| Definition | Clostridium botulinum A2 str. Kyoto chromosome, complete genome. |
|---|---|
| Accession | NC_012563 |
| Length | 4,155,278 |
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The map label for this gene is 226950169
Identifier: 226950169
GI number: 226950169
Start: 3122641
End: 3123282
Strand: Reverse
Name: 226950169
Synonym: CLM_3123
Alternate gene names: NA
Gene position: 3123282-3122641 (Counterclockwise)
Preceding gene: 226950170
Following gene: 226950168
Centisome position: 75.16
GC content: 26.95
Gene sequence:
>642_bases TTGGAAAAATTGGCAATATTTGATGTAGACTATACGCTTACAAAACAAGAAACACTTATACAGTTTTATAAATTTATGCT TAAAAAGAAACCTTCTCTTATATTTCATGCTCCTAAGATAGTTATATCTGGGCTTTTGTATGCTTTGAAAATATTTCAAG CAGGAAAAGCTAAAGAAATATTTATAGGATTTATAGATGGTATCACAGAGGATGAAATGCAAAGTTATGTAAAAGAATTT TATGATAAAAAACTAAGCAAAATATTATACAAAGATGCTATAGATACTATGAGAAAATTGAAAAATGAAGGCTATAAAGT ATACCTTATATCTGCTTCTGCAGAATTTTATTTAAAAGAGCTCTATAATATAAAAGAAGTAGACAAAGTAATAGGAACTA TATTTACATTAGAAGAAGGGGCTTATAAGAGAAAAATAATAGGAGAAAACTGTAAAGGAGAAGAAAAGGTAAGAAGGCTT ATGGAAGTCCTAAAAGAAGAAAATATAGAAGTAGATTTTAAGGAATCATATATGTTTTCAGATTCTCTAGCGGATTTACC TTTATTTAAATTAGTAGGAAAGCCTTATCTTATAAATGCAAAAAAGAAGTATAACAATATAGAAGTACTTAATTGGAAGT AG
Upstream 100 bases:
>100_bases AAGTGAAAAGTCTAGTATAAATAAAAAAGTGAATATATTATAAAAAATCACAAAATATATAGTATAATATAAGAATACAA CTTATAGAAGAGGTGGTATT
Downstream 100 bases:
>100_bases AATAAAATTTAATTCAAATTAAGTTCACTGATTGTGAATTTTAATTGAAACTAATTTAAGTGCTTTATAATACTAATGCA CAATATGAGGATTGTGATAT
Product: HAD superfamily hydrolase
Products: NA
Alternate protein names: HAD-Superfamily Subfamily IB Hydrolase TIGR; HAD-Superfamily Subfamily IB Hydrolase; Phosphoserine Phosphatase; Hydrolase; HAD-Superfamily Hydrolase; Phosphoserine Phosphatase SerB; Phosphoserine Phosphatase Family Protein; HAD-Superfamily Hydrolase Subfamily IB; Phosphoserine Phosphatase-Like Protein; HAD Hydrolase Family IB
Number of amino acids: Translated: 213; Mature: 213
Protein sequence:
>213_residues MEKLAIFDVDYTLTKQETLIQFYKFMLKKKPSLIFHAPKIVISGLLYALKIFQAGKAKEIFIGFIDGITEDEMQSYVKEF YDKKLSKILYKDAIDTMRKLKNEGYKVYLISASAEFYLKELYNIKEVDKVIGTIFTLEEGAYKRKIIGENCKGEEKVRRL MEVLKEENIEVDFKESYMFSDSLADLPLFKLVGKPYLINAKKKYNNIEVLNWK
Sequences:
>Translated_213_residues MEKLAIFDVDYTLTKQETLIQFYKFMLKKKPSLIFHAPKIVISGLLYALKIFQAGKAKEIFIGFIDGITEDEMQSYVKEF YDKKLSKILYKDAIDTMRKLKNEGYKVYLISASAEFYLKELYNIKEVDKVIGTIFTLEEGAYKRKIIGENCKGEEKVRRL MEVLKEENIEVDFKESYMFSDSLADLPLFKLVGKPYLINAKKKYNNIEVLNWK >Mature_213_residues MEKLAIFDVDYTLTKQETLIQFYKFMLKKKPSLIFHAPKIVISGLLYALKIFQAGKAKEIFIGFIDGITEDEMQSYVKEF YDKKLSKILYKDAIDTMRKLKNEGYKVYLISASAEFYLKELYNIKEVDKVIGTIFTLEEGAYKRKIIGENCKGEEKVRRL MEVLKEENIEVDFKESYMFSDSLADLPLFKLVGKPYLINAKKKYNNIEVLNWK
Specific function: Unknown
COG id: COG0560
COG function: function code E; Phosphoserine phosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24989; Mature: 24989
Theoretical pI: Translated: 9.35; Mature: 9.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKLAIFDVDYTLTKQETLIQFYKFMLKKKPSLIFHAPKIVISGLLYALKIFQAGKAKEI CCCEEEEECCCEECHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHCCCCCEE FIGFIDGITEDEMQSYVKEFYDKKLSKILYKDAIDTMRKLKNEGYKVYLISASAEFYLKE EEEHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHH LYNIKEVDKVIGTIFTLEEGAYKRKIIGENCKGEEKVRRLMEVLKEENIEVDFKESYMFS HHCHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEHHHEEEC DSLADLPLFKLVGKPYLINAKKKYNNIEVLNWK CCCCCCHHHHHHCCCEEEECHHCCCCEEEEECC >Mature Secondary Structure MEKLAIFDVDYTLTKQETLIQFYKFMLKKKPSLIFHAPKIVISGLLYALKIFQAGKAKEI CCCEEEEECCCEECHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHCCCCCEE FIGFIDGITEDEMQSYVKEFYDKKLSKILYKDAIDTMRKLKNEGYKVYLISASAEFYLKE EEEHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHH LYNIKEVDKVIGTIFTLEEGAYKRKIIGENCKGEEKVRRLMEVLKEENIEVDFKESYMFS HHCHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEHHHEEEC DSLADLPLFKLVGKPYLINAKKKYNNIEVLNWK CCCCCCHHHHHHCCCEEEECHHCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA