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The map label for this gene is iadA [H]

Identifier: 226950887

GI number: 226950887

Start: 3942861

End: 3944036

Strand: Reverse

Name: iadA [H]

Synonym: CLM_3902

Alternate gene names: 226950887

Gene position: 3944036-3942861 (Counterclockwise)

Preceding gene: 226950888

Following gene: 226950886

Centisome position: 94.92

GC content: 31.38

Gene sequence:

>1176_bases
ATGATAACAATTATAAAAAATGGATATGTATATTCCCCTAAATTTTTAGGAAAAAAAGACATTTTAATAGCTTCTAGTAA
TATAGAAGGGGTATATGATAGTTTAGATATACCAAAGGAATTCGGTGAAATAAAGGTTATAGATGCTAAGGAAAATATAG
TTACACCAGGATTTATAGATTCCCATGTTCATTTAATAGGTGGTGGTGGTGAAGGTGGATTTAGCACTACAACACCTGAA
ATACAATTATCACATATAATAAGTTCTGGTATAACTACCGTAGTAGGGTGCTTAGGAACAGATGGTATATGTAGAAGTAT
GGAAGCTCTGTTAGCTAAAGCCAAAGGATTAGAAGAAGATGGCATAACCACATACATATACACTGGATCATATAGCATAC
CAGTTAATAATATCACAGGCTGTTCAAAGTCTGATATTATGCTAATAGATAAAGTTATAGGTGTAGGAGAAATAGCTTTG
TCAGATCATAGATCTTCCCAACCTAGTTATGAGGATTTTGTAAAAATTTGCGCAGAGGGAAGAGTAGGCGGATTATTAGC
TAATAAGGCTGGAGTTATTCATGTTCACATTGGTAGTGGTAAAAAAGGAATAGATTATTTGTTTAAAGTAATAAAAGATA
CAGAAATACCTGCATCTCAAATTATACCTACTCATATGGGAAGAAGTGAAGATTTATTTAACCAAGGGATACAATATATG
AAAAAAGGTGGAGTTATAGATTTAACAACAAGCTCTGATCCTGATTTTTTAGAAGAAGGAGAAATAAAGGCTAGTTCAGG
ACTTAAAAGAATATTAGATAGTGGTTTAGATATAGAAAGAGTTCATTTTTCTTCAGATGGACAGGGAAGCTTGCCCAGAT
TTAACGAAAAAAGAGAATATGTAGGTTTAGGTATAGGTTCAGTACACTCATTATATAGGGAATTTAAGGATTGTGTTGTA
AAAGAAAAAATAAAAATAGAAGATGCACTAAAAGTAGTTACATCAAATGTAGCAGATTATTTGATGCTAAATAATAAAGG
ACATATAGAAAAAGAAAAGGATGCAGATATAGTAATATTAGATAAGGAGAATTTAGAGATACTACATGTTATTTGTAAAG
GTAAACACTTAGTTGAAGATGGTAAAGTGTTAAAGAAAGGCACATTTGAAGGATAA

Upstream 100 bases:

>100_bases
TAAAGAGAATTATAAATAACAATTAATATTTTAGAATATTTTATTTATAATGTAAAACAATAATATTAGTTCTAATTTTG
TTTTACAGGAGAGAATAAAG

Downstream 100 bases:

>100_bases
ATAATAAATTTTTATAATACATTTTAAAACTATTGACTAATATATTTGTATATATTAGAATATAAGTAAATGCATACCCT
ATAAGGGTATATCGGAGGGT

Product: isoaspartyl dipeptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 391; Mature: 391

Protein sequence:

>391_residues
MITIIKNGYVYSPKFLGKKDILIASSNIEGVYDSLDIPKEFGEIKVIDAKENIVTPGFIDSHVHLIGGGGEGGFSTTTPE
IQLSHIISSGITTVVGCLGTDGICRSMEALLAKAKGLEEDGITTYIYTGSYSIPVNNITGCSKSDIMLIDKVIGVGEIAL
SDHRSSQPSYEDFVKICAEGRVGGLLANKAGVIHVHIGSGKKGIDYLFKVIKDTEIPASQIIPTHMGRSEDLFNQGIQYM
KKGGVIDLTTSSDPDFLEEGEIKASSGLKRILDSGLDIERVHFSSDGQGSLPRFNEKREYVGLGIGSVHSLYREFKDCVV
KEKIKIEDALKVVTSNVADYLMLNNKGHIEKEKDADIVILDKENLEILHVICKGKHLVEDGKVLKKGTFEG

Sequences:

>Translated_391_residues
MITIIKNGYVYSPKFLGKKDILIASSNIEGVYDSLDIPKEFGEIKVIDAKENIVTPGFIDSHVHLIGGGGEGGFSTTTPE
IQLSHIISSGITTVVGCLGTDGICRSMEALLAKAKGLEEDGITTYIYTGSYSIPVNNITGCSKSDIMLIDKVIGVGEIAL
SDHRSSQPSYEDFVKICAEGRVGGLLANKAGVIHVHIGSGKKGIDYLFKVIKDTEIPASQIIPTHMGRSEDLFNQGIQYM
KKGGVIDLTTSSDPDFLEEGEIKASSGLKRILDSGLDIERVHFSSDGQGSLPRFNEKREYVGLGIGSVHSLYREFKDCVV
KEKIKIEDALKVVTSNVADYLMLNNKGHIEKEKDADIVILDKENLEILHVICKGKHLVEDGKVLKKGTFEG
>Mature_391_residues
MITIIKNGYVYSPKFLGKKDILIASSNIEGVYDSLDIPKEFGEIKVIDAKENIVTPGFIDSHVHLIGGGGEGGFSTTTPE
IQLSHIISSGITTVVGCLGTDGICRSMEALLAKAKGLEEDGITTYIYTGSYSIPVNNITGCSKSDIMLIDKVIGVGEIAL
SDHRSSQPSYEDFVKICAEGRVGGLLANKAGVIHVHIGSGKKGIDYLFKVIKDTEIPASQIIPTHMGRSEDLFNQGIQYM
KKGGVIDLTTSSDPDFLEEGEIKASSGLKRILDSGLDIERVHFSSDGQGSLPRFNEKREYVGLGIGSVHSLYREFKDCVV
KEKIKIEDALKVVTSNVADYLMLNNKGHIEKEKDADIVILDKENLEILHVICKGKHLVEDGKVLKKGTFEG

Specific function: Catalyzes the hydrolytic cleavage of a subset of L- isoaspartyl (L-beta-aspartyl) dipeptides. Used to degrade proteins damaged by L-isoaspartyl residues formation. The best substrate for the enzyme reported thus far is iso-Asp-Leu [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M38 family [H]

Homologues:

Organism=Escherichia coli, GI1790784, Length=390, Percent_Identity=40, Blast_Score=297, Evalue=7e-82,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006680
- InterPro:   IPR011059
- InterPro:   IPR010229 [H]

Pfam domain/function: PF01979 Amidohydro_1 [H]

EC number: 3.4.19.- [C]

Molecular weight: Translated: 42433; Mature: 42433

Theoretical pI: Translated: 5.78; Mature: 5.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITIIKNGYVYSPKFLGKKDILIASSNIEGVYDSLDIPKEFGEIKVIDAKENIVTPGFID
CEEEEECCEEECCCCCCCCEEEEEECCCCCCHHCCCCCHHCCCEEEEECCCCCCCCCEEC
SHVHLIGGGGEGGFSTTTPEIQLSHIISSGITTVVGCLGTDGICRSMEALLAKAKGLEED
CEEEEEECCCCCCCCCCCCCEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCC
GITTYIYTGSYSIPVNNITGCSKSDIMLIDKVIGVGEIALSDHRSSQPSYEDFVKICAEG
CCEEEEEECEEEECCCCCCCCCCCCEEEEEHHHCCCCEEECCCCCCCCCHHHHHHHHHCC
RVGGLLANKAGVIHVHIGSGKKGIDYLFKVIKDTEIPASQIIPTHMGRSEDLFNQGIQYM
CCCEEEECCCCEEEEEECCCCCHHHHHHHHHHCCCCCHHHCCHHCCCCCHHHHHHHHHHH
KKGGVIDLTTSSDPDFLEEGEIKASSGLKRILDSGLDIERVHFSSDGQGSLPRFNEKREY
HCCCEEEEECCCCCCCHHCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCE
VGLGIGSVHSLYREFKDCVVKEKIKIEDALKVVTSNVADYLMLNNKGHIEKEKDADIVIL
EECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCEEEE
DKENLEILHVICKGKHLVEDGKVLKKGTFEG
ECCCCEEEEEECCCCEEECCCCEECCCCCCC
>Mature Secondary Structure
MITIIKNGYVYSPKFLGKKDILIASSNIEGVYDSLDIPKEFGEIKVIDAKENIVTPGFID
CEEEEECCEEECCCCCCCCEEEEEECCCCCCHHCCCCCHHCCCEEEEECCCCCCCCCEEC
SHVHLIGGGGEGGFSTTTPEIQLSHIISSGITTVVGCLGTDGICRSMEALLAKAKGLEED
CEEEEEECCCCCCCCCCCCCEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCC
GITTYIYTGSYSIPVNNITGCSKSDIMLIDKVIGVGEIALSDHRSSQPSYEDFVKICAEG
CCEEEEEECEEEECCCCCCCCCCCCEEEEEHHHCCCCEEECCCCCCCCCHHHHHHHHHCC
RVGGLLANKAGVIHVHIGSGKKGIDYLFKVIKDTEIPASQIIPTHMGRSEDLFNQGIQYM
CCCEEEECCCCEEEEEECCCCCHHHHHHHHHHCCCCCHHHCCHHCCCCCHHHHHHHHHHH
KKGGVIDLTTSSDPDFLEEGEIKASSGLKRILDSGLDIERVHFSSDGQGSLPRFNEKREY
HCCCEEEEECCCCCCCHHCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCE
VGLGIGSVHSLYREFKDCVVKEKIKIEDALKVVTSNVADYLMLNNKGHIEKEKDADIVIL
EECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCEEEE
DKENLEILHVICKGKHLVEDGKVLKKGTFEG
ECCCCEEEEEECCCCEEECCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7876157; 7610040; 9278503 [H]