Click here to switch to the map view.

The map label for this gene is 226950171

Identifier: 226950171

GI number: 226950171

Start: 3124195

End: 3124311

Strand: Reverse

Name: 226950171

Synonym: CLM_3125

Alternate gene names: NA

Gene position: 3124311-3124195 (Counterclockwise)

Preceding gene: 226950172

Following gene: 226950170

Centisome position: 75.19

GC content: 23.08

Gene sequence:

>117_bases
ATGAAAGTTATGGGAAGAAAAATGAAGAAAAGAAGAGTGGAAAAAACAGTAAATAATATGTTAGATAACGTAGAAAAAGG
TTTCAAAAAAATTACTAAAGAAATGAACAAAAAATAA

Upstream 100 bases:

>100_bases
TTGCAAAATTAATAAAAAACAGGTAAATATTTATAAAGTTCAAATAGCATATAAAAAAAGAAAATGCACAAAATAAGCTT
ATAACTTCTTCTGAAGGGAG

Downstream 100 bases:

>100_bases
ATAAAGAGATTAAATACTATAAAAATATTTCATTACCAAGTAAATAGTTATTAATAATTATTTACTTGGTATATTTATAT
CATAAAATAATTATTAAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 38; Mature: 38

Protein sequence:

>38_residues
MKVMGRKMKKRRVEKTVNNMLDNVEKGFKKITKEMNKK

Sequences:

>Translated_38_residues
MKVMGRKMKKRRVEKTVNNMLDNVEKGFKKITKEMNKK
>Mature_38_residues
MKVMGRKMKKRRVEKTVNNMLDNVEKGFKKITKEMNKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 4598; Mature: 4598

Theoretical pI: Translated: 11.40; Mature: 11.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
13.2 %Met     (Translated Protein)
13.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
13.2 %Met     (Mature Protein)
13.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVMGRKMKKRRVEKTVNNMLDNVEKGFKKITKEMNKK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKVMGRKMKKRRVEKTVNNMLDNVEKGFKKITKEMNKK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA