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The map label for this gene is 226950637

Identifier: 226950637

GI number: 226950637

Start: 3659850

End: 3660314

Strand: Reverse

Name: 226950637

Synonym: CLM_3621

Alternate gene names: NA

Gene position: 3660314-3659850 (Counterclockwise)

Preceding gene: 226950638

Following gene: 226950636

Centisome position: 88.09

GC content: 26.02

Gene sequence:

>465_bases
ATGGATAAGCATACTAGCAAAATAGAGAAACTTATAGATAAATGTTTTAAAGATGTAGATTTAATAATTCATTTAGGAGA
CTTTACTTCCCCAAGGGTTTTAGAGAAAATAAAGAAAAAGAAAAAAGTTATAGGCGTTTGGGGAAATAATGATAGAAATG
GATTAAGACAAGAGTTAAAGGAAAAAGAAATAGTTATTTTAAATGGATATAAAGTAGGTTTGTTTCATGGACATGGAACA
GAAAAAAACACATTAGATAGAATTTATAGTATTTTTAAAGATGACAATGTAGATATCATATTATTTGGACATAGCCATCA
ACCTATGATAAAAACTAAAAATAAAACTCTTATTATAAATCCAGGATCGCCAAGCAAAAAAATAAGAGAAAGATGGTTTT
CTTATGTGGTTTTAAGTCTAAAGAAAGAGAAAATAGAAGCTAAAATTTGTTTTTACAATAAGTAA

Upstream 100 bases:

>100_bases
CGGAAAAGAAATTTATTTGTATTCTGATTTTTGTAACCATTGTGGTAAAGAACAGTAGGAAGGTGATATTATCAAAATAG
GTGTTATATCAGATACTCAT

Downstream 100 bases:

>100_bases
GTAAAATATTACAATATTTCCGTGGAAATAATTAAATATTTGTAGTATTTTACAGAAATTTTTTAAAAGGATAATAGGGC
TAGAGTTTAATAAATATTAA

Product: phosphodiesterase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 154; Mature: 154

Protein sequence:

>154_residues
MDKHTSKIEKLIDKCFKDVDLIIHLGDFTSPRVLEKIKKKKKVIGVWGNNDRNGLRQELKEKEIVILNGYKVGLFHGHGT
EKNTLDRIYSIFKDDNVDIILFGHSHQPMIKTKNKTLIINPGSPSKKIRERWFSYVVLSLKKEKIEAKICFYNK

Sequences:

>Translated_154_residues
MDKHTSKIEKLIDKCFKDVDLIIHLGDFTSPRVLEKIKKKKKVIGVWGNNDRNGLRQELKEKEIVILNGYKVGLFHGHGT
EKNTLDRIYSIFKDDNVDIILFGHSHQPMIKTKNKTLIINPGSPSKKIRERWFSYVVLSLKKEKIEAKICFYNK
>Mature_154_residues
MDKHTSKIEKLIDKCFKDVDLIIHLGDFTSPRVLEKIKKKKKVIGVWGNNDRNGLRQELKEKEIVILNGYKVGLFHGHGT
EKNTLDRIYSIFKDDNVDIILFGHSHQPMIKTKNKTLIINPGSPSKKIRERWFSYVVLSLKKEKIEAKICFYNK

Specific function: Unknown

COG id: COG0622

COG function: function code R; Predicted phosphoesterase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the metallophosphoesterase superfamily. YfcE family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004843
- InterPro:   IPR020935
- InterPro:   IPR000979 [H]

Pfam domain/function: PF00149 Metallophos [H]

EC number: NA

Molecular weight: Translated: 17964; Mature: 17964

Theoretical pI: Translated: 10.39; Mature: 10.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKHTSKIEKLIDKCFKDVDLIIHLGDFTSPRVLEKIKKKKKVIGVWGNNDRNGLRQELK
CCCHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHCEEEEEECCCCCHHHHHHHC
EKEIVILNGYKVGLFHGHGTEKNTLDRIYSIFKDDNVDIILFGHSHQPMIKTKNKTLIIN
CCCEEEECCEEEEEEECCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCEEECCCEEEEE
PGSPSKKIRERWFSYVVLSLKKEKIEAKICFYNK
CCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEECC
>Mature Secondary Structure
MDKHTSKIEKLIDKCFKDVDLIIHLGDFTSPRVLEKIKKKKKVIGVWGNNDRNGLRQELK
CCCHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHCEEEEEECCCCCHHHHHHHC
EKEIVILNGYKVGLFHGHGTEKNTLDRIYSIFKDDNVDIILFGHSHQPMIKTKNKTLIIN
CCCEEEECCEEEEEEECCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCEEECCCEEEEE
PGSPSKKIRERWFSYVVLSLKKEKIEAKICFYNK
CCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]