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The map label for this gene is ycjN [C]

Identifier: 226950648

GI number: 226950648

Start: 3671412

End: 3672647

Strand: Reverse

Name: ycjN [C]

Synonym: CLM_3632

Alternate gene names: 226950648

Gene position: 3672647-3671412 (Counterclockwise)

Preceding gene: 226950650

Following gene: 226950646

Centisome position: 88.39

GC content: 19.9

Gene sequence:

>1236_bases
TTGAAATTTAAAAAAATAATATGTTTAATTCTTATATTAATATGTCCAATAACTTTTGCTTCTTGTAAAAAGGAAAATAA
AAACAACAATAAAGAACTAAATATGTATATAGATATTAAAGATGAAAATTCTTTAAATATATTAAAAATTATCATGGAAG
AATATAAAAAATCTAATGAAGATGTAAAAATAAATATAAATAATGCATTAGGTAGTAATGTGGAAGAAGAATTAAAAAAA
GAAAAATCTCCTGACTTAATATTTGTATCAAGAAATGAAATGATAAAGCTATCTCAAAAGGGACTTTTAAATAATATGGA
AACAAGTTATGAAAAGAATAATATTACTAAAGATTATTATAATGTTTTCAATAGTTATGGTAGATTTAAAGATAAATATT
ATGGATTACCTATTATACCTTATACTATAGAGGTTCTATATAATATTGATGCTTTAAAGAAATTAAATATAGAGGAACCT
AAAAATATAAATGATATAAAAAATGTTATGAAGCAATTAAAAACTTCATCTACTAAAGTACCTGTTATGTTACCAAATGA
TTTAGATATAAATTCAATTATATTTTCAATAATATCAAATAATACAACAAATTCTATGGAATTAGAAAATATTTATGATA
AAGGAAAGAAAGAATATCAGACGTTAAAAAATATGCAGGAACCTTTTAATATTATAAATAATATGGTTAAAGATAATATA
TTAGATAAAAATTCTTTTGAGACAGGAAAGGAAGTTACATTAGAAAAATTTAATAATGGAGATATTCCTATAATAATAAG
TACTTCTTATTATAATAATCAAATAAAAAGTCCTAATATAAAATCTGTTAAACAATTATATAATGTAGATAAATTAAATA
ATACAGAACCTGTAATTATAAATTCTATAATGTGTTTGCCGCTAAAAGCTAAAAACTCAGAGGAAACAAATAATTTTATA
GATTTTACTTTTAGTGAAAAAACTCAAAAATATTTATTAAAAAAGGGTTTTATAACAGGAAATAAAAAAATTAATAAAGA
AAAAGAAGGAGATCTTACTAAACTGAACAAAACTACTGTAGAAAAGCTAAATAATCTAAATGAAAATAGTATATTGGTAT
TATATAATTTACCAAATACTTTTAAGTCTAGTATATCATCTTCTATTGATAAGATATTAAACAATGAGTATACGGGAAAA
GAATGGAATAAAATTGTAGAAGATAATTTAAAATAA

Upstream 100 bases:

>100_bases
ATAATTCACCTCTAATTAATTATATGAAGCTATTATATATTTAATTAATTTGTACAAAATAAAAATAAAAGAATATACTT
CCGATGGAGGTGAAGTGCTA

Downstream 100 bases:

>100_bases
AGCATTACTAATTAAGGTAGCAATATAATAAGCACTTAAATTAGATAGATTTAAGTGCTTATTAATTACTAATTTTCTGA
ATGTGATTTATTGTTGCAAC

Product: extracellular solute-binding protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 411; Mature: 411

Protein sequence:

>411_residues
MKFKKIICLILILICPITFASCKKENKNNNKELNMYIDIKDENSLNILKIIMEEYKKSNEDVKININNALGSNVEEELKK
EKSPDLIFVSRNEMIKLSQKGLLNNMETSYEKNNITKDYYNVFNSYGRFKDKYYGLPIIPYTIEVLYNIDALKKLNIEEP
KNINDIKNVMKQLKTSSTKVPVMLPNDLDINSIIFSIISNNTTNSMELENIYDKGKKEYQTLKNMQEPFNIINNMVKDNI
LDKNSFETGKEVTLEKFNNGDIPIIISTSYYNNQIKSPNIKSVKQLYNVDKLNNTEPVIINSIMCLPLKAKNSEETNNFI
DFTFSEKTQKYLLKKGFITGNKKINKEKEGDLTKLNKTTVEKLNNLNENSILVLYNLPNTFKSSISSSIDKILNNEYTGK
EWNKIVEDNLK

Sequences:

>Translated_411_residues
MKFKKIICLILILICPITFASCKKENKNNNKELNMYIDIKDENSLNILKIIMEEYKKSNEDVKININNALGSNVEEELKK
EKSPDLIFVSRNEMIKLSQKGLLNNMETSYEKNNITKDYYNVFNSYGRFKDKYYGLPIIPYTIEVLYNIDALKKLNIEEP
KNINDIKNVMKQLKTSSTKVPVMLPNDLDINSIIFSIISNNTTNSMELENIYDKGKKEYQTLKNMQEPFNIINNMVKDNI
LDKNSFETGKEVTLEKFNNGDIPIIISTSYYNNQIKSPNIKSVKQLYNVDKLNNTEPVIINSIMCLPLKAKNSEETNNFI
DFTFSEKTQKYLLKKGFITGNKKINKEKEGDLTKLNKTTVEKLNNLNENSILVLYNLPNTFKSSISSSIDKILNNEYTGK
EWNKIVEDNLK
>Mature_411_residues
MKFKKIICLILILICPITFASCKKENKNNNKELNMYIDIKDENSLNILKIIMEEYKKSNEDVKININNALGSNVEEELKK
EKSPDLIFVSRNEMIKLSQKGLLNNMETSYEKNNITKDYYNVFNSYGRFKDKYYGLPIIPYTIEVLYNIDALKKLNIEEP
KNINDIKNVMKQLKTSSTKVPVMLPNDLDINSIIFSIISNNTTNSMELENIYDKGKKEYQTLKNMQEPFNIINNMVKDNI
LDKNSFETGKEVTLEKFNNGDIPIIISTSYYNNQIKSPNIKSVKQLYNVDKLNNTEPVIINSIMCLPLKAKNSEETNNFI
DFTFSEKTQKYLLKKGFITGNKKINKEKEGDLTKLNKTTVEKLNNLNENSILVLYNLPNTFKSSISSSIDKILNNEYTGK
EWNKIVEDNLK

Specific function: Probably Part Of The Binding-Protein-Dependent Transport System Ycjnop. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasmic (Potential) [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47593; Mature: 47593

Theoretical pI: Translated: 9.13; Mature: 9.13

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFKKIICLILILICPITFASCKKENKNNNKELNMYIDIKDENSLNILKIIMEEYKKSNE
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHCCCC
DVKININNALGSNVEEELKKEKSPDLIFVSRNEMIKLSQKGLLNNMETSYEKNNITKDYY
CEEEEECCHHCCCHHHHHHHCCCCCEEEEECCCEEHHHHHHHHHHHHHHHHHCCCCHHHH
NVFNSYGRFKDKYYGLPIIPYTIEVLYNIDALKKLNIEEPKNINDIKNVMKQLKTSSTKV
HHHHHHCCHHHHCCCCCCHHHHHHHHHCHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCC
PVMLPNDLDINSIIFSIISNNTTNSMELENIYDKGKKEYQTLKNMQEPFNIINNMVKDNI
CEECCCCCCHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
LDKNSFETGKEVTLEKFNNGDIPIIISTSYYNNQIKSPNIKSVKQLYNVDKLNNTEPVII
CCCCCCCCCCCEEHEECCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEE
NSIMCLPLKAKNSEETNNFIDFTFSEKTQKYLLKKGFITGNKKINKEKEGDLTKLNKTTV
EEEEEEEECCCCCCCCCCEEEEEECHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHH
EKLNNLNENSILVLYNLPNTFKSSISSSIDKILNNEYTGKEWNKIVEDNLK
HHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCC
>Mature Secondary Structure
MKFKKIICLILILICPITFASCKKENKNNNKELNMYIDIKDENSLNILKIIMEEYKKSNE
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHCCCC
DVKININNALGSNVEEELKKEKSPDLIFVSRNEMIKLSQKGLLNNMETSYEKNNITKDYY
CEEEEECCHHCCCHHHHHHHCCCCCEEEEECCCEEHHHHHHHHHHHHHHHHHCCCCHHHH
NVFNSYGRFKDKYYGLPIIPYTIEVLYNIDALKKLNIEEPKNINDIKNVMKQLKTSSTKV
HHHHHHCCHHHHCCCCCCHHHHHHHHHCHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCC
PVMLPNDLDINSIIFSIISNNTTNSMELENIYDKGKKEYQTLKNMQEPFNIINNMVKDNI
CEECCCCCCHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
LDKNSFETGKEVTLEKFNNGDIPIIISTSYYNNQIKSPNIKSVKQLYNVDKLNNTEPVII
CCCCCCCCCCCEEHEECCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEE
NSIMCLPLKAKNSEETNNFIDFTFSEKTQKYLLKKGFITGNKKINKEKEGDLTKLNKTTV
EEEEEEEECCCCCCCCCCEEEEEECHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHH
EKLNNLNENSILVLYNLPNTFKSSISSSIDKILNNEYTGKEWNKIVEDNLK
HHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA