| Definition | Vibrio cholerae M66-2 chromosome I, complete genome. |
|---|---|
| Accession | NC_012578 |
| Length | 2,892,523 |
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The map label for this gene is fusA-1 [H]
Identifier: 227080573
GI number: 227080573
Start: 364268
End: 366364
Strand: Direct
Name: fusA-1 [H]
Synonym: VCM66_0345
Alternate gene names: 227080573
Gene position: 364268-366364 (Clockwise)
Preceding gene: 227080572
Following gene: 227080574
Centisome position: 12.59
GC content: 47.78
Gene sequence:
>2097_bases GTGGCTCGTAAAACTCCTATTGAGCGCTACCGTAACATCGGTATCTGTGCTCACGTAGATGCAGGAAAAACAACCACTAC TGAGCGTATTCTGTTCTACACTGGCCTCTCTCACAAAATTGGCGAAGTTCACGACGGTGCTGCGACTATGGACTGGATGG TCCAAGAGCAAGAGCGTGGTATTACCATTACCTCTGCGGCCACCACCACCTTCTGGCGTGGTATGGAAGCGCAATTCCAA GAACATCGCATCAACATCATTGATACCCCTGGACACGTTGACTTTACGATCGAAGTAGAGCGTTCACTTCGTGTGCTTGA TGGTGCAGTGGTCGTATTCTGTGGCACATCAGGTGTTGAACCTCAGTCTGAAACCGTTTGGCGTCAAGCTGACAAATACG GCGTTCCACGCATGGTATTCGTCAACAAAATGGACCGTGCCGGTGCAGATTTCTTACGCGTAGTAGGCCAAATTAAACAT CGTCTTGGTGCGAACCCTGTTCCTATCCAACTCAACATTGGTGCAGAAGAAGAGTTCAAAGGTGTCATCGACCTTATCAA GATGAAAGCCATCAACTGGAATGAAGCCGATCAAGGCATGAGCTTCACTTATGAAGAAATTCCTGCGGATATGCTTGAGC TTGCCCAAGAGTGGCGTAACCACCTTGTGGAAGCCGCAGCCGAAGCCAGTGAAGAGTTGATGGAAAAATACCTTGAAGAT GGTGAACTTAGCGAAGTAGAGATCAAACAAGCTCTGCGTCAGCGCACCATCAATAACGAAATTGTTCTCGCAGCTTGTGG TAGTGCATTTAAGAACAAAGGCGTGCAAGCAGTTCTGGATGCGGTGATTGAGTTTCTACCATCACCAACCGATGTTCCTG CGATCAAAGGTATTGATGATCGAGAAAACAGTGTTGAGCGTCATGCTGACGATAACGAACCGTTTTCTTCACTCGCGTTT AAGATTGCTACCGATCCTTTTGTTGGCTCGCTGACCTTTATTCGCGTCTACTCTGGAGTGGTTAACTCGGGTGATGCGGT TTATAACTCAGTGAAGCAAAAGAAAGAGCGCTTTGGCCGTATCGTACAGATGCATGCTAACAAGCGTGATGAAATCAAAG AGATTCGTGCGGGTGACATCGCTGCGGCTATCGGCCTGAAAGATGTGACTACGGGCGATACTTTGTGTGATCCGAATCAT GTTGTGATTCTGGAGCGTATGGAGTTCCCTGAACCAGTAATTCAGATCGCAGTAGAGCCTCGCTCTAAAGCTGATCAGGA AAAAATGGGTATTGCTTTAGGTAAACTCGCAGCAGAAGACCCATCATTCCGCGTTGAGACTGACGCTGAGACGGGTCAAA CGCTGATTTCTGGTATGGGTGAGCTTCACCTAGATATTATCGTCGATCGCATGAAACGTGAGTTTGGTGTCGATTGTAAC GTAGGTAAACCTCAGGTGGCTTACCGTGAAACCATTCGTGGTAAATCGGAAGTGGAAGGTAAGTTCGTTCGTCAGTCAGG TGGTCGTGGTCAATACGGTCACGTATGGCTGAAAATTGAACCTGCTGAGCCTGGTCAAGGTTTTGTCTTCGTTGACGCAA TCGCGGGTGGTGTGATTCCAAAAGAATTTATCAACCCAGTTGCGAAAGGTATCGAGGAGCAAATGAACAACGGTGTGTTA GCGGGCTATCCAGTGCTGGATGTCAAAGCTACCCTGTTTGATGGTTCATTCCACGATGTCGACTCCAGCGAAATGGCGTT TAAAATCGCTGGTTCTATGGCATTCAAGAAAGGTGCGCTTGAAGCTCAACCTGTTCTTCTTGAGCCGTTAATGAAAGTTG AAATAACCACTCCAGAAGACTGGATGGGTGATGTTGTGGGTGACTTAAACCGTCGTCGTGGCATCATCGAAGGTATGGAT GAAGGCCCTGCGGGACTGAAAATCATCCACGCTAAAGTCCCATTGTCTGAGATGTTTGGTTATGCAACTGACCTGCGTTC TGCCACACAAGGCCGTGCTTCTTACTCTATGGAGTTTGCTGAGTACGCTGATGTGCCGAAAAATATTGCTGACGCAATTA TCGCAGAGCGTGGTTAA
Upstream 100 bases:
>100_bases AGCGTTCGCTCATTACCGCTGGTAATACCTTCTGTGCTGCGAGGTTCTCTCGCAGCACATTTCTATTTTCTAAGGTTGAC CTTAGTAAGAGGATACAATC
Downstream 100 bases:
>100_bases CCGTTGTTTGGTTAATAACGAATCTATTGCGCTGACGTGAGTTGGCGCATAAAATAGCAATTTCTGGCGCGCCTTGGGTA CTGCTTACCCAAAGCGAATC
Product: elongation factor G
Products: GDP; phosphate
Alternate protein names: EF-G 1 [H]
Number of amino acids: Translated: 698; Mature: 697
Protein sequence:
>698_residues MARKTPIERYRNIGICAHVDAGKTTTTERILFYTGLSHKIGEVHDGAATMDWMVQEQERGITITSAATTTFWRGMEAQFQ EHRINIIDTPGHVDFTIEVERSLRVLDGAVVVFCGTSGVEPQSETVWRQADKYGVPRMVFVNKMDRAGADFLRVVGQIKH RLGANPVPIQLNIGAEEEFKGVIDLIKMKAINWNEADQGMSFTYEEIPADMLELAQEWRNHLVEAAAEASEELMEKYLED GELSEVEIKQALRQRTINNEIVLAACGSAFKNKGVQAVLDAVIEFLPSPTDVPAIKGIDDRENSVERHADDNEPFSSLAF KIATDPFVGSLTFIRVYSGVVNSGDAVYNSVKQKKERFGRIVQMHANKRDEIKEIRAGDIAAAIGLKDVTTGDTLCDPNH VVILERMEFPEPVIQIAVEPRSKADQEKMGIALGKLAAEDPSFRVETDAETGQTLISGMGELHLDIIVDRMKREFGVDCN VGKPQVAYRETIRGKSEVEGKFVRQSGGRGQYGHVWLKIEPAEPGQGFVFVDAIAGGVIPKEFINPVAKGIEEQMNNGVL AGYPVLDVKATLFDGSFHDVDSSEMAFKIAGSMAFKKGALEAQPVLLEPLMKVEITTPEDWMGDVVGDLNRRRGIIEGMD EGPAGLKIIHAKVPLSEMFGYATDLRSATQGRASYSMEFAEYADVPKNIADAIIAERG
Sequences:
>Translated_698_residues MARKTPIERYRNIGICAHVDAGKTTTTERILFYTGLSHKIGEVHDGAATMDWMVQEQERGITITSAATTTFWRGMEAQFQ EHRINIIDTPGHVDFTIEVERSLRVLDGAVVVFCGTSGVEPQSETVWRQADKYGVPRMVFVNKMDRAGADFLRVVGQIKH RLGANPVPIQLNIGAEEEFKGVIDLIKMKAINWNEADQGMSFTYEEIPADMLELAQEWRNHLVEAAAEASEELMEKYLED GELSEVEIKQALRQRTINNEIVLAACGSAFKNKGVQAVLDAVIEFLPSPTDVPAIKGIDDRENSVERHADDNEPFSSLAF KIATDPFVGSLTFIRVYSGVVNSGDAVYNSVKQKKERFGRIVQMHANKRDEIKEIRAGDIAAAIGLKDVTTGDTLCDPNH VVILERMEFPEPVIQIAVEPRSKADQEKMGIALGKLAAEDPSFRVETDAETGQTLISGMGELHLDIIVDRMKREFGVDCN VGKPQVAYRETIRGKSEVEGKFVRQSGGRGQYGHVWLKIEPAEPGQGFVFVDAIAGGVIPKEFINPVAKGIEEQMNNGVL AGYPVLDVKATLFDGSFHDVDSSEMAFKIAGSMAFKKGALEAQPVLLEPLMKVEITTPEDWMGDVVGDLNRRRGIIEGMD EGPAGLKIIHAKVPLSEMFGYATDLRSATQGRASYSMEFAEYADVPKNIADAIIAERG >Mature_697_residues ARKTPIERYRNIGICAHVDAGKTTTTERILFYTGLSHKIGEVHDGAATMDWMVQEQERGITITSAATTTFWRGMEAQFQE HRINIIDTPGHVDFTIEVERSLRVLDGAVVVFCGTSGVEPQSETVWRQADKYGVPRMVFVNKMDRAGADFLRVVGQIKHR LGANPVPIQLNIGAEEEFKGVIDLIKMKAINWNEADQGMSFTYEEIPADMLELAQEWRNHLVEAAAEASEELMEKYLEDG ELSEVEIKQALRQRTINNEIVLAACGSAFKNKGVQAVLDAVIEFLPSPTDVPAIKGIDDRENSVERHADDNEPFSSLAFK IATDPFVGSLTFIRVYSGVVNSGDAVYNSVKQKKERFGRIVQMHANKRDEIKEIRAGDIAAAIGLKDVTTGDTLCDPNHV VILERMEFPEPVIQIAVEPRSKADQEKMGIALGKLAAEDPSFRVETDAETGQTLISGMGELHLDIIVDRMKREFGVDCNV GKPQVAYRETIRGKSEVEGKFVRQSGGRGQYGHVWLKIEPAEPGQGFVFVDAIAGGVIPKEFINPVAKGIEEQMNNGVLA GYPVLDVKATLFDGSFHDVDSSEMAFKIAGSMAFKKGALEAQPVLLEPLMKVEITTPEDWMGDVVGDLNRRRGIIEGMDE GPAGLKIIHAKVPLSEMFGYATDLRSATQGRASYSMEFAEYADVPKNIADAIIAERG
Specific function: Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and
COG id: COG0480
COG function: function code J; Translation elongation factors (GTPases)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP-binding elongation factor family. EF-G/EF-2 subfamily [H]
Homologues:
Organism=Homo sapiens, GI18390331, Length=702, Percent_Identity=43.1623931623932, Blast_Score=558, Evalue=1e-159, Organism=Homo sapiens, GI19923640, Length=717, Percent_Identity=38.4937238493724, Blast_Score=455, Evalue=1e-128, Organism=Homo sapiens, GI25306287, Length=716, Percent_Identity=36.731843575419, Blast_Score=410, Evalue=1e-114, Organism=Homo sapiens, GI25306283, Length=455, Percent_Identity=40.4395604395604, Blast_Score=311, Evalue=1e-84, Organism=Homo sapiens, GI4503483, Length=487, Percent_Identity=25.0513347022587, Blast_Score=105, Evalue=1e-22, Organism=Homo sapiens, GI157426893, Length=153, Percent_Identity=35.2941176470588, Blast_Score=98, Evalue=3e-20, Organism=Homo sapiens, GI94966754, Length=138, Percent_Identity=38.4057971014493, Blast_Score=91, Evalue=3e-18, Organism=Homo sapiens, GI310132016, Length=120, Percent_Identity=38.3333333333333, Blast_Score=78, Evalue=2e-14, Organism=Homo sapiens, GI310110807, Length=120, Percent_Identity=38.3333333333333, Blast_Score=78, Evalue=2e-14, Organism=Homo sapiens, GI310123363, Length=120, Percent_Identity=38.3333333333333, Blast_Score=78, Evalue=2e-14, Organism=Homo sapiens, GI217272892, Length=139, Percent_Identity=32.3741007194245, Blast_Score=70, Evalue=7e-12, Organism=Homo sapiens, GI217272894, Length=139, Percent_Identity=32.3741007194245, Blast_Score=70, Evalue=7e-12, Organism=Escherichia coli, GI1789738, Length=704, Percent_Identity=73.2954545454545, Blast_Score=1070, Evalue=0.0, Organism=Escherichia coli, GI1790835, Length=490, Percent_Identity=25.3061224489796, Blast_Score=139, Evalue=6e-34, Organism=Escherichia coli, GI48994988, Length=152, Percent_Identity=40.7894736842105, Blast_Score=104, Evalue=2e-23, Organism=Escherichia coli, GI1788922, Length=154, Percent_Identity=37.6623376623377, Blast_Score=91, Evalue=2e-19, Organism=Caenorhabditis elegans, GI17533571, Length=703, Percent_Identity=40.398293029872, Blast_Score=500, Evalue=1e-142, Organism=Caenorhabditis elegans, GI17556745, Length=733, Percent_Identity=29.8772169167804, Blast_Score=306, Evalue=3e-83, Organism=Caenorhabditis elegans, GI17506493, Length=488, Percent_Identity=25.6147540983607, Blast_Score=108, Evalue=1e-23, Organism=Caenorhabditis elegans, GI17557151, Length=163, Percent_Identity=37.4233128834356, Blast_Score=96, Evalue=8e-20, Organism=Caenorhabditis elegans, GI71988819, Length=147, Percent_Identity=33.3333333333333, Blast_Score=75, Evalue=1e-13, Organism=Caenorhabditis elegans, GI71988811, Length=147, Percent_Identity=33.3333333333333, Blast_Score=75, Evalue=1e-13, Organism=Saccharomyces cerevisiae, GI6323098, Length=693, Percent_Identity=41.5584415584416, Blast_Score=547, Evalue=1e-156, Organism=Saccharomyces cerevisiae, GI6322359, Length=797, Percent_Identity=31.7440401505646, Blast_Score=375, Evalue=1e-105, Organism=Saccharomyces cerevisiae, GI6324707, Length=799, Percent_Identity=25.4067584480601, Blast_Score=174, Evalue=4e-44, Organism=Saccharomyces cerevisiae, GI6320593, Length=799, Percent_Identity=25.4067584480601, Blast_Score=174, Evalue=4e-44, Organism=Saccharomyces cerevisiae, GI6323320, Length=155, Percent_Identity=33.5483870967742, Blast_Score=92, Evalue=2e-19, Organism=Saccharomyces cerevisiae, GI6324166, Length=145, Percent_Identity=37.9310344827586, Blast_Score=83, Evalue=1e-16, Organism=Saccharomyces cerevisiae, GI6324761, Length=135, Percent_Identity=34.8148148148148, Blast_Score=64, Evalue=6e-11, Organism=Drosophila melanogaster, GI24582462, Length=705, Percent_Identity=43.8297872340426, Blast_Score=577, Evalue=1e-164, Organism=Drosophila melanogaster, GI221458488, Length=733, Percent_Identity=33.5607094133697, Blast_Score=373, Evalue=1e-103, Organism=Drosophila melanogaster, GI78706572, Length=186, Percent_Identity=34.9462365591398, Blast_Score=100, Evalue=2e-21, Organism=Drosophila melanogaster, GI24585711, Length=480, Percent_Identity=24.7916666666667, Blast_Score=100, Evalue=3e-21, Organism=Drosophila melanogaster, GI24585713, Length=480, Percent_Identity=24.7916666666667, Blast_Score=100, Evalue=3e-21, Organism=Drosophila melanogaster, GI24585709, Length=480, Percent_Identity=24.7916666666667, Blast_Score=100, Evalue=3e-21, Organism=Drosophila melanogaster, GI28574573, Length=142, Percent_Identity=38.0281690140845, Blast_Score=86, Evalue=7e-17,
Paralogues:
None
Copy number: 1080 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2520 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 7984 Molecules/Cell In: Growth Phase, Gl
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009022 - InterPro: IPR000795 - InterPro: IPR020568 - InterPro: IPR014721 - InterPro: IPR005225 - InterPro: IPR004540 - InterPro: IPR000640 - InterPro: IPR005517 - InterPro: IPR004161 - InterPro: IPR009000 [H]
Pfam domain/function: PF00679 EFG_C; PF03764 EFG_IV; PF00009 GTP_EFTU; PF03144 GTP_EFTU_D2 [H]
EC number: 3.6.5.3
Molecular weight: Translated: 76947; Mature: 76816
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: PS00301 EFACTOR_GTP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARKTPIERYRNIGICAHVDAGKTTTTERILFYTGLSHKIGEVHDGAATMDWMVQEQERG CCCCCCHHHHCCCCEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCC ITITSAATTTFWRGMEAQFQEHRINIIDTPGHVDFTIEVERSLRVLDGAVVVFCGTSGVE EEEEECHHHHHHCCHHHHHHHCCEEEEECCCCEEEEEEECCHHHHCCCEEEEEECCCCCC PQSETVWRQADKYGVPRMVFVNKMDRAGADFLRVVGQIKHRLGANPVPIQLNIGAEEEFK CCHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHH GVIDLIKMKAINWNEADQGMSFTYEEIPADMLELAQEWRNHLVEAAAEASEELMEKYLED HHHHHHHHHCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GELSEVEIKQALRQRTINNEIVLAACGSAFKNKGVQAVLDAVIEFLPSPTDVPAIKGIDD CCCCHHHHHHHHHHHCCCCCEEEEECCCHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCC RENSVERHADDNEPFSSLAFKIATDPFVGSLTFIRVYSGVVNSGDAVYNSVKQKKERFGR CHHHHHHCCCCCCCHHHHEEEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH IVQMHANKRDEIKEIRAGDIAAAIGLKDVTTGDTLCDPNHVVILERMEFPEPVIQIAVEP HHHHHCCCHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEECC RSKADQEKMGIALGKLAAEDPSFRVETDAETGQTLISGMGELHLDIIVDRMKREFGVDCN CCCCCHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCC VGKPQVAYRETIRGKSEVEGKFVRQSGGRGQYGHVWLKIEPAEPGQGFVFVDAIAGGVIP CCCCCHHHHHHHCCCHHHCCHHHHCCCCCCCCCEEEEEEEECCCCCCEEEEEEHHCCCCC KEFINPVAKGIEEQMNNGVLAGYPVLDVKATLFDGSFHDVDSSEMAFKIAGSMAFKKGAL HHHHHHHHHHHHHHHCCCEEECCCEEEEEEEEECCCCCCCCCCHHEEEEHHHHHHHCCCC EAQPVLLEPLMKVEITTPEDWMGDVVGDLNRRRGIIEGMDEGPAGLKIIHAKVPLSEMFG CCCCHHHCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCHHHHHH YATDLRSATQGRASYSMEFAEYADVPKNIADAIIAERG HHHHHHHHHCCCHHHCCHHHHHHCCCHHHHHHHHHCCC >Mature Secondary Structure ARKTPIERYRNIGICAHVDAGKTTTTERILFYTGLSHKIGEVHDGAATMDWMVQEQERG CCCCCHHHHCCCCEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCC ITITSAATTTFWRGMEAQFQEHRINIIDTPGHVDFTIEVERSLRVLDGAVVVFCGTSGVE EEEEECHHHHHHCCHHHHHHHCCEEEEECCCCEEEEEEECCHHHHCCCEEEEEECCCCCC PQSETVWRQADKYGVPRMVFVNKMDRAGADFLRVVGQIKHRLGANPVPIQLNIGAEEEFK CCHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHH GVIDLIKMKAINWNEADQGMSFTYEEIPADMLELAQEWRNHLVEAAAEASEELMEKYLED HHHHHHHHHCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GELSEVEIKQALRQRTINNEIVLAACGSAFKNKGVQAVLDAVIEFLPSPTDVPAIKGIDD CCCCHHHHHHHHHHHCCCCCEEEEECCCHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCC RENSVERHADDNEPFSSLAFKIATDPFVGSLTFIRVYSGVVNSGDAVYNSVKQKKERFGR CHHHHHHCCCCCCCHHHHEEEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH IVQMHANKRDEIKEIRAGDIAAAIGLKDVTTGDTLCDPNHVVILERMEFPEPVIQIAVEP HHHHHCCCHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEECC RSKADQEKMGIALGKLAAEDPSFRVETDAETGQTLISGMGELHLDIIVDRMKREFGVDCN CCCCCHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCC VGKPQVAYRETIRGKSEVEGKFVRQSGGRGQYGHVWLKIEPAEPGQGFVFVDAIAGGVIP CCCCCHHHHHHHCCCHHHCCHHHHCCCCCCCCCEEEEEEEECCCCCCEEEEEEHHCCCCC KEFINPVAKGIEEQMNNGVLAGYPVLDVKATLFDGSFHDVDSSEMAFKIAGSMAFKKGAL HHHHHHHHHHHHHHHCCCEEECCCEEEEEEEEECCCCCCCCCCHHEEEEHHHHHHHCCCC EAQPVLLEPLMKVEITTPEDWMGDVVGDLNRRRGIIEGMDEGPAGLKIIHAKVPLSEMFG CCCCHHHCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCHHHHHH YATDLRSATQGRASYSMEFAEYADVPKNIADAIIAERG HHHHHHHHHCCCHHHCCHHHHHHCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: GTP; H2O
Specific reaction: GTP + H2O = GDP + phosphate
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10952301 [H]