| Definition | Vibrio cholerae M66-2 chromosome I, complete genome. |
|---|---|
| Accession | NC_012578 |
| Length | 2,892,523 |
Click here to switch to the map view.
The map label for this gene is maf [C]
Identifier: 227080629
GI number: 227080629
Start: 429290
End: 429907
Strand: Direct
Name: maf [C]
Synonym: VCM66_0403
Alternate gene names: 227080629
Gene position: 429290-429907 (Clockwise)
Preceding gene: 227080628
Following gene: 227080630
Centisome position: 14.84
GC content: 51.29
Gene sequence:
>618_bases TTGGCCGTGGATGTTTTTATTACTGCGCCGAGTTCGACGCCATTGGCATGTGAAATGACAATATCGAAATTAGTGTTGGC TTCGGGATCCCCTAGACGTCGTGAACTGCTCGCTCAAATGGGCTACCAGTTTGAAGTCGTGGTTCCGAATGTCGAAGAGA AACGCGCAGCGGCTGAGTCGCCAGCGCAATATGTTGAACGGCTTTCTCGCGATAAAGCCTTAGCGGGAGCGGCCTTGGTC GCGGCCGAGGCGGTCGTGATTGGTTCAGATACGATAGTTGTGAAAGATCAACAGGTGTTGGAAAAGCCGCGTGATTTTGC TGATGCAAAACGCATGTTACTCAAACTTTCCGGTAGCCAACACCAAGTGATGACCGGGGTGAGTGTGACTTGCCGCGGCA TCACTCACTCCGTGGTGGTGACCACGGAGGTGTGGTTTAAAACTTTGTCAGAACAAGAAATAGAAGCCTATTGGCAAAGT GGTGAGCCCTGCGATAAAGCTGGCAGTTACGGCATTCAGGGATTGGGTGGACGATTTGTTACGAGGATTGAAGGCAGCTA CCACGCGGTAGTCGGATTGCCACTCTACGAGACTGACCAGCTTCTGCACAAATTCTAA
Upstream 100 bases:
>100_bases CGATGGGATTGGAAGTGCTGATTTTCTGTGGTGAGTACCTGATCCAGAATGTGACATTCAATCCGTTGTCACTCTGGAGT GGAGTGATTGCCTGTATACT
Downstream 100 bases:
>100_bases TCATTTTAATCATTGAGGTGCGCTCATGAGTGCAGAGTTGCTGTTAAACGTCACCCCGAGTGAAACTCGGGTGGCGATGA TTGAAGGGGGAATCCTTCAG
Product: Maf-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 205; Mature: 204
Protein sequence:
>205_residues MAVDVFITAPSSTPLACEMTISKLVLASGSPRRRELLAQMGYQFEVVVPNVEEKRAAAESPAQYVERLSRDKALAGAALV AAEAVVIGSDTIVVKDQQVLEKPRDFADAKRMLLKLSGSQHQVMTGVSVTCRGITHSVVVTTEVWFKTLSEQEIEAYWQS GEPCDKAGSYGIQGLGGRFVTRIEGSYHAVVGLPLYETDQLLHKF
Sequences:
>Translated_205_residues MAVDVFITAPSSTPLACEMTISKLVLASGSPRRRELLAQMGYQFEVVVPNVEEKRAAAESPAQYVERLSRDKALAGAALV AAEAVVIGSDTIVVKDQQVLEKPRDFADAKRMLLKLSGSQHQVMTGVSVTCRGITHSVVVTTEVWFKTLSEQEIEAYWQS GEPCDKAGSYGIQGLGGRFVTRIEGSYHAVVGLPLYETDQLLHKF >Mature_204_residues AVDVFITAPSSTPLACEMTISKLVLASGSPRRRELLAQMGYQFEVVVPNVEEKRAAAESPAQYVERLSRDKALAGAALVA AEAVVIGSDTIVVKDQQVLEKPRDFADAKRMLLKLSGSQHQVMTGVSVTCRGITHSVVVTTEVWFKTLSEQEIEAYWQSG EPCDKAGSYGIQGLGGRFVTRIEGSYHAVVGLPLYETDQLLHKF
Specific function: Unknown
COG id: COG0424
COG function: function code D; Nucleotide-binding protein implicated in inhibition of septum formation
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the maf family [H]
Homologues:
Organism=Homo sapiens, GI117553627, Length=197, Percent_Identity=42.6395939086294, Blast_Score=132, Evalue=3e-31, Organism=Homo sapiens, GI291045183, Length=192, Percent_Identity=39.5833333333333, Blast_Score=115, Evalue=3e-26, Organism=Homo sapiens, GI291045181, Length=122, Percent_Identity=48.3606557377049, Blast_Score=100, Evalue=7e-22, Organism=Homo sapiens, GI310133124, Length=122, Percent_Identity=47.5409836065574, Blast_Score=100, Evalue=8e-22, Organism=Escherichia coli, GI1789646, Length=185, Percent_Identity=55.6756756756757, Blast_Score=199, Evalue=1e-52, Organism=Escherichia coli, GI87081830, Length=187, Percent_Identity=35.8288770053476, Blast_Score=100, Evalue=6e-23, Organism=Caenorhabditis elegans, GI193202443, Length=186, Percent_Identity=34.9462365591398, Blast_Score=98, Evalue=3e-21, Organism=Drosophila melanogaster, GI78706856, Length=181, Percent_Identity=36.4640883977901, Blast_Score=120, Evalue=8e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003697 [H]
Pfam domain/function: PF02545 Maf [H]
EC number: NA
Molecular weight: Translated: 22330; Mature: 22199
Theoretical pI: Translated: 6.12; Mature: 6.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVDVFITAPSSTPLACEMTISKLVLASGSPRRRELLAQMGYQFEVVVPNVEEKRAAAES CEEEEEEECCCCCCEEEHHHHHHHHHCCCCCHHHHHHHHCCCEEEEEECCCHHHHHHCCC PAQYVERLSRDKALAGAALVAAEAVVIGSDTIVVKDQQVLEKPRDFADAKRMLLKLSGSQ HHHHHHHHHHHHHHHHHHHHHHEEEEECCCEEEECCHHHHHCCCCHHHHHHHHHHHCCCC HQVMTGVSVTCRGITHSVVVTTEVWFKTLSEQEIEAYWQSGEPCDKAGSYGIQGLGGRFV EEEEECCEEEECCCEEEEEEEHHHHHHHHCHHHHHHHHCCCCCCCCCCCCCCCCCCCEEE TRIEGSYHAVVGLPLYETDQLLHKF EEECCCEEEEEECCCHHHHHHHHCC >Mature Secondary Structure AVDVFITAPSSTPLACEMTISKLVLASGSPRRRELLAQMGYQFEVVVPNVEEKRAAAES EEEEEEECCCCCCEEEHHHHHHHHHCCCCCHHHHHHHHCCCEEEEEECCCHHHHHHCCC PAQYVERLSRDKALAGAALVAAEAVVIGSDTIVVKDQQVLEKPRDFADAKRMLLKLSGSQ HHHHHHHHHHHHHHHHHHHHHHEEEEECCCEEEECCHHHHHCCCCHHHHHHHHHHHCCCC HQVMTGVSVTCRGITHSVVVTTEVWFKTLSEQEIEAYWQSGEPCDKAGSYGIQGLGGRFV EEEEECCEEEECCCEEEEEEEHHHHHHHHCHHHHHHHHCCCCCCCCCCCCCCCCCCCEEE TRIEGSYHAVVGLPLYETDQLLHKF EEECCCEEEEEECCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10952301 [H]