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The map label for this gene is lypA [H]

Identifier: 227080371

GI number: 227080371

Start: 129622

End: 130638

Strand: Reverse

Name: lypA [H]

Synonym: VCM66_0135

Alternate gene names: 227080371

Gene position: 130638-129622 (Counterclockwise)

Preceding gene: 227080374

Following gene: 227080370

Centisome position: 4.52

GC content: 47.0

Gene sequence:

>1017_bases
ATGAACCCTGAAAAAAATCTTTATCCTTATACGCAAGAGTCGAGTTTGGAGCAAGCTCTCAACTTTGAGATAGCTCAAGT
GTGGCACACTCGAAGCGAAGGAACCTATCGCAGTTTTGATAAAACGCACATTTATTGGTGTAGTCTCAAGCATCCTGAGC
ATCAAAAAGCCGTAGTGATTGTGAATGGCAGGATTGAATCTGCGTGGAAATATCAAGAGCTGTGTTATGACCTATTCCGC
CAAGGTTTTGATGTTTATACCTATGATCACCGTGGTCAAGGACGGTCAGAACGTCTGACTGAAGATAGACAAATAGGCCA
TGTACATGAGTTTCAAGATTACGTGACTGACTTAAAAGCCTTAGTCGAGCATTTCGATCTCGGTCACTACCAAGAGCGCT
TTTTATTAGCCCATTCTATGGGTGGCGCGATTGCTACGCGCTATATCCAGACCACTCCAGCGCACCCCTTTAGCGCACTG
GCCCTGAGTGCTCCGATGTTTGGCGTGAATATGCCTTGGTATTTAAGGCCATGGGCTTTGCTCATCACTCAAATTATGGC
TGCCGTTACCCTAAAACCCAGTTACGCTCCGGGTTATGGCCCTTATCACGCTAAACCCTTTCATCTCAACCTGCTCACCC
ACAGTGAAACCCGCTATCAGTTGTTTCGTGAACTGTATGAAGCGCACCCTGAACTGCAAATTGGAGGGCCGAGTCACCGC
TGGGTTTGGCAGAGCTTAATGGCGACCAAACAGTGTTTGCAGTTAACCCGACAAATCAAAATCCCCATGCTGATCTTACA
AGCTGGCGAAGAAGCGATTGTGTGTAATCGGGCGCAAATCCGGCTCTTCAAAAAGCTGTCTCGCACCCAAAAACGTGCCG
CTTTATGCCGCATAGCAGGAGCCAGACATGAACTGCTTTTTGAACAAGATGCCTACCGAAATCAGACGTTAGACCATATT
TTGCGTTTTTTCGCCGACAGTACTATCGACCATAAAAGACAGCACCATCGACCATAG

Upstream 100 bases:

>100_bases
TAGGCAAGCCAAACATGGATATCCATTGCAATTCCTCATTCCTGACTTATGCTAGCCCAATGAGGTCAAACACTGATTCG
CACAACCCCATTGCCAACTT

Downstream 100 bases:

>100_bases
AAATTGAGGAAAAGCGCAAAGAGAGGTTTACCCTCTTTTTCCGCATTTAATTCCACTACACTAGGCAACCTAAGGGTGAC
GGCTCATCCGGCCAACCGAG

Product: lysophospholipase L2

Products: NA

Alternate protein names: Lecithinase B [H]

Number of amino acids: Translated: 338; Mature: 338

Protein sequence:

>338_residues
MNPEKNLYPYTQESSLEQALNFEIAQVWHTRSEGTYRSFDKTHIYWCSLKHPEHQKAVVIVNGRIESAWKYQELCYDLFR
QGFDVYTYDHRGQGRSERLTEDRQIGHVHEFQDYVTDLKALVEHFDLGHYQERFLLAHSMGGAIATRYIQTTPAHPFSAL
ALSAPMFGVNMPWYLRPWALLITQIMAAVTLKPSYAPGYGPYHAKPFHLNLLTHSETRYQLFRELYEAHPELQIGGPSHR
WVWQSLMATKQCLQLTRQIKIPMLILQAGEEAIVCNRAQIRLFKKLSRTQKRAALCRIAGARHELLFEQDAYRNQTLDHI
LRFFADSTIDHKRQHHRP

Sequences:

>Translated_338_residues
MNPEKNLYPYTQESSLEQALNFEIAQVWHTRSEGTYRSFDKTHIYWCSLKHPEHQKAVVIVNGRIESAWKYQELCYDLFR
QGFDVYTYDHRGQGRSERLTEDRQIGHVHEFQDYVTDLKALVEHFDLGHYQERFLLAHSMGGAIATRYIQTTPAHPFSAL
ALSAPMFGVNMPWYLRPWALLITQIMAAVTLKPSYAPGYGPYHAKPFHLNLLTHSETRYQLFRELYEAHPELQIGGPSHR
WVWQSLMATKQCLQLTRQIKIPMLILQAGEEAIVCNRAQIRLFKKLSRTQKRAALCRIAGARHELLFEQDAYRNQTLDHI
LRFFADSTIDHKRQHHRP
>Mature_338_residues
MNPEKNLYPYTQESSLEQALNFEIAQVWHTRSEGTYRSFDKTHIYWCSLKHPEHQKAVVIVNGRIESAWKYQELCYDLFR
QGFDVYTYDHRGQGRSERLTEDRQIGHVHEFQDYVTDLKALVEHFDLGHYQERFLLAHSMGGAIATRYIQTTPAHPFSAL
ALSAPMFGVNMPWYLRPWALLITQIMAAVTLKPSYAPGYGPYHAKPFHLNLLTHSETRYQLFRELYEAHPELQIGGPSHR
WVWQSLMATKQCLQLTRQIKIPMLILQAGEEAIVCNRAQIRLFKKLSRTQKRAALCRIAGARHELLFEQDAYRNQTLDHI
LRFFADSTIDHKRQHHRP

Specific function: Unknown

COG id: COG2267

COG function: function code I; Lysophospholipase

Gene ontology:

Cell location: Cell inner membrane [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI48994980, Length=322, Percent_Identity=39.1304347826087, Blast_Score=213, Evalue=2e-56,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000073 [H]

Pfam domain/function: PF00561 Abhydrolase_1 [H]

EC number: =3.1.1.5 [H]

Molecular weight: Translated: 39632; Mature: 39632

Theoretical pI: Translated: 9.00; Mature: 9.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPEKNLYPYTQESSLEQALNFEIAQVWHTRSEGTYRSFDKTHIYWCSLKHPEHQKAVVI
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCEEEE
VNGRIESAWKYQELCYDLFRQGFDVYTYDHRGQGRSERLTEDRQIGHVHEFQDYVTDLKA
EECCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHCCHHHHCCHHHHHHHHHHHHHH
LVEHFDLGHYQERFLLAHSMGGAIATRYIQTTPAHPFSALALSAPMFGVNMPWYLRPWAL
HHHHHCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHCCHHCCCCCHHHHHHHH
LITQIMAAVTLKPSYAPGYGPYHAKPFHLNLLTHSETRYQLFRELYEAHPELQIGGPSHR
HHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHCCCCEEECCCCHH
WVWQSLMATKQCLQLTRQIKIPMLILQAGEEAIVCNRAQIRLFKKLSRTQKRAALCRIAG
HHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHC
ARHELLFEQDAYRNQTLDHILRFFADSTIDHKRQHHRP
CHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCC
>Mature Secondary Structure
MNPEKNLYPYTQESSLEQALNFEIAQVWHTRSEGTYRSFDKTHIYWCSLKHPEHQKAVVI
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCEEEE
VNGRIESAWKYQELCYDLFRQGFDVYTYDHRGQGRSERLTEDRQIGHVHEFQDYVTDLKA
EECCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHCCHHHHCCHHHHHHHHHHHHHH
LVEHFDLGHYQERFLLAHSMGGAIATRYIQTTPAHPFSALALSAPMFGVNMPWYLRPWAL
HHHHHCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHCCHHCCCCCHHHHHHHH
LITQIMAAVTLKPSYAPGYGPYHAKPFHLNLLTHSETRYQLFRELYEAHPELQIGGPSHR
HHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHCCCCEEECCCCHH
WVWQSLMATKQCLQLTRQIKIPMLILQAGEEAIVCNRAQIRLFKKLSRTQKRAALCRIAG
HHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHC
ARHELLFEQDAYRNQTLDHILRFFADSTIDHKRQHHRP
CHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]