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The map label for this gene is 226950889

Identifier: 226950889

GI number: 226950889

Start: 3945392

End: 3946132

Strand: Reverse

Name: 226950889

Synonym: CLM_3904

Alternate gene names: NA

Gene position: 3946132-3945392 (Counterclockwise)

Preceding gene: 226950890

Following gene: 226950888

Centisome position: 94.97

GC content: 24.83

Gene sequence:

>741_bases
ATGTTAAAAAATAAGAAGATAGCACTAATACTAATTACCTTAATAATTTTTAGTTTTTCAATAGGATGTACTAAGGAGAA
TAAGTCATCAGTTGAAAATACTAAGCAAGAAGAACAAAAGGTAGAATCTAATAATAATGATAAAGAAGAGAAAGATAAGA
AGAATAATACTGAAGCTAAAAATAAAGAAAAGAAGGATGAAAAAGAAGTTTCAGAAAAAACAAATTTTTCTAAAGTAGAA
AAAGAAGAGATAGTAGATAAAAAGTTCCAAGGGGAAAATAATACTGAATGGAAAGAAAGTGAGCAAAAAAAATACTCAGC
TATTGTAGAAGGCAAAGGAAATAATGGAGAAGAGGAAGGAATAGGTAAAGTTTATTTAAAAGAAAACAATACTAATAAAT
TATGGTTGTTAAAAATCAATGAAATAAAAGATCAAAAAAGCCCTAAATTTTTATATTGGATAGATGATGAAAACTTATTA
GTTATTATTGGCCATGGCTATGGAACAGTTTCTAAAGGTGGAAATTTATATTGTATAAATGTAAAAAATGATACTATTAC
TCCAGTATACGAAGCAAAAGATAATAAACATGAAGTAATATCTGCAGAAAAGGTAAAGGATAATTCAGGGAAAACAAGCT
TAATCTTAACATTAAATGTATATGAAGATGACAATTTTATTAAATCACATAAAGAAAAAATCACTATTTCTAATGATAAA
GTAAAAGAATTTATTAAATAA

Upstream 100 bases:

>100_bases
AAGCTTCATGTTAACTTTATGTTTTCATGGAGTTTTTTTTTACACAATTGATATTTTTAGATATAATTAGATATATATCT
ATATTTTTGGAGGGGATAAT

Downstream 100 bases:

>100_bases
GAACTATAGCTAAGAGAGGAAATTCAGATGAATAATGAAGCTAAATCTAGAAAAATATATACTAAGGCTTTAGACAATTT
TAATAATGGAAATATAGATA

Product: putative lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 246; Mature: 246

Protein sequence:

>246_residues
MLKNKKIALILITLIIFSFSIGCTKENKSSVENTKQEEQKVESNNNDKEEKDKKNNTEAKNKEKKDEKEVSEKTNFSKVE
KEEIVDKKFQGENNTEWKESEQKKYSAIVEGKGNNGEEEGIGKVYLKENNTNKLWLLKINEIKDQKSPKFLYWIDDENLL
VIIGHGYGTVSKGGNLYCINVKNDTITPVYEAKDNKHEVISAEKVKDNSGKTSLILTLNVYEDDNFIKSHKEKITISNDK
VKEFIK

Sequences:

>Translated_246_residues
MLKNKKIALILITLIIFSFSIGCTKENKSSVENTKQEEQKVESNNNDKEEKDKKNNTEAKNKEKKDEKEVSEKTNFSKVE
KEEIVDKKFQGENNTEWKESEQKKYSAIVEGKGNNGEEEGIGKVYLKENNTNKLWLLKINEIKDQKSPKFLYWIDDENLL
VIIGHGYGTVSKGGNLYCINVKNDTITPVYEAKDNKHEVISAEKVKDNSGKTSLILTLNVYEDDNFIKSHKEKITISNDK
VKEFIK
>Mature_246_residues
MLKNKKIALILITLIIFSFSIGCTKENKSSVENTKQEEQKVESNNNDKEEKDKKNNTEAKNKEKKDEKEVSEKTNFSKVE
KEEIVDKKFQGENNTEWKESEQKKYSAIVEGKGNNGEEEGIGKVYLKENNTNKLWLLKINEIKDQKSPKFLYWIDDENLL
VIIGHGYGTVSKGGNLYCINVKNDTITPVYEAKDNKHEVISAEKVKDNSGKTSLILTLNVYEDDNFIKSHKEKITISNDK
VKEFIK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28288; Mature: 28288

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKNKKIALILITLIIFSFSIGCTKENKSSVENTKQEEQKVESNNNDKEEKDKKNNTEAK
CCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCHH
NKEKKDEKEVSEKTNFSKVEKEEIVDKKFQGENNTEWKESEQKKYSAIVEGKGNNGEEEG
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHEEEEEECCCCCCCCCC
IGKVYLKENNTNKLWLLKINEIKDQKSPKFLYWIDDENLLVIIGHGYGTVSKGGNLYCIN
CEEEEEEECCCCEEEEEEEECCCCCCCCCEEEEECCCCEEEEEECCCCCCCCCCCEEEEE
VKNDTITPVYEAKDNKHEVISAEKVKDNSGKTSLILTLNVYEDDNFIKSHKEKITISNDK
ECCCCCCEEEECCCCCCCEEEHHHCCCCCCCEEEEEEEEEECCCCHHHCCCCEEEECCHH
VKEFIK
HHHHCC
>Mature Secondary Structure
MLKNKKIALILITLIIFSFSIGCTKENKSSVENTKQEEQKVESNNNDKEEKDKKNNTEAK
CCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCHH
NKEKKDEKEVSEKTNFSKVEKEEIVDKKFQGENNTEWKESEQKKYSAIVEGKGNNGEEEG
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHEEEEEECCCCCCCCCC
IGKVYLKENNTNKLWLLKINEIKDQKSPKFLYWIDDENLLVIIGHGYGTVSKGGNLYCIN
CEEEEEEECCCCEEEEEEEECCCCCCCCCEEEEECCCCEEEEEECCCCCCCCCCCEEEEE
VKNDTITPVYEAKDNKHEVISAEKVKDNSGKTSLILTLNVYEDDNFIKSHKEKITISNDK
ECCCCCCEEEECCCCCCCEEEHHHCCCCCCCEEEEEEEEEECCCCHHHCCCCEEEECCHH
VKEFIK
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA