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The map label for this gene is pyrK [H]

Identifier: 226950665

GI number: 226950665

Start: 3688961

End: 3689716

Strand: Reverse

Name: pyrK [H]

Synonym: CLM_3649

Alternate gene names: 226950665

Gene position: 3689716-3688961 (Counterclockwise)

Preceding gene: 226950666

Following gene: 226950664

Centisome position: 88.8

GC content: 30.42

Gene sequence:

>756_bases
GTGTGTAAAATAAACTCTAAAACTTTTAAAGTAAAGGTAATAGAAAATAAAAGTATATCAACAGGTATATTTAAAATGAC
CTTAGAAGGTGCTTTTAAAGGGAAGCCAGGACAGTTTTATATGATAAGAGCTTGGCAAGATGAGCCTATTTTATGGAGAC
CTATAAGTATACATGATATAAATGATAATTCTATAGAATTTTTATATAAATTAGAAGGAAGAGGAACTAAAATCTTATCT
AAAATAAAATCAGAAGAAGAAGTTGAGATAATGGGACCCTTAGGGAACGGATTTGATTTAGAGAACATAAAGGGGAAAAT
AGCTATAGTAACTGGTGGTATAGGAATAGCTCCTATGAATTATTTGATAAAAAGTATGAAAAATATAAATATGGATATTT
ATGCAGGCTTTAGAGATGAGGTTTATTGCATCGAAAATTTTAATAATTTAGTGGATAAGGTAGTTGTAGTTACAGAGGAT
GGTAGTTCTGGAGAAAAAGGATATGTAACAGATTATTTTCATCCAGAAGATTATGATTTGGTTTTGTGCTGTGGCCCAGA
AATAATGATGAATAAAGTTATATTAATGTGTAGGGAGAAGAATATTCCTTTATACGTATCTATGGAAAAAAGAATGGCTT
GTGGTATAGGGGCATGTCTTGTGTGTACTTGTAAAACTAAATTTGGTAATAAAAGAACTTGCAAGGATGGTCCCGTATTT
AAAGGAGAGGACATTCTTTTGAAAGGAGATATATAA

Upstream 100 bases:

>100_bases
GTGTATTAGTAGTTGCTTCTTATCTAAAAAGAATAGGGTATTGGACTTAGTAGCTATGGGATAAATATATTTTTGTAGTA
TTAGATTACTAGAAAGAGTG

Downstream 100 bases:

>100_bases
TGCTTCAAGTAAATTTATGTGGTAAGATTTTTAAAAATCCTATTATAGCTGCATCTGGAACTTTTGGATTTGGAGAAGAA
TATGGGGAATTTTATGATGT

Product: dihydroorotate dehydrogenase electron transfer subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 251; Mature: 251

Protein sequence:

>251_residues
MCKINSKTFKVKVIENKSISTGIFKMTLEGAFKGKPGQFYMIRAWQDEPILWRPISIHDINDNSIEFLYKLEGRGTKILS
KIKSEEEVEIMGPLGNGFDLENIKGKIAIVTGGIGIAPMNYLIKSMKNINMDIYAGFRDEVYCIENFNNLVDKVVVVTED
GSSGEKGYVTDYFHPEDYDLVLCCGPEIMMNKVILMCREKNIPLYVSMEKRMACGIGACLVCTCKTKFGNKRTCKDGPVF
KGEDILLKGDI

Sequences:

>Translated_251_residues
MCKINSKTFKVKVIENKSISTGIFKMTLEGAFKGKPGQFYMIRAWQDEPILWRPISIHDINDNSIEFLYKLEGRGTKILS
KIKSEEEVEIMGPLGNGFDLENIKGKIAIVTGGIGIAPMNYLIKSMKNINMDIYAGFRDEVYCIENFNNLVDKVVVVTED
GSSGEKGYVTDYFHPEDYDLVLCCGPEIMMNKVILMCREKNIPLYVSMEKRMACGIGACLVCTCKTKFGNKRTCKDGPVF
KGEDILLKGDI
>Mature_251_residues
MCKINSKTFKVKVIENKSISTGIFKMTLEGAFKGKPGQFYMIRAWQDEPILWRPISIHDINDNSIEFLYKLEGRGTKILS
KIKSEEEVEIMGPLGNGFDLENIKGKIAIVTGGIGIAPMNYLIKSMKNINMDIYAGFRDEVYCIENFNNLVDKVVVVTED
GSSGEKGYVTDYFHPEDYDLVLCCGPEIMMNKVILMCREKNIPLYVSMEKRMACGIGACLVCTCKTKFGNKRTCKDGPVF
KGEDILLKGDI

Specific function: Is responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the pyrD subunit to the ultimate electron acceptor NAD(+) [H]

COG id: COG0543

COG function: function code HC; 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding FR-type domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012165
- InterPro:   IPR019480
- InterPro:   IPR017927
- InterPro:   IPR008333
- InterPro:   IPR001433
- InterPro:   IPR017938 [H]

Pfam domain/function: PF10418 DHODB_Fe-S_bind; PF00970 FAD_binding_6; PF00175 NAD_binding_1 [H]

EC number: NA

Molecular weight: Translated: 28220; Mature: 28220

Theoretical pI: Translated: 7.57; Mature: 7.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.0 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
8.8 %Cys+Met (Translated Protein)
4.0 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
8.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCKINSKTFKVKVIENKSISTGIFKMTLEGAFKGKPGQFYMIRAWQDEPILWRPISIHDI
CCEECCEEEEEEEEECCCCCCEEEEEEEEECCCCCCCCEEEEEEECCCCEEEEEEEEEEC
NDNSIEFLYKLEGRGTKILSKIKSEEEVEIMGPLGNGFDLENIKGKIAIVTGGIGIAPMN
CCCCEEEEEEECCCCHHHHHHHCCCCCEEEECCCCCCEECCCCCEEEEEEECCCCHHHHH
YLIKSMKNINMDIYAGFRDEVYCIENFNNLVDKVVVVTEDGSSGEKGYVTDYFHPEDYDL
HHHHHHHCCCEEEEECCCCCEEEEHHHHCCCEEEEEEEECCCCCCCCEEEECCCCCCCEE
VLCCGPEIMMNKVILMCREKNIPLYVSMEKRMACGIGACLVCTCKTKFGNKRTCKDGPVF
EEEECCHHHHCEEEEEEECCCCCEEEEECCHHCCCCCEEEEEEEECCCCCCCCCCCCCEE
KGEDILLKGDI
CCCEEEEECCC
>Mature Secondary Structure
MCKINSKTFKVKVIENKSISTGIFKMTLEGAFKGKPGQFYMIRAWQDEPILWRPISIHDI
CCEECCEEEEEEEEECCCCCCEEEEEEEEECCCCCCCCEEEEEEECCCCEEEEEEEEEEC
NDNSIEFLYKLEGRGTKILSKIKSEEEVEIMGPLGNGFDLENIKGKIAIVTGGIGIAPMN
CCCCEEEEEEECCCCHHHHHHHCCCCCEEEECCCCCCEECCCCCEEEEEEECCCCHHHHH
YLIKSMKNINMDIYAGFRDEVYCIENFNNLVDKVVVVTEDGSSGEKGYVTDYFHPEDYDL
HHHHHHHCCCEEEEECCCCCEEEEHHHHCCCEEEEEEEECCCCCCCCEEEECCCCCCCEE
VLCCGPEIMMNKVILMCREKNIPLYVSMEKRMACGIGACLVCTCKTKFGNKRTCKDGPVF
EEEECCHHHHCEEEEEEECCCCCEEEEECCHHCCCCCEEEEEEEECCCCCCCCCCCCCEE
KGEDILLKGDI
CCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11466286 [H]