Definition Vibrio cholerae M66-2 chromosome I, complete genome.
Accession NC_012578
Length 2,892,523

Click here to switch to the map view.

The map label for this gene is yhhM [C]

Identifier: 227080376

GI number: 227080376

Start: 133396

End: 133725

Strand: Reverse

Name: yhhM [C]

Synonym: VCM66_0140

Alternate gene names: 227080376

Gene position: 133725-133396 (Counterclockwise)

Preceding gene: 227080380

Following gene: 227080375

Centisome position: 4.62

GC content: 45.45

Gene sequence:

>330_bases
ATGCCCTTCACTTTATTGATCAGTTTAGCGTTATTGATTATTGCGGCAGTTTGGTTTTTTAGCCACTTCTACCGCCGCCA
CATGCAAGGAGAAAATGCTCCACAGCGTAGTGCCGAAGTGACCATACTGGATAAGCAAGCGATCGACATTCCTCACCCTC
TTCCCGGCCAAGATGACCAAGAGTTTTGGATTTACGTACAAAAAGGACGTTTAGGGCCAAAACGCGAGTTTCAGGTTGGC
ATTCATTACTATCATGCACTCAATCCAGGAGACAAAGGCGTACTAACTTACCAAGGACAACGCTTTTTGCACTTTGCCTT
GAAGCGTTAA

Upstream 100 bases:

>100_bases
ATCCCTTTGATTACTGCCGCACATCTCTTTCTCACCACAAACTGCTTGGAAAAATACGTCATTCGCTAAAATAGCGGCGT
ATTCAGAATAGGAGGCTGTT

Downstream 100 bases:

>100_bases
AATCTGGTTCTTGAGAACAGCCATTAAGACGATTAAACCATACTCTTTATAATGGATTAATAGTCTATGCCTATCAGAAA
AATCAGATAATCCAAATTTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 109; Mature: 108

Protein sequence:

>109_residues
MPFTLLISLALLIIAAVWFFSHFYRRHMQGENAPQRSAEVTILDKQAIDIPHPLPGQDDQEFWIYVQKGRLGPKREFQVG
IHYYHALNPGDKGVLTYQGQRFLHFALKR

Sequences:

>Translated_109_residues
MPFTLLISLALLIIAAVWFFSHFYRRHMQGENAPQRSAEVTILDKQAIDIPHPLPGQDDQEFWIYVQKGRLGPKREFQVG
IHYYHALNPGDKGVLTYQGQRFLHFALKR
>Mature_108_residues
PFTLLISLALLIIAAVWFFSHFYRRHMQGENAPQRSAEVTILDKQAIDIPHPLPGQDDQEFWIYVQKGRLGPKREFQVGI
HYYHALNPGDKGVLTYQGQRFLHFALKR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12705; Mature: 12574

Theoretical pI: Translated: 9.78; Mature: 9.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPFTLLISLALLIIAAVWFFSHFYRRHMQGENAPQRSAEVTILDKQAIDIPHPLPGQDDQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCC
EFWIYVQKGRLGPKREFQVGIHYYHALNPGDKGVLTYQGQRFLHFALKR
EEEEEEECCCCCCCCEEEEEEEEEEEECCCCCCEEEECCCEEEEEEECC
>Mature Secondary Structure 
PFTLLISLALLIIAAVWFFSHFYRRHMQGENAPQRSAEVTILDKQAIDIPHPLPGQDDQ
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCC
EFWIYVQKGRLGPKREFQVGIHYYHALNPGDKGVLTYQGQRFLHFALKR
EEEEEEECCCCCCCCEEEEEEEEEEEECCCCCCEEEECCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA