00757 PROK_SULFATE_BIND_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRIKSTLTALLLAGSFQASAADQTILNSSYDIARELFVAYNPVFAEHWQQKTGKTVEIK CCHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHHHHHHHHHHCHHHHHHHHHHCCCEEEEE QSHAGSSAQARSILQGLAADVVTFNQVTDVQILHDKGKLIPANWQTLLPNASSPYYSTTA CCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCEECCCCHHHCCCCCCCCEEEEE FLVRKGNPKNIQDWSDLVRDDVKSVFPNPKTSGNARYTYLAALGFAQKQFGQDNQVQQDE EEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEHHHHHHHHHHHCCCCCCCCHHH FLKKFLANVAVFDTGGRGATTSFVERGIGDVLITFESEVNNIRQQYGADDYQVVVPKTSI HHHHHHHHEEEEECCCCCCHHHHHHCCCCCEEEEEHHHHHHHHHHHCCCCEEEEECCHHH LAEFPVAVVEKVAKRNGTYDVATEYVSYLYSEPAQRLLAEFNYRVHDAKVQAEFAERFPA HHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCC VELLTVEGIAGGWEQAMQTQFANGAKLDQLLRR EEEEEECCCCCHHHHHHHHHHCCCCHHHHHHCC >Mature Secondary Structure MNRIKSTLTALLLAGSFQASAADQTILNSSYDIARELFVAYNPVFAEHWQQKTGKTVEIK CCHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHHHHHHHHHHCHHHHHHHHHHCCCEEEEE QSHAGSSAQARSILQGLAADVVTFNQVTDVQILHDKGKLIPANWQTLLPNASSPYYSTTA CCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCEECCCCHHHCCCCCCCCEEEEE FLVRKGNPKNIQDWSDLVRDDVKSVFPNPKTSGNARYTYLAALGFAQKQFGQDNQVQQDE EEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEHHHHHHHHHHHCCCCCCCCHHH FLKKFLANVAVFDTGGRGATTSFVERGIGDVLITFESEVNNIRQQYGADDYQVVVPKTSI HHHHHHHHEEEEECCCCCCHHHHHHCCCCCEEEEEHHHHHHHHHHHCCCCEEEEECCHHH LAEFPVAVVEKVAKRNGTYDVATEYVSYLYSEPAQRLLAEFNYRVHDAKVQAEFAERFPA HHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCC VELLTVEGIAGGWEQAMQTQFANGAKLDQLLRR EEEEEECCCCCHHHHHHHHHHCCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: SO42- [Periplasm]; H2O; ATP; S2O32- [Periplasm] [C]
Specific reaction: SO42- [Periplasm] + H2O + ATP = SO42- [Cytoplasm] + phosphate + ADP ATP + S2O32- [Periplasm] + H2O = ADP + phosphate + S2O32- [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2188959; 9205837; 9278503; 9298646 [H]