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The map label for this gene is 226950847

Identifier: 226950847

GI number: 226950847

Start: 3904029

End: 3904352

Strand: Reverse

Name: 226950847

Synonym: CLM_3859

Alternate gene names: NA

Gene position: 3904352-3904029 (Counterclockwise)

Preceding gene: 226950848

Following gene: 226950846

Centisome position: 93.96

GC content: 27.16

Gene sequence:

>324_bases
ATGGCAGATAAAAAGAAGGTAGTTATAAATCTTCCCAATACACTTTATAATGAAATAAATGAAATAATAAAGAAAGATTC
CCAAAAAAGAAGTGAATTTTTTAGGGAAGCTATAATACTATATATTGAGGAGAGAAAAAAGCAAATAAAAATGGATGAAA
TGAAAAAAGGTTATATAGAAATGGCAAATATAAATATAGACTATGCAGAACAGGGATTTGAACAAGATGTAAAAGATTTA
AAAAACTATGAAGCTATGCTTTCGGAGAGTGATTTTCCAAATGACACAACAGATAGTAAAAAGAGGAGATATATTTTATG
CTGA

Upstream 100 bases:

>100_bases
TAATACATAATTGTATTAAAATAAACTTTGACATTGAAATTCCTAAAACTCTATAATTAAATTATAGGTATTACATAGCC
TTATTAGGAGGTATTATTTT

Downstream 100 bases:

>100_bases
TCTAAGTCCTGTAGTAGGTTCAGAGCAAGGTGGAATCAGACCGGTTATAGTTATACAAAATAATATAGGGAATAAATATA
GTCCCACAGTAATAATTGCA

Product: hypothetical protein

Products: NA

Alternate protein names: CopG Family Transcriptional Regulator; Helix-Turn-Helix Domain Protein Copg Family; Antitoxin EndoAI

Number of amino acids: Translated: 107; Mature: 106

Protein sequence:

>107_residues
MADKKKVVINLPNTLYNEINEIIKKDSQKRSEFFREAIILYIEERKKQIKMDEMKKGYIEMANINIDYAEQGFEQDVKDL
KNYEAMLSESDFPNDTTDSKKRRYILC

Sequences:

>Translated_107_residues
MADKKKVVINLPNTLYNEINEIIKKDSQKRSEFFREAIILYIEERKKQIKMDEMKKGYIEMANINIDYAEQGFEQDVKDL
KNYEAMLSESDFPNDTTDSKKRRYILC
>Mature_106_residues
ADKKKVVINLPNTLYNEINEIIKKDSQKRSEFFREAIILYIEERKKQIKMDEMKKGYIEMANINIDYAEQGFEQDVKDLK
NYEAMLSESDFPNDTTDSKKRRYILC

Specific function: Unknown

COG id: COG0864

COG function: function code K; Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12796; Mature: 12665

Theoretical pI: Translated: 5.34; Mature: 5.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADKKKVVINLPNTLYNEINEIIKKDSQKRSEFFREAIILYIEERKKQIKMDEMKKGYIE
CCCCCEEEEECCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCEE
MANINIDYAEQGFEQDVKDLKNYEAMLSESDFPNDTTDSKKRRYILC
HCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCC
>Mature Secondary Structure 
ADKKKVVINLPNTLYNEINEIIKKDSQKRSEFFREAIILYIEERKKQIKMDEMKKGYIE
CCCCEEEEECCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCEE
MANINIDYAEQGFEQDVKDLKNYEAMLSESDFPNDTTDSKKRRYILC
HCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA