Click here to switch to the map view.

The map label for this gene is 227080343

Identifier: 227080343

GI number: 227080343

Start: 102873

End: 103010

Strand: Reverse

Name: 227080343

Synonym: VCM66_0107

Alternate gene names: NA

Gene position: 103010-102873 (Counterclockwise)

Preceding gene: 227080345

Following gene: 227080340

Centisome position: 3.56

GC content: 36.23

Gene sequence:

>138_bases
TTGGATTCCATGTTGTTACCGTTTTTGGCTCATTCAGGGGATATCCGACCCACTTATCCAACCCTACATTCTGTGGATAA
CTCTGTTTATAGATTTATTTATGTCGATTTACAACCGATAAATTTACTGCATGATTAA

Upstream 100 bases:

>100_bases
AGAGGAGCCGTCGATCAAAATCAATGGATTGTCAGGTATATGAGCCATAGAAGGATTATCCAAACGTAAGTAAATGAGCC
TAGGATGCCACGACTAATGC

Downstream 100 bases:

>100_bases
TTTTTAAGTTAATGTTTTTAAACAATAAAAAAAAGGATCGACTGAAAATAAAATGATCTTTTGCGGATCGTAAATTGTGG
AAAAGACACTCGCTGCCCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 45; Mature: 45

Protein sequence:

>45_residues
MDSMLLPFLAHSGDIRPTYPTLHSVDNSVYRFIYVDLQPINLLHD

Sequences:

>Translated_45_residues
MDSMLLPFLAHSGDIRPTYPTLHSVDNSVYRFIYVDLQPINLLHD
>Mature_45_residues
MDSMLLPFLAHSGDIRPTYPTLHSVDNSVYRFIYVDLQPINLLHD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 5216; Mature: 5216

Theoretical pI: Translated: 5.34; Mature: 5.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSMLLPFLAHSGDIRPTYPTLHSVDNSVYRFIYVDLQPINLLHD
CCCCCCCHHCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCC
>Mature Secondary Structure
MDSMLLPFLAHSGDIRPTYPTLHSVDNSVYRFIYVDLQPINLLHD
CCCCCCCHHCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA