| Definition | Vibrio cholerae M66-2 chromosome I, complete genome. |
|---|---|
| Accession | NC_012578 |
| Length | 2,892,523 |
Click here to switch to the map view.
The map label for this gene is yhhM [C]
Identifier: 227080376
GI number: 227080376
Start: 133396
End: 133725
Strand: Reverse
Name: yhhM [C]
Synonym: VCM66_0140
Alternate gene names: 227080376
Gene position: 133725-133396 (Counterclockwise)
Preceding gene: 227080380
Following gene: 227080375
Centisome position: 4.62
GC content: 45.45
Gene sequence:
>330_bases ATGCCCTTCACTTTATTGATCAGTTTAGCGTTATTGATTATTGCGGCAGTTTGGTTTTTTAGCCACTTCTACCGCCGCCA CATGCAAGGAGAAAATGCTCCACAGCGTAGTGCCGAAGTGACCATACTGGATAAGCAAGCGATCGACATTCCTCACCCTC TTCCCGGCCAAGATGACCAAGAGTTTTGGATTTACGTACAAAAAGGACGTTTAGGGCCAAAACGCGAGTTTCAGGTTGGC ATTCATTACTATCATGCACTCAATCCAGGAGACAAAGGCGTACTAACTTACCAAGGACAACGCTTTTTGCACTTTGCCTT GAAGCGTTAA
Upstream 100 bases:
>100_bases ATCCCTTTGATTACTGCCGCACATCTCTTTCTCACCACAAACTGCTTGGAAAAATACGTCATTCGCTAAAATAGCGGCGT ATTCAGAATAGGAGGCTGTT
Downstream 100 bases:
>100_bases AATCTGGTTCTTGAGAACAGCCATTAAGACGATTAAACCATACTCTTTATAATGGATTAATAGTCTATGCCTATCAGAAA AATCAGATAATCCAAATTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 109; Mature: 108
Protein sequence:
>109_residues MPFTLLISLALLIIAAVWFFSHFYRRHMQGENAPQRSAEVTILDKQAIDIPHPLPGQDDQEFWIYVQKGRLGPKREFQVG IHYYHALNPGDKGVLTYQGQRFLHFALKR
Sequences:
>Translated_109_residues MPFTLLISLALLIIAAVWFFSHFYRRHMQGENAPQRSAEVTILDKQAIDIPHPLPGQDDQEFWIYVQKGRLGPKREFQVG IHYYHALNPGDKGVLTYQGQRFLHFALKR >Mature_108_residues PFTLLISLALLIIAAVWFFSHFYRRHMQGENAPQRSAEVTILDKQAIDIPHPLPGQDDQEFWIYVQKGRLGPKREFQVGI HYYHALNPGDKGVLTYQGQRFLHFALKR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12705; Mature: 12574
Theoretical pI: Translated: 9.78; Mature: 9.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFTLLISLALLIIAAVWFFSHFYRRHMQGENAPQRSAEVTILDKQAIDIPHPLPGQDDQ CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCC EFWIYVQKGRLGPKREFQVGIHYYHALNPGDKGVLTYQGQRFLHFALKR EEEEEEECCCCCCCCEEEEEEEEEEEECCCCCCEEEECCCEEEEEEECC >Mature Secondary Structure PFTLLISLALLIIAAVWFFSHFYRRHMQGENAPQRSAEVTILDKQAIDIPHPLPGQDDQ CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCC EFWIYVQKGRLGPKREFQVGIHYYHALNPGDKGVLTYQGQRFLHFALKR EEEEEEECCCCCCCCEEEEEEEEEEEECCCCCCEEEECCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA