Click here to switch to the map view.

The map label for this gene is hslO [H]

Identifier: 226950573

GI number: 226950573

Start: 3587386

End: 3588276

Strand: Reverse

Name: hslO [H]

Synonym: CLM_3556

Alternate gene names: 226950573

Gene position: 3588276-3587386 (Counterclockwise)

Preceding gene: 226950574

Following gene: 226950572

Centisome position: 86.35

GC content: 32.32

Gene sequence:

>891_bases
ATGAAAGATAAATTAGTTAAGGCTATTGCTAAGGATGGACAGGTAAGAATAATAGGAGCAATAACAACAGAATTAGTTAA
TGAAGGAGTAAGATTACATAATTGTGCCCCAACAGCAGCTGCTGCTTTAGGAAGAATGCTTACAGCAGGAGCATTAATGG
GAACTACATTAAAATCAGAGAAGGACACTTTAACATTACAAATTCATGGTGGTGGTATTGCTAAGGGAGTTGTAGTTACA
TCATATGCAGATGGGCATGTTAAAGGTTATATAGGTAATCCTACAGCAGATATAGAGCCAAATAGTAAGGGGAAATTAGA
TGTAAGTGGAATTATAGGTAAGAATGGTAACTTATTAGTTATAAGAGACATGGGATTGAAAGAACCTTATATAGGGCAGG
TGCCTATATATACTGGAGAAATAGGAGAAGATTTAGCTTATTATTATACAGTATCAGAACAAACACCTTCAGCGGTAGGT
TTAGGAGTATTAGTAGATAAAGATTTATCTATAAAATCAGCTGGAGGGTTTATAATACAAATGATGCCTGGAGCTGATGA
AATGTTAGCAGATTTAATAAGTTATAGATTAGAAGAAATACCTTCTATTACAGAAATGATTTCAAAGGGAATGACAATAG
AGGAAATATTAGAATACATATTTGAAGATATGGATTTAAATATATTAGAAAGCATAGTGCCAGAATATAGATGTGATTGT
TCACGAGAAAAGGTAGAAAGAGCTTTGGCGAGTATAGGACAAAAGGATTTAAAAGAAATATATGATGAGGTCAAAGAGGA
AGAACTGAAATGTCATTTTTGTAATAAAGCATATGCTTTTAGTCATGATGAGATTGGGAATATTTTAGAAAGTTATTATA
ATGAAAAATAA

Upstream 100 bases:

>100_bases
AATTATGAGAATAAAAAAATCCAAGAAAAGACAGAAAGAATAGTTTATATATTGACTAAATAGTTTTCTAATTAAAATGA
TGAAGGTTAGGTGAATTTAC

Downstream 100 bases:

>100_bases
TATTGATTAATTATTAGTTGACATTAGCGACCAATTATAATATAATAATTATTGTAATTGGTGAGGGCGCATAGCTCAGC
TGGGAGAGCATCTGCCTTAC

Product: Hsp33-like chaperonin

Products: NA

Alternate protein names: Heat shock protein 33 homolog; HSP33 [H]

Number of amino acids: Translated: 296; Mature: 296

Protein sequence:

>296_residues
MKDKLVKAIAKDGQVRIIGAITTELVNEGVRLHNCAPTAAAALGRMLTAGALMGTTLKSEKDTLTLQIHGGGIAKGVVVT
SYADGHVKGYIGNPTADIEPNSKGKLDVSGIIGKNGNLLVIRDMGLKEPYIGQVPIYTGEIGEDLAYYYTVSEQTPSAVG
LGVLVDKDLSIKSAGGFIIQMMPGADEMLADLISYRLEEIPSITEMISKGMTIEEILEYIFEDMDLNILESIVPEYRCDC
SREKVERALASIGQKDLKEIYDEVKEEELKCHFCNKAYAFSHDEIGNILESYYNEK

Sequences:

>Translated_296_residues
MKDKLVKAIAKDGQVRIIGAITTELVNEGVRLHNCAPTAAAALGRMLTAGALMGTTLKSEKDTLTLQIHGGGIAKGVVVT
SYADGHVKGYIGNPTADIEPNSKGKLDVSGIIGKNGNLLVIRDMGLKEPYIGQVPIYTGEIGEDLAYYYTVSEQTPSAVG
LGVLVDKDLSIKSAGGFIIQMMPGADEMLADLISYRLEEIPSITEMISKGMTIEEILEYIFEDMDLNILESIVPEYRCDC
SREKVERALASIGQKDLKEIYDEVKEEELKCHFCNKAYAFSHDEIGNILESYYNEK
>Mature_296_residues
MKDKLVKAIAKDGQVRIIGAITTELVNEGVRLHNCAPTAAAALGRMLTAGALMGTTLKSEKDTLTLQIHGGGIAKGVVVT
SYADGHVKGYIGNPTADIEPNSKGKLDVSGIIGKNGNLLVIRDMGLKEPYIGQVPIYTGEIGEDLAYYYTVSEQTPSAVG
LGVLVDKDLSIKSAGGFIIQMMPGADEMLADLISYRLEEIPSITEMISKGMTIEEILEYIFEDMDLNILESIVPEYRCDC
SREKVERALASIGQKDLKEIYDEVKEEELKCHFCNKAYAFSHDEIGNILESYYNEK

Specific function: Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress [H]

COG id: COG1281

COG function: function code O; Disulfide bond chaperones of the HSP33 family

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HSP33 family [H]

Homologues:

Organism=Escherichia coli, GI87082260, Length=291, Percent_Identity=23.0240549828179, Blast_Score=75, Evalue=4e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000397
- InterPro:   IPR016154
- InterPro:   IPR016153 [H]

Pfam domain/function: PF01430 HSP33 [H]

EC number: NA

Molecular weight: Translated: 32308; Mature: 32308

Theoretical pI: Translated: 4.53; Mature: 4.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDKLVKAIAKDGQVRIIGAITTELVNEGVRLHNCAPTAAAALGRMLTAGALMGTTLKSE
CCHHHHHHHHCCCCEEEEHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHHCCCCCC
KDTLTLQIHGGGIAKGVVVTSYADGHVKGYIGNPTADIEPNSKGKLDVSGIIGKNGNLLV
CCEEEEEEECCCEECCEEEEEECCCCEEEEECCCCCCCCCCCCCCEEEEEEECCCCCEEE
IRDMGLKEPYIGQVPIYTGEIGEDLAYYYTVSEQTPSAVGLGVLVDKDLSIKSAGGFIIQ
EECCCCCCCCCCCCCEEECCCCCCEEEEEEECCCCCCHHEEEEEEECCCCEECCCCEEEE
MMPGADEMLADLISYRLEEIPSITEMISKGMTIEEILEYIFEDMDLNILESIVPEYRCDC
ECCCHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCC
SREKVERALASIGQKDLKEIYDEVKEEELKCHFCNKAYAFSHDEIGNILESYYNEK
CHHHHHHHHHHCCHHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKDKLVKAIAKDGQVRIIGAITTELVNEGVRLHNCAPTAAAALGRMLTAGALMGTTLKSE
CCHHHHHHHHCCCCEEEEHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHHCCCCCC
KDTLTLQIHGGGIAKGVVVTSYADGHVKGYIGNPTADIEPNSKGKLDVSGIIGKNGNLLV
CCEEEEEEECCCEECCEEEEEECCCCEEEEECCCCCCCCCCCCCCEEEEEEECCCCCEEE
IRDMGLKEPYIGQVPIYTGEIGEDLAYYYTVSEQTPSAVGLGVLVDKDLSIKSAGGFIIQ
EECCCCCCCCCCCCCEEECCCCCCEEEEEEECCCCCCHHEEEEEEECCCCEECCCCEEEE
MMPGADEMLADLISYRLEEIPSITEMISKGMTIEEILEYIFEDMDLNILESIVPEYRCDC
ECCCHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCC
SREKVERALASIGQKDLKEIYDEVKEEELKCHFCNKAYAFSHDEIGNILESYYNEK
CHHHHHHHHHHCCHHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA