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The map label for this gene is yybT [H]

Identifier: 226951075

GI number: 226951075

Start: 4134898

End: 4136883

Strand: Reverse

Name: yybT [H]

Synonym: CLM_4128

Alternate gene names: 226951075

Gene position: 4136883-4134898 (Counterclockwise)

Preceding gene: 226951076

Following gene: 226951074

Centisome position: 99.56

GC content: 25.88

Gene sequence:

>1986_bases
ATGAGTGATAATAGGTACGATAATTTTATTACAAATAATAAAGTATATATGTTTATTATAGCCATACTAATAGTTATTAT
CTTTTCATACAAACATTCACAAGTAGGTATAGTATTAACACTTATATATTTTTTCTTGTTACTTTATAATTTTAAGAATA
CAAGAATTAAGAAAAAAGAGCTAAAAAAATTTATAGAGGATTTTTCTACAAAAATGGATAGTGCATTTAAAAGTTCTCTA
ATGAATTTACCTTTTCCTATGATGGTTTTATCTAATAAGGGAGAGGTTTTATGGTATAATCAAAATTTCTCACTATTATT
AAAAAAAGATGGAATATTAGGAGAAAACATAAATCATATATTAAAAAATTTTAATTTTAAATATGCTCTAGAAGGAAAAA
AGAATTCCTTCAAAAATATTAATTTTAAGGATAATTATTATAATATATATACTAACACATTTTTTGATGAGGAAATCAGA
GAAAAAATATTACTTCTTTATTTTTATGATGTTACAGATATGTTTAATATATTGATGAATATGGAAAAAAATAAAGAAGG
AATAATGCTTTTGGAAGTGGATAACTTAGATGAGGTATTAAAAAGTATAGATATAGATAAAAAACCATTAATAATAGCAG
AAATAGAAAGACATATAAATAGTTTTTCTGAAGACATGAAAGCTATGATAAAAAAATATGAGCAAAATAAATATATATTA
TCTGTCCAAAATTCTTATATAGAAAAACAAATGGAGAAAAAATTTGATATACTAGATATAATAAGGAATATAGATACAGG
AAATAAGATGAATCCTACTTTAAGCATAGGAGTAGGAAAGGGAGCAGAAACCCCTTTACAAAATTATAGTTATGCACTTG
CAGCTAAAGAATTAGCATTAGGTAGAGGGGGAGACCAGTCTGTAGTAAAAAATAAGGATAAACTCTCATTTTATGGTGGA
AAAACTAAAGAAGTTGAAAAACGAACAAAGGTTAGGGCAAGGGTTATAGGTCATGCTTTAGTTAATTTAATAAATGAAAG
TAGTAATATAATTATAATGGGGCATATAAATGCAGACATAGATTGTCTAGGTTCAGCTATAGGACTTCACAGTATAATAA
ATCAATTGGATAAAAAAAGTTATATAATTCTGGAGAATTATAATAAAAGTAGTGAATTTTTATTAGATAAGATAAAAAAA
GAAAAGGGATATGAGAATACATTTATAAATAGTAAAGAAGCTTTAGATGTTATGAATGAAGAGAGCTTATTAATAATAGT
AGATTCTCATAGTAGAGGTTATGTTCAAAATATTAGCTTAGTTGATAAATTTAGTAAAATAGTTATAATAGATCATCATA
GAAGAGCAACGGACTATATAGAAAGATCTATATTAAGTTATATAGAACCTTACGCTTCTTCTACAGCAGAATTAGTAACA
GAAATGATTCAATATATGGTAGAAAAACCTAATATTTCTCCAATCATAGCAGAAGCTCTTTTAGCAGGAATATATGTGGA
TACAAAAAATTTTTACTTCAAAACAGGTGTTAGAACATTTGAAGCCGCATCTTTTTTAAAAAAATTTGGAGCAGATACTA
TTGATGTTAAGAAGTTTTTTGCTAGTGATTTAGATGATTATATCAAAAAGTTAGAAATAATAAAATCAGTCCATGTAAAA
AATGATATTGCTATAGCAGTATGTCCAGAAAATATAGAAGATAATGTATTAGCTGCCCAGGCAGCGGACGAACTACTAAA
TATTTCAGGTATTCAAGCTTCCTTTGTATTTGTTACAATAGATAATGAAATATATATAAGTGGAAGATCCCTTGGAGATA
TTAACGTTCAATTAATACTTGAAATGCTAGGTGGTGGAGGACATATGACTATGGCTGGAGCTAAATTAGAAAAAATTAAT
TTAAAAGAGGCAGTAGAAAAATTAGAATTAGCCATAGATAAATATTTAAGGGAAGGTGAAGAATAA

Upstream 100 bases:

>100_bases
TATTATTTATTTTTATTTAGGGTTAGCGGATATAATGCTTGATTTCAGAAAATTAGATCCCTTTAGACAATATAAGAATA
ATAAAAGTGGGGAATTATAA

Downstream 100 bases:

>100_bases
TGAAAGTTATATTATTAAAAGACGTTAAATCATTGGGTAAGAAGGGGGATCTAGTTAATGCATCTGATGGGTATGCAAGA
AATTATCTAATCCCAAAGAA

Product: DHH family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 661; Mature: 660

Protein sequence:

>661_residues
MSDNRYDNFITNNKVYMFIIAILIVIIFSYKHSQVGIVLTLIYFFLLLYNFKNTRIKKKELKKFIEDFSTKMDSAFKSSL
MNLPFPMMVLSNKGEVLWYNQNFSLLLKKDGILGENINHILKNFNFKYALEGKKNSFKNINFKDNYYNIYTNTFFDEEIR
EKILLLYFYDVTDMFNILMNMEKNKEGIMLLEVDNLDEVLKSIDIDKKPLIIAEIERHINSFSEDMKAMIKKYEQNKYIL
SVQNSYIEKQMEKKFDILDIIRNIDTGNKMNPTLSIGVGKGAETPLQNYSYALAAKELALGRGGDQSVVKNKDKLSFYGG
KTKEVEKRTKVRARVIGHALVNLINESSNIIIMGHINADIDCLGSAIGLHSIINQLDKKSYIILENYNKSSEFLLDKIKK
EKGYENTFINSKEALDVMNEESLLIIVDSHSRGYVQNISLVDKFSKIVIIDHHRRATDYIERSILSYIEPYASSTAELVT
EMIQYMVEKPNISPIIAEALLAGIYVDTKNFYFKTGVRTFEAASFLKKFGADTIDVKKFFASDLDDYIKKLEIIKSVHVK
NDIAIAVCPENIEDNVLAAQAADELLNISGIQASFVFVTIDNEIYISGRSLGDINVQLILEMLGGGGHMTMAGAKLEKIN
LKEAVEKLELAIDKYLREGEE

Sequences:

>Translated_661_residues
MSDNRYDNFITNNKVYMFIIAILIVIIFSYKHSQVGIVLTLIYFFLLLYNFKNTRIKKKELKKFIEDFSTKMDSAFKSSL
MNLPFPMMVLSNKGEVLWYNQNFSLLLKKDGILGENINHILKNFNFKYALEGKKNSFKNINFKDNYYNIYTNTFFDEEIR
EKILLLYFYDVTDMFNILMNMEKNKEGIMLLEVDNLDEVLKSIDIDKKPLIIAEIERHINSFSEDMKAMIKKYEQNKYIL
SVQNSYIEKQMEKKFDILDIIRNIDTGNKMNPTLSIGVGKGAETPLQNYSYALAAKELALGRGGDQSVVKNKDKLSFYGG
KTKEVEKRTKVRARVIGHALVNLINESSNIIIMGHINADIDCLGSAIGLHSIINQLDKKSYIILENYNKSSEFLLDKIKK
EKGYENTFINSKEALDVMNEESLLIIVDSHSRGYVQNISLVDKFSKIVIIDHHRRATDYIERSILSYIEPYASSTAELVT
EMIQYMVEKPNISPIIAEALLAGIYVDTKNFYFKTGVRTFEAASFLKKFGADTIDVKKFFASDLDDYIKKLEIIKSVHVK
NDIAIAVCPENIEDNVLAAQAADELLNISGIQASFVFVTIDNEIYISGRSLGDINVQLILEMLGGGGHMTMAGAKLEKIN
LKEAVEKLELAIDKYLREGEE
>Mature_660_residues
SDNRYDNFITNNKVYMFIIAILIVIIFSYKHSQVGIVLTLIYFFLLLYNFKNTRIKKKELKKFIEDFSTKMDSAFKSSLM
NLPFPMMVLSNKGEVLWYNQNFSLLLKKDGILGENINHILKNFNFKYALEGKKNSFKNINFKDNYYNIYTNTFFDEEIRE
KILLLYFYDVTDMFNILMNMEKNKEGIMLLEVDNLDEVLKSIDIDKKPLIIAEIERHINSFSEDMKAMIKKYEQNKYILS
VQNSYIEKQMEKKFDILDIIRNIDTGNKMNPTLSIGVGKGAETPLQNYSYALAAKELALGRGGDQSVVKNKDKLSFYGGK
TKEVEKRTKVRARVIGHALVNLINESSNIIIMGHINADIDCLGSAIGLHSIINQLDKKSYIILENYNKSSEFLLDKIKKE
KGYENTFINSKEALDVMNEESLLIIVDSHSRGYVQNISLVDKFSKIVIIDHHRRATDYIERSILSYIEPYASSTAELVTE
MIQYMVEKPNISPIIAEALLAGIYVDTKNFYFKTGVRTFEAASFLKKFGADTIDVKKFFASDLDDYIKKLEIIKSVHVKN
DIAIAVCPENIEDNVLAAQAADELLNISGIQASFVFVTIDNEIYISGRSLGDINVQLILEMLGGGGHMTMAGAKLEKINL
KEAVEKLELAIDKYLREGEE

Specific function: Unknown

COG id: COG3887

COG function: function code T; Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 GGDEF domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000160
- InterPro:   IPR003156
- InterPro:   IPR001667
- InterPro:   IPR014528 [H]

Pfam domain/function: PF01368 DHH; PF02272 DHHA1 [H]

EC number: NA

Molecular weight: Translated: 75634; Mature: 75502

Theoretical pI: Translated: 6.47; Mature: 6.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDNRYDNFITNNKVYMFIIAILIVIIFSYKHSQVGIVLTLIYFFLLLYNFKNTRIKKKE
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHH
LKKFIEDFSTKMDSAFKSSLMNLPFPMMVLSNKGEVLWYNQNFSLLLKKDGILGENINHI
HHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEECCCCEEEEEECCCCCCCHHHH
LKNFNFKYALEGKKNSFKNINFKDNYYNIYTNTFFDEEIREKILLLYFYDVTDMFNILMN
HHCCCCEEEECCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHEEEEEEHHHHHHHHHHHC
MEKNKEGIMLLEVDNLDEVLKSIDIDKKPLIIAEIERHINSFSEDMKAMIKKYEQNKYIL
CCCCCCCEEEEEECCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE
SVQNSYIEKQMEKKFDILDIIRNIDTGNKMNPTLSIGVGKGAETPLQNYSYALAAKELAL
EEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCHHCCHHHHHHHHHHH
GRGGDQSVVKNKDKLSFYGGKTKEVEKRTKVRARVIGHALVNLINESSNIIIMGHINADI
CCCCCHHHHCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCH
DCLGSAIGLHSIINQLDKKSYIILENYNKSSEFLLDKIKKEKGYENTFINSKEALDVMNE
HHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCC
ESLLIIVDSHSRGYVQNISLVDKFSKIVIIDHHRRATDYIERSILSYIEPYASSTAELVT
CCEEEEEECCCCCCCHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCHHHHHH
EMIQYMVEKPNISPIIAEALLAGIYVDTKNFYFKTGVRTFEAASFLKKFGADTIDVKKFF
HHHHHHHCCCCCCHHHHHHHHHHEEEECCCEEEECCCHHHHHHHHHHHHCCCHHHHHHHH
ASDLDDYIKKLEIIKSVHVKNDIAIAVCPENIEDNVLAAQAADELLNISGIQASFVFVTI
HHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCCEEEEEEEEE
DNEIYISGRSLGDINVQLILEMLGGGGHMTMAGAKLEKINLKEAVEKLELAIDKYLREGE
CCEEEEECCCCCCCHHHHHHHHHCCCCEEEEECCCHHCCCHHHHHHHHHHHHHHHHHCCC
E
C
>Mature Secondary Structure 
SDNRYDNFITNNKVYMFIIAILIVIIFSYKHSQVGIVLTLIYFFLLLYNFKNTRIKKKE
CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHH
LKKFIEDFSTKMDSAFKSSLMNLPFPMMVLSNKGEVLWYNQNFSLLLKKDGILGENINHI
HHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEECCCCEEEEEECCCCCCCHHHH
LKNFNFKYALEGKKNSFKNINFKDNYYNIYTNTFFDEEIREKILLLYFYDVTDMFNILMN
HHCCCCEEEECCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHEEEEEEHHHHHHHHHHHC
MEKNKEGIMLLEVDNLDEVLKSIDIDKKPLIIAEIERHINSFSEDMKAMIKKYEQNKYIL
CCCCCCCEEEEEECCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE
SVQNSYIEKQMEKKFDILDIIRNIDTGNKMNPTLSIGVGKGAETPLQNYSYALAAKELAL
EEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCHHCCHHHHHHHHHHH
GRGGDQSVVKNKDKLSFYGGKTKEVEKRTKVRARVIGHALVNLINESSNIIIMGHINADI
CCCCCHHHHCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCH
DCLGSAIGLHSIINQLDKKSYIILENYNKSSEFLLDKIKKEKGYENTFINSKEALDVMNE
HHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCC
ESLLIIVDSHSRGYVQNISLVDKFSKIVIIDHHRRATDYIERSILSYIEPYASSTAELVT
CCEEEEEECCCCCCCHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCHHHHHH
EMIQYMVEKPNISPIIAEALLAGIYVDTKNFYFKTGVRTFEAASFLKKFGADTIDVKKFF
HHHHHHHCCCCCCHHHHHHHHHHEEEECCCEEEECCCHHHHHHHHHHHHCCCHHHHHHHH
ASDLDDYIKKLEIIKSVHVKNDIAIAVCPENIEDNVLAAQAADELLNISGIQASFVFVTI
HHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCCEEEEEEEEE
DNEIYISGRSLGDINVQLILEMLGGGGHMTMAGAKLEKINLKEAVEKLELAIDKYLREGE
CCEEEEECCCCCCCHHHHHHHHHCCCCEEEEECCCHHCCCHHHHHHHHHHHHHHHHHCCC
E
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]