Definition Vibrio cholerae M66-2 chromosome I, complete genome.
Accession NC_012578
Length 2,892,523

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The map label for this gene is 227080638

Identifier: 227080638

GI number: 227080638

Start: 441454

End: 441564

Strand: Direct

Name: 227080638

Synonym: VCM66_0412

Alternate gene names: NA

Gene position: 441454-441564 (Clockwise)

Preceding gene: 227080636

Following gene: 227080643

Centisome position: 15.26

GC content: 36.94

Gene sequence:

>111_bases
TTGTTCGATGAGTTGATTATCGATAATCGTTCTCAGTTATTCAAACAGGCAAAACCAATTAGTGTGATAGGAATCGGTGA
ACAAAAAAGGCGCAATATGCGCCTTGAATAA

Upstream 100 bases:

>100_bases
TGATGACATCGCCTGTCAGTACATACGCTACCGTAAACGCGATGGTAAAGTGTATTGCTGCAAAACTTAATGTCTTTTTC
ATGATTCAGTCCACCTGATC

Downstream 100 bases:

>100_bases
ACGATTGAAGATGAGTGCCGATTAACCTTGTGGTTTGACGACCATGACATTAATAGGCGAATTTTCTACCACTTTACTGG
CCACGGAGCCGAGCATCACT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 36; Mature: 36

Protein sequence:

>36_residues
MFDELIIDNRSQLFKQAKPISVIGIGEQKRRNMRLE

Sequences:

>Translated_36_residues
MFDELIIDNRSQLFKQAKPISVIGIGEQKRRNMRLE
>Mature_36_residues
MFDELIIDNRSQLFKQAKPISVIGIGEQKRRNMRLE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 4275; Mature: 4275

Theoretical pI: Translated: 10.48; Mature: 10.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFDELIIDNRSQLFKQAKPISVIGIGEQKRRNMRLE
CCCCCEECCHHHHHHCCCCEEEEECCCHHCCCCCCC
>Mature Secondary Structure
MFDELIIDNRSQLFKQAKPISVIGIGEQKRRNMRLE
CCCCCEECCHHHHHHCCCCEEEEECCCHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA