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The map label for this gene is 226950838

Identifier: 226950838

GI number: 226950838

Start: 3895752

End: 3897047

Strand: Reverse

Name: 226950838

Synonym: CLM_3850

Alternate gene names: NA

Gene position: 3897047-3895752 (Counterclockwise)

Preceding gene: 226950839

Following gene: 226950837

Centisome position: 93.79

GC content: 27.55

Gene sequence:

>1296_bases
ATGGACATATTACTAATTACATTAAAGGCGGTAGCCTATCTCTTGATAGAGCCTTATTCAGTAATAGTTTTATTATTGTT
ATCATTGATTTTATATAGAAAAAATAGAAAGACTATCATAATGCAAAAAATGATAATAGGCCAAAAGGTAACTACAGCTT
TTGAATTAACAATATCTGAAGTAGTATTAGGAATATTTGCAGGAACTGTGGCTAGTTTAATTATGTCCTATTTAGGAATA
TTTTTTGGTGAAGATTCAGCAATTTATTTAATATTTTTAATATCTATGTTTTTTATGATATTTAATCCCAGATTTATATG
CTTTTCTTATTCTGGAGCTGCATTGGGAATTATTAGCTTAATACTTTTAAATATGGCTAAATTATTAAATATGCCACAAT
TAAATTTTGTTAATATAGATATACCGGCCTTAATGTCAATGGTTGCTATATTACACTTAGTTGAGGGTATATTAGTTATG
ATAGATGGAGATAGAGGATATGTTCCTGTTTTTACAAATAGAGATGATAAGATAATAGGAGGATTTGTACTCCAAAGATA
TTGGATACTGCCAATAGCTTTTATGCTTATGCTTAATAACCAAGCTCTTTCAAATACTAGTCAAGGTGGAGTACCTATGC
CTAATTGGTGGCCTTTACTAAAATCAGGTTTACCATTAAGTGTACTTAATGCAGCTATTATGGGGTTGACATCCTTTTAT
GGAATAATTGGCTATAATGCCGTTACTTTTACCAAAACTAGAAAAGAAAAAAAATTCATATCAGGACTATATATAATAAT
ATATAGTTTAATACTTTTTATGCTTTCAAGATTAGCAGTTATGAATACATTACTTAAAGTAATTGTATTAATTTTTGCTC
CAGTAGGTCACGAGGCTATGTTATATATACAAAAATATTTTGAATTAAAGGGAGAACCTAGATATATAAGCACAGAAGAA
GGTATTATGGTATTAGATGTAGCAAAAGATTCTGTAGCAAATAAAATGGGTATAAAAAGTGGAGATTTATTATTACAGGT
AAATGACAAAGAGATAGATAGTGAGGAAGATATAGTAAAATCTATAGGGCAAATGTATGGACATATATCATTTAAGATAA
AAAATGATGTAGGAAGATTAAAAACTGTAAATTATCGAATGTTAACTTCTTACGAAAAGTTAGGTATTGTATTTGTACCT
AAAAATGTACCTAAAAATACATCCGTAATAAAAGTTAAAAGTGAAAAATTTCAAGACATATTAGAAAAAATTAAAAACAA
AGATAAGGATGAATAA

Upstream 100 bases:

>100_bases
AAGATAAGATAATATTGTATTTGATCTTTATATTTTTATATAGATGGTTTAGTTAGACTTTCTAACTAAACCATAGTTAT
GGAGAGGGGAATTTTTTTTA

Downstream 100 bases:

>100_bases
GATGAACCAATTTAAGGTAATTTCAAAATTTAATCCTACAGGAGATCAACCTAAAGCTATAAAATCTATTGCTAAAGGCA
TAGAAAAAAGAGAAAAATTT

Product: hypothetical protein

Products: NA

Alternate protein names: C-Terminal PDZ Domain-Containing Protein; PDZ/DHR/GLGF Domain-Containing Protein; Pological Determinant; Serine Protease; Trypsin-Like Serine Protease; Pdz/Dhr/Glgf Domain Protein; Membrane Spanning Protein

Number of amino acids: Translated: 431; Mature: 431

Protein sequence:

>431_residues
MDILLITLKAVAYLLIEPYSVIVLLLLSLILYRKNRKTIIMQKMIIGQKVTTAFELTISEVVLGIFAGTVASLIMSYLGI
FFGEDSAIYLIFLISMFFMIFNPRFICFSYSGAALGIISLILLNMAKLLNMPQLNFVNIDIPALMSMVAILHLVEGILVM
IDGDRGYVPVFTNRDDKIIGGFVLQRYWILPIAFMLMLNNQALSNTSQGGVPMPNWWPLLKSGLPLSVLNAAIMGLTSFY
GIIGYNAVTFTKTRKEKKFISGLYIIIYSLILFMLSRLAVMNTLLKVIVLIFAPVGHEAMLYIQKYFELKGEPRYISTEE
GIMVLDVAKDSVANKMGIKSGDLLLQVNDKEIDSEEDIVKSIGQMYGHISFKIKNDVGRLKTVNYRMLTSYEKLGIVFVP
KNVPKNTSVIKVKSEKFQDILEKIKNKDKDE

Sequences:

>Translated_431_residues
MDILLITLKAVAYLLIEPYSVIVLLLLSLILYRKNRKTIIMQKMIIGQKVTTAFELTISEVVLGIFAGTVASLIMSYLGI
FFGEDSAIYLIFLISMFFMIFNPRFICFSYSGAALGIISLILLNMAKLLNMPQLNFVNIDIPALMSMVAILHLVEGILVM
IDGDRGYVPVFTNRDDKIIGGFVLQRYWILPIAFMLMLNNQALSNTSQGGVPMPNWWPLLKSGLPLSVLNAAIMGLTSFY
GIIGYNAVTFTKTRKEKKFISGLYIIIYSLILFMLSRLAVMNTLLKVIVLIFAPVGHEAMLYIQKYFELKGEPRYISTEE
GIMVLDVAKDSVANKMGIKSGDLLLQVNDKEIDSEEDIVKSIGQMYGHISFKIKNDVGRLKTVNYRMLTSYEKLGIVFVP
KNVPKNTSVIKVKSEKFQDILEKIKNKDKDE
>Mature_431_residues
MDILLITLKAVAYLLIEPYSVIVLLLLSLILYRKNRKTIIMQKMIIGQKVTTAFELTISEVVLGIFAGTVASLIMSYLGI
FFGEDSAIYLIFLISMFFMIFNPRFICFSYSGAALGIISLILLNMAKLLNMPQLNFVNIDIPALMSMVAILHLVEGILVM
IDGDRGYVPVFTNRDDKIIGGFVLQRYWILPIAFMLMLNNQALSNTSQGGVPMPNWWPLLKSGLPLSVLNAAIMGLTSFY
GIIGYNAVTFTKTRKEKKFISGLYIIIYSLILFMLSRLAVMNTLLKVIVLIFAPVGHEAMLYIQKYFELKGEPRYISTEE
GIMVLDVAKDSVANKMGIKSGDLLLQVNDKEIDSEEDIVKSIGQMYGHISFKIKNDVGRLKTVNYRMLTSYEKLGIVFVP
KNVPKNTSVIKVKSEKFQDILEKIKNKDKDE

Specific function: Unknown

COG id: COG0265

COG function: function code O; Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48532; Mature: 48532

Theoretical pI: Translated: 9.67; Mature: 9.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDILLITLKAVAYLLIEPYSVIVLLLLSLILYRKNRKTIIMQKMIIGQKVTTAFELTISE
CCEEEEHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCHHHHHHHHHHHHH
VVLGIFAGTVASLIMSYLGIFFGEDSAIYLIFLISMFFMIFNPRFICFSYSGAALGIISL
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHH
ILLNMAKLLNMPQLNFVNIDIPALMSMVAILHLVEGILVMIDGDRGYVPVFTNRDDKIIG
HHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHCCEEEEEECCCCEEEEEECCCCCHHH
GFVLQRYWILPIAFMLMLNNQALSNTSQGGVPMPNWWPLLKSGLPLSVLNAAIMGLTSFY
HHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHH
GIIGYNAVTFTKTRKEKKFISGLYIIIYSLILFMLSRLAVMNTLLKVIVLIFAPVGHEAM
HHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
LYIQKYFELKGEPRYISTEEGIMVLDVAKDSVANKMGIKSGDLLLQVNDKEIDSEEDIVK
HHHHHHHHCCCCCCEEECCCCEEEEEECHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHH
SIGQMYGHISFKIKNDVGRLKTVNYRMLTSYEKLGIVFVPKNVPKNTSVIKVKSEKFQDI
HHHHHHCEEEEEEECCCCCEEECCHHHHCCHHHCCEEEECCCCCCCCCEEEECHHHHHHH
LEKIKNKDKDE
HHHHHCCCCCC
>Mature Secondary Structure
MDILLITLKAVAYLLIEPYSVIVLLLLSLILYRKNRKTIIMQKMIIGQKVTTAFELTISE
CCEEEEHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCHHHHHHHHHHHHH
VVLGIFAGTVASLIMSYLGIFFGEDSAIYLIFLISMFFMIFNPRFICFSYSGAALGIISL
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHH
ILLNMAKLLNMPQLNFVNIDIPALMSMVAILHLVEGILVMIDGDRGYVPVFTNRDDKIIG
HHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHCCEEEEEECCCCEEEEEECCCCCHHH
GFVLQRYWILPIAFMLMLNNQALSNTSQGGVPMPNWWPLLKSGLPLSVLNAAIMGLTSFY
HHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHH
GIIGYNAVTFTKTRKEKKFISGLYIIIYSLILFMLSRLAVMNTLLKVIVLIFAPVGHEAM
HHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
LYIQKYFELKGEPRYISTEEGIMVLDVAKDSVANKMGIKSGDLLLQVNDKEIDSEEDIVK
HHHHHHHHCCCCCCEEECCCCEEEEEECHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHH
SIGQMYGHISFKIKNDVGRLKTVNYRMLTSYEKLGIVFVPKNVPKNTSVIKVKSEKFQDI
HHHHHHCEEEEEEECCCCCEEECCHHHHCCHHHCCEEEECCCCCCCCCEEEECHHHHHHH
LEKIKNKDKDE
HHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA