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The map label for this gene is trkA [H]

Identifier: 227080280

GI number: 227080280

Start: 40559

End: 41935

Strand: Reverse

Name: trkA [H]

Synonym: VCM66_0043

Alternate gene names: 227080280

Gene position: 41935-40559 (Counterclockwise)

Preceding gene: 227080281

Following gene: 227080279

Centisome position: 1.45

GC content: 52.21

Gene sequence:

>1377_bases
ATGAAAATCATCATTCTTGGTGCAGGACAAGTCGGCGGTACGCTCGCTGAAAACTTGGTAGGCGAAAACAACGACATTAC
TGTGGTCGATAAAAACGCTGACCGACTGCGCGATTTACAAGATAAATATGATTTGCGTGTAGTCAATGGTCACGCCAGCC
ACCCTGATGTGCTGCGCGAAGCTGGCGCACAAGATGCTGACATGCTGGTCGCGGTCACCAATACCGATGAAACCAACATG
GCCGCTTGTCAGGTCGCCTTTACTCTGTTTAACACGCCCAACCGGATTGCGCGTATCCGCTCTCCACAATATCTCGCTGA
AAAAGAAGCGCTGTTTCAATCTGGCGCGGTCCCGGTCGATCACCTGATTGCACCGGAAGAACTGGTCACCAGCTATATCG
AGCGCTTGATCCAGTATCCGGGCGCGCTGCAAGTGGTGAGTTTCGCCGAAGAAAAAGTCAGCTTGGTGGCCGTTAAAGCG
TATTACGGTGGTCCACTGGTTGGTAACGCCCTTTCTGCCCTACGCGATCACATGCCGCACATCGATACTCGCGTGGCAGC
GATTTTCCGTCAGGGACGCCCAATTCGTCCGCAAGGCACCACCATTATTGAAGCGGATGATGAAGTGTTTTTCGTCGCCG
CGAGTAACCATATTCGCTCGGTGATGAGTGAGTTGCAGCGCCTTGAAAAACCGTATCGTCGGATCATGATTGTCGGCGGC
GGTAACATAGGTGCCAGCCTCGCTAAACGCCTAGAGCAAACTTACAGCGTTAAGCTGATTGAACATAATTACCAACGTGC
GGAACAGTTATCTGAACAGTTGGAAAATACCATCGTCTTTTGTGGAGATGCCGCGGACCAAGAGCTGCTGTCGGAAGAGA
ATATCGATCAGGTCGATGTGTTTATCGCCCTCACCAATGAAGATGAAACCAACATCATGTCGGCCATGCTTGCCAAACGC
ATGGGAGCCAAGAAAGCCATGGTGCTTATCCAACGCAGCGGCTATGTCGATTTAGTCCAAGGCGGTGTGATTGATGTAGC
GATCTCCCCGCAGCAAGCGACCATTTCTGCGCTACTCACTCACGTGCGCCGCGCCGATATTGTCAACGTCTCTTCATTAC
GCCGTGGAGCGGCAGAAGCCATTGAAGCGATTGCCCACGGCGATGAATCAACCTCTAAGGTAGTAGGACGAGCGGTGGGC
GATATTAAACTGCCTCCGGGCACGACAATTGGCGCTATTGTGCGGGGCGAAGAAGTGCTGATTGCCCATGACCGCACTGT
CATCGAGCAAGACGATCACGTCGTCATGTTCTTGGTCGATAAAAAATATGTGCCCGACGTGGAAACGCTATTCCAGCCGA
GCCCATTCTTCTTGTAA

Upstream 100 bases:

>100_bases
GACGGTTTCTATTACGCCGTATTAAGCAAACAACACTGATTCGGTCAACCAAGGTGAGCCACAACTCACCTTGGGCGTGA
GCAAACAAAGAGAACAAGTT

Downstream 100 bases:

>100_bases
AGGTTGGCGCTATGCTCAACTTACGCCCAATTACGTTTATCATCGGGCTAGTGCTGTCTAAGCTAGCCCTATTCATGTAC
GTGCCGACTCTAGTGGCATT

Product: potassium transporter peripheral membrane component

Products: NA

Alternate protein names: K(+)-uptake protein trkA [H]

Number of amino acids: Translated: 458; Mature: 458

Protein sequence:

>458_residues
MKIIILGAGQVGGTLAENLVGENNDITVVDKNADRLRDLQDKYDLRVVNGHASHPDVLREAGAQDADMLVAVTNTDETNM
AACQVAFTLFNTPNRIARIRSPQYLAEKEALFQSGAVPVDHLIAPEELVTSYIERLIQYPGALQVVSFAEEKVSLVAVKA
YYGGPLVGNALSALRDHMPHIDTRVAAIFRQGRPIRPQGTTIIEADDEVFFVAASNHIRSVMSELQRLEKPYRRIMIVGG
GNIGASLAKRLEQTYSVKLIEHNYQRAEQLSEQLENTIVFCGDAADQELLSEENIDQVDVFIALTNEDETNIMSAMLAKR
MGAKKAMVLIQRSGYVDLVQGGVIDVAISPQQATISALLTHVRRADIVNVSSLRRGAAEAIEAIAHGDESTSKVVGRAVG
DIKLPPGTTIGAIVRGEEVLIAHDRTVIEQDDHVVMFLVDKKYVPDVETLFQPSPFFL

Sequences:

>Translated_458_residues
MKIIILGAGQVGGTLAENLVGENNDITVVDKNADRLRDLQDKYDLRVVNGHASHPDVLREAGAQDADMLVAVTNTDETNM
AACQVAFTLFNTPNRIARIRSPQYLAEKEALFQSGAVPVDHLIAPEELVTSYIERLIQYPGALQVVSFAEEKVSLVAVKA
YYGGPLVGNALSALRDHMPHIDTRVAAIFRQGRPIRPQGTTIIEADDEVFFVAASNHIRSVMSELQRLEKPYRRIMIVGG
GNIGASLAKRLEQTYSVKLIEHNYQRAEQLSEQLENTIVFCGDAADQELLSEENIDQVDVFIALTNEDETNIMSAMLAKR
MGAKKAMVLIQRSGYVDLVQGGVIDVAISPQQATISALLTHVRRADIVNVSSLRRGAAEAIEAIAHGDESTSKVVGRAVG
DIKLPPGTTIGAIVRGEEVLIAHDRTVIEQDDHVVMFLVDKKYVPDVETLFQPSPFFL
>Mature_458_residues
MKIIILGAGQVGGTLAENLVGENNDITVVDKNADRLRDLQDKYDLRVVNGHASHPDVLREAGAQDADMLVAVTNTDETNM
AACQVAFTLFNTPNRIARIRSPQYLAEKEALFQSGAVPVDHLIAPEELVTSYIERLIQYPGALQVVSFAEEKVSLVAVKA
YYGGPLVGNALSALRDHMPHIDTRVAAIFRQGRPIRPQGTTIIEADDEVFFVAASNHIRSVMSELQRLEKPYRRIMIVGG
GNIGASLAKRLEQTYSVKLIEHNYQRAEQLSEQLENTIVFCGDAADQELLSEENIDQVDVFIALTNEDETNIMSAMLAKR
MGAKKAMVLIQRSGYVDLVQGGVIDVAISPQQATISALLTHVRRADIVNVSSLRRGAAEAIEAIAHGDESTSKVVGRAVG
DIKLPPGTTIGAIVRGEEVLIAHDRTVIEQDDHVVMFLVDKKYVPDVETLFQPSPFFL

Specific function: Part of a potassium transport system [H]

COG id: COG0569

COG function: function code P; K+ transport systems, NAD-binding component

Gene ontology:

Cell location: Peripherally Bound To The Inner Side Of The Inner Membrane Via The Trkg And Trkh Proteins [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 RCK N-terminal domains [H]

Homologues:

Organism=Escherichia coli, GI1789685, Length=458, Percent_Identity=78.6026200873362, Blast_Score=750, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006036
- InterPro:   IPR016040
- InterPro:   IPR006037
- InterPro:   IPR003148 [H]

Pfam domain/function: PF02080 TrkA_C; PF02254 TrkA_N [H]

EC number: NA

Molecular weight: Translated: 50113; Mature: 50113

Theoretical pI: Translated: 4.89; Mature: 4.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIIILGAGQVGGTLAENLVGENNDITVVDKNADRLRDLQDKYDLRVVNGHASHPDVLRE
CEEEEEECCCCCHHHHHHHCCCCCCEEEEECCHHHHHHHHHHCCEEEEECCCCCHHHHHH
AGAQDADMLVAVTNTDETNMAACQVAFTLFNTPNRIARIRSPQYLAEKEALFQSGAVPVD
CCCCCCCEEEEEECCCCCCHHHHHEEHHHHCCCHHHHHCCCCHHHHHHHHHHHCCCCCHH
HLIAPEELVTSYIERLIQYPGALQVVSFAEEKVSLVAVKAYYGGPLVGNALSALRDHMPH
HCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCEEEEEEEECCCCCHHHHHHHHHHHCCCC
IDTRVAAIFRQGRPIRPQGTTIIEADDEVFFVAASNHIRSVMSELQRLEKPYRRIMIVGG
HHHHHHHHHHCCCCCCCCCCEEEECCCCEEEEECCHHHHHHHHHHHHHHHHHHEEEEEEC
GNIGASLAKRLEQTYSVKLIEHNYQRAEQLSEQLENTIVFCGDAADQELLSEENIDQVDV
CCHHHHHHHHHHHHHEEEEEHHHHHHHHHHHHHHHCEEEEECCCCCHHHHHHCCCCEEEE
FIALTNEDETNIMSAMLAKRMGAKKAMVLIQRSGYVDLVQGGVIDVAISPQQATISALLT
EEEEECCCHHHHHHHHHHHHHCCCEEEEEEECCCCEEEECCCEEEEEECCCHHHHHHHHH
HVRRADIVNVSSLRRGAAEAIEAIAHGDESTSKVVGRAVGDIKLPPGTTIGAIVRGEEVL
HHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCEECCCCCCEEEEEECCEEE
IAHDRTVIEQDDHVVMFLVDKKYVPDVETLFQPSPFFL
EEECCEEEECCCCEEEEEECCCCCCCHHHHCCCCCCCC
>Mature Secondary Structure
MKIIILGAGQVGGTLAENLVGENNDITVVDKNADRLRDLQDKYDLRVVNGHASHPDVLRE
CEEEEEECCCCCHHHHHHHCCCCCCEEEEECCHHHHHHHHHHCCEEEEECCCCCHHHHHH
AGAQDADMLVAVTNTDETNMAACQVAFTLFNTPNRIARIRSPQYLAEKEALFQSGAVPVD
CCCCCCCEEEEEECCCCCCHHHHHEEHHHHCCCHHHHHCCCCHHHHHHHHHHHCCCCCHH
HLIAPEELVTSYIERLIQYPGALQVVSFAEEKVSLVAVKAYYGGPLVGNALSALRDHMPH
HCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCEEEEEEEECCCCCHHHHHHHHHHHCCCC
IDTRVAAIFRQGRPIRPQGTTIIEADDEVFFVAASNHIRSVMSELQRLEKPYRRIMIVGG
HHHHHHHHHHCCCCCCCCCCEEEECCCCEEEEECCHHHHHHHHHHHHHHHHHHEEEEEEC
GNIGASLAKRLEQTYSVKLIEHNYQRAEQLSEQLENTIVFCGDAADQELLSEENIDQVDV
CCHHHHHHHHHHHHHEEEEEHHHHHHHHHHHHHHHCEEEEECCCCCHHHHHHCCCCEEEE
FIALTNEDETNIMSAMLAKRMGAKKAMVLIQRSGYVDLVQGGVIDVAISPQQATISALLT
EEEEECCCHHHHHHHHHHHHHCCCEEEEEEECCCCEEEECCCEEEEEECCCHHHHHHHHH
HVRRADIVNVSSLRRGAAEAIEAIAHGDESTSKVVGRAVGDIKLPPGTTIGAIVRGEEVL
HHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCEECCCCCCEEEEEECCEEE
IAHDRTVIEQDDHVVMFLVDKKYVPDVETLFQPSPFFL
EEECCEEEECCCCEEEEEECCCCCCCHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7948029; 9720051 [H]