| Definition | Clostridium botulinum A2 str. Kyoto chromosome, complete genome. |
|---|---|
| Accession | NC_012563 |
| Length | 4,155,278 |
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The map label for this gene is cheB [H]
Identifier: 226950162
GI number: 226950162
Start: 3114227
End: 3115291
Strand: Reverse
Name: cheB [H]
Synonym: CLM_3116
Alternate gene names: 226950162
Gene position: 3115291-3114227 (Counterclockwise)
Preceding gene: 226950163
Following gene: 226950161
Centisome position: 74.97
GC content: 30.89
Gene sequence:
>1065_bases TTGAATAAAATTAAAGTTTTAGTAGTAGATGACTCGGCTTTAATGAGAAAAATAGTATCAGATATGATAAATGAAGAAAA TGATTTAGAAGTAATAGATACAGCTAGAAATGGAGAAGATCTTTTAGAAAAATTAAAGAGGATAAAGCCAAATATAATAA CATTAGATGTGGAAATGCCTAAAATGGATGGAATAGAAGCTTTAATAAATATTAAAAGGATTTATAAAGATATACCGGTT ATTATGCTTAGTAGTTTATCTAAAAAAGGTGCAGGATTAACTATGGATTGTCTTCAAAAGGGAGCCTTTGATTTTGTACC TAAGCCATCAGGGGCTATATCTTTAGATATAAATAAAGTAAAAGAAGAATTAGTAGAAAAAATAAGAGCTGCTACTAATG CTATAAAAAATAATTATACTTCAGATATTTTAAAAACAGACGAAAAAATTAATGTTAAAAAAGTGGAAGAAAAAAGATAC CCTATAAAAAATACTGTTTCTTCAAAAAAAGTAGAAGCTGTAGTTATAGGAGCTTCAACAGGAGGCCCTAAAGCATTATA TTCAGTAATAACAGCTTTTCCAGAAAAAATAGATGTGCCAGTATTTGTAGTTCAACATATGCCAAAAGGATTTACCAAAG CTTTTTCAGAAAGACTAAATGCTAATAGTAAATTAAAAGTTGTAGAAGGGCAAGATGGACAAACTATAGAGAAAGATACT GTTTATGTAGCCCCGGGGGGCTTTCATATGGAAGTAGGAAAGGATAGAAAAATACATCTAAACATAGAACCAACCCTATG GGGAGTGAGACCAGCTGTAGATAAGTTATTTAAATCAGCATCTGAAGTTTATGGCAGCAACTTAATAAGTGTTGTATTAA CTGGTATGGGAAGAGATGGCGCAGATGGTACGGCTTATATAAAAGATAGAGGAGGCATAACCATATCAGAAGATAAATCT ACCTGTACTATATACGGTATGCCAAAAGCAACTTACGAAACAGGAAAGGTGGATTTTGTAGTACCACTTTATAATGTTAA AGATACAATACTGAAAAATATTTAA
Upstream 100 bases:
>100_bases GGAAGAACTATGATATTTGATACCTCCACAGGAAAAGTATATATAAAGACTGTAGGCTTAGGAACTAAAGAAATATAGAT AAGTTATTGGAGTGATTCAT
Downstream 100 bases:
>100_bases TTTTGGAGGTAATTATGGATTTAGAATATTTCGAAGAGTGGGTATTAAAGGATTTTGGAATAAATTTAAAAGCATATAAA CAAAATCAGCTTCAAAGAAG
Product: protein-glutamate methylesterase CheB
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 354; Mature: 354
Protein sequence:
>354_residues MNKIKVLVVDDSALMRKIVSDMINEENDLEVIDTARNGEDLLEKLKRIKPNIITLDVEMPKMDGIEALINIKRIYKDIPV IMLSSLSKKGAGLTMDCLQKGAFDFVPKPSGAISLDINKVKEELVEKIRAATNAIKNNYTSDILKTDEKINVKKVEEKRY PIKNTVSSKKVEAVVIGASTGGPKALYSVITAFPEKIDVPVFVVQHMPKGFTKAFSERLNANSKLKVVEGQDGQTIEKDT VYVAPGGFHMEVGKDRKIHLNIEPTLWGVRPAVDKLFKSASEVYGSNLISVVLTGMGRDGADGTAYIKDRGGITISEDKS TCTIYGMPKATYETGKVDFVVPLYNVKDTILKNI
Sequences:
>Translated_354_residues MNKIKVLVVDDSALMRKIVSDMINEENDLEVIDTARNGEDLLEKLKRIKPNIITLDVEMPKMDGIEALINIKRIYKDIPV IMLSSLSKKGAGLTMDCLQKGAFDFVPKPSGAISLDINKVKEELVEKIRAATNAIKNNYTSDILKTDEKINVKKVEEKRY PIKNTVSSKKVEAVVIGASTGGPKALYSVITAFPEKIDVPVFVVQHMPKGFTKAFSERLNANSKLKVVEGQDGQTIEKDT VYVAPGGFHMEVGKDRKIHLNIEPTLWGVRPAVDKLFKSASEVYGSNLISVVLTGMGRDGADGTAYIKDRGGITISEDKS TCTIYGMPKATYETGKVDFVVPLYNVKDTILKNI >Mature_354_residues MNKIKVLVVDDSALMRKIVSDMINEENDLEVIDTARNGEDLLEKLKRIKPNIITLDVEMPKMDGIEALINIKRIYKDIPV IMLSSLSKKGAGLTMDCLQKGAFDFVPKPSGAISLDINKVKEELVEKIRAATNAIKNNYTSDILKTDEKINVKKVEEKRY PIKNTVSSKKVEAVVIGASTGGPKALYSVITAFPEKIDVPVFVVQHMPKGFTKAFSERLNANSKLKVVEGQDGQTIEKDT VYVAPGGFHMEVGKDRKIHLNIEPTLWGVRPAVDKLFKSASEVYGSNLISVVLTGMGRDGADGTAYIKDRGGITISEDKS TCTIYGMPKATYETGKVDFVVPLYNVKDTILKNI
Specific function: Involved in the modulation of the chemotaxis system; catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR [H]
COG id: COG2201
COG function: function code NT; Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1788192, Length=358, Percent_Identity=37.1508379888268, Blast_Score=234, Evalue=8e-63,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR008248 - InterPro: IPR000673 - InterPro: IPR001789 [H]
Pfam domain/function: PF01339 CheB_methylest; PF00072 Response_reg [H]
EC number: =3.1.1.61 [H]
Molecular weight: Translated: 39010; Mature: 39010
Theoretical pI: Translated: 9.27; Mature: 9.27
Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50122 CHEB
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKIKVLVVDDSALMRKIVSDMINEENDLEVIDTARNGEDLLEKLKRIKPNIITLDVEMP CCCEEEEEECCHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHCCCCEEEEEEECC KMDGIEALINIKRIYKDIPVIMLSSLSKKGAGLTMDCLQKGAFDFVPKPSGAISLDINKV CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCCCCCEEEEEHHHH KEELVEKIRAATNAIKNNYTSDILKTDEKINVKKVEEKRYPIKNTVSSKKVEAVVIGAST HHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCEEHHHHCCCCHHCCCCCCEEEEEEECCC GGPKALYSVITAFPEKIDVPVFVVQHMPKGFTKAFSERLNANSKLKVVEGQDGQTIEKDT CCHHHHHHHHHHCHHHCCCCEEEEHHCCCHHHHHHHHHHCCCCEEEEEECCCCCEEECCE VYVAPGGFHMEVGKDRKIHLNIEPTLWGVRPAVDKLFKSASEVYGSNLISVVLTGMGRDG EEECCCCEEEEECCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCHHEEHHHCCCCCCC ADGTAYIKDRGGITISEDKSTCTIYGMPKATYETGKVDFVVPLYNVKDTILKNI CCCEEEEECCCCEEEECCCCEEEEEECCCCCCCCCCEEEEEEECCCHHHHHHCC >Mature Secondary Structure MNKIKVLVVDDSALMRKIVSDMINEENDLEVIDTARNGEDLLEKLKRIKPNIITLDVEMP CCCEEEEEECCHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHCCCCEEEEEEECC KMDGIEALINIKRIYKDIPVIMLSSLSKKGAGLTMDCLQKGAFDFVPKPSGAISLDINKV CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCCCCCEEEEEHHHH KEELVEKIRAATNAIKNNYTSDILKTDEKINVKKVEEKRYPIKNTVSSKKVEAVVIGAST HHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCEEHHHHCCCCHHCCCCCCEEEEEEECCC GGPKALYSVITAFPEKIDVPVFVVQHMPKGFTKAFSERLNANSKLKVVEGQDGQTIEKDT CCHHHHHHHHHHCHHHCCCCEEEEHHCCCHHHHHHHHHHCCCCEEEEEECCCCCEEECCE VYVAPGGFHMEVGKDRKIHLNIEPTLWGVRPAVDKLFKSASEVYGSNLISVVLTGMGRDG EEECCCCEEEEECCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCHHEEHHHCCCCCCC ADGTAYIKDRGGITISEDKSTCTIYGMPKATYETGKVDFVVPLYNVKDTILKNI CCCEEEEECCCCEEEECCCCEEEEEECCCCCCCCCCEEEEEEECCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11466286 [H]