Click here to switch to the map view.

The map label for this gene is 226950575

Identifier: 226950575

GI number: 226950575

Start: 3589140

End: 3589412

Strand: Reverse

Name: 226950575

Synonym: CLM_3558

Alternate gene names: NA

Gene position: 3589412-3589140 (Counterclockwise)

Preceding gene: 226950576

Following gene: 226950574

Centisome position: 86.38

GC content: 31.5

Gene sequence:

>273_bases
ATGACAAAGACTCCTTTAAAAAAAGTAATAAAATCCAAAATTAAGGCTAACAAGGAGCTTACTAAAGAAGAAAAATTAAG
AGAAAAAATGAAGTACGAAATAGCAATAGAGCTCGGCCTACAAGATAAAGTAGACCAATTAGGATGGGGAGGACTAACCT
CAGAAGAAACCGGAAGAATAGGGGGTATAATGACCAAAAGAAAAAAAGAGCTTAAACTTCCTAAAAATGAAGAAATATTA
ATGATGAGTGAAATTAAAAATAGTATGCAATAG

Upstream 100 bases:

>100_bases
AAAGAAGAGGCTGGTATTTCAGTCTCTTTTTATAATAGTATAAAATACCCCTACAAGGCAAATAATAGTAATAATAGATT
ATTTGTATGGAGGGATTTAA

Downstream 100 bases:

>100_bases
AAGCACTAATCTATTGACTTACCTAATAAAAGTATATAATATTTATTAGGTAAGTATATTTTTATAAATTAAGGAGAGTT
TAGGAATGGAATGTTATAGA

Product: small acid-soluble spore protein

Products: NA

Alternate protein names: Small Acid-Soluble Spore Protein Alpha/Beta Type; Small Acid-Soluble Spore Protein Alpha/Beta Family; Small Acid-Soluble Spore Protein Beta; Small Acid-Soluble Spore Protein Alpha/Beta Family Protein

Number of amino acids: Translated: 90; Mature: 89

Protein sequence:

>90_residues
MTKTPLKKVIKSKIKANKELTKEEKLREKMKYEIAIELGLQDKVDQLGWGGLTSEETGRIGGIMTKRKKELKLPKNEEIL
MMSEIKNSMQ

Sequences:

>Translated_90_residues
MTKTPLKKVIKSKIKANKELTKEEKLREKMKYEIAIELGLQDKVDQLGWGGLTSEETGRIGGIMTKRKKELKLPKNEEIL
MMSEIKNSMQ
>Mature_89_residues
TKTPLKKVIKSKIKANKELTKEEKLREKMKYEIAIELGLQDKVDQLGWGGLTSEETGRIGGIMTKRKKELKLPKNEEILM
MSEIKNSMQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10363; Mature: 10231

Theoretical pI: Translated: 10.42; Mature: 10.42

Prosite motif: PS00304 SASP_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.7 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKTPLKKVIKSKIKANKELTKEEKLREKMKYEIAIELGLQDKVDQLGWGGLTSEETGRI
CCCCHHHHHHHHHHHCCHHCHHHHHHHHHHHHHHHEEECCHHHHHHCCCCCCCCCCCCCC
GGIMTKRKKELKLPKNEEILMMSEIKNSMQ
CCHHHHHHHHCCCCCCCCEEEHHHHHHHCC
>Mature Secondary Structure 
TKTPLKKVIKSKIKANKELTKEEKLREKMKYEIAIELGLQDKVDQLGWGGLTSEETGRI
CCCHHHHHHHHHHHCCHHCHHHHHHHHHHHHHHHEEECCHHHHHHCCCCCCCCCCCCCC
GGIMTKRKKELKLPKNEEILMMSEIKNSMQ
CCHHHHHHHHCCCCCCCCEEEHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA