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The map label for this gene is pseI

Identifier: 226950132

GI number: 226950132

Start: 3084672

End: 3085724

Strand: Reverse

Name: pseI

Synonym: CLM_3086

Alternate gene names: NA

Gene position: 3085724-3084672 (Counterclockwise)

Preceding gene: 226950133

Following gene: 226950131

Centisome position: 74.26

GC content: 32.1

Gene sequence:

>1053_bases
ATGAACAATTTTATTAAAATAGGAAATAAAAAAATAGGTGAAGGTGAAAAAACTTTTATTATAGCAGAAATGTCAGCAAA
CCATCTTCAAAGTTTTGAAAGAGCAGTAGAAATAATAAAAAAAGCTAAAGAATCTGGAGCAGATGCTATAAAGCTTCAAA
CGTATACTCCAGATACTATAACTATAGATTGTAACAACGAATATTTTCAAATAAAACAAGGAACTATTTGGGATGGAACA
ACTTTATATAAGCTTTATAAAAAAGCATATACCCCTTGGGAATGGCAGCCAAAGCTAAAAAAAATAGCAGAGGATTTAGG
ATTAATTTGTTTTTCATCACCCTTTGACAAGACTTCAGTAGACTTTTTAGAGGATATGAATGTAGAAGCTTACAAAATAG
CTTCCTTTGAAATAACAGACATTCCTTTTATAGAATATATAGCATCAAAAGGAAAGCCTATAATAATGTCTACAGGTATA
GCAACTTTAGGTGATATAGAAGAGGCTATAAAAGCATGTCATAGAATGGGTAATTATGAAATAGTCCTTTTAAAATGCAC
TTCAGCTTATCCAGCACCACTAGAAGATATAAATTTAAAAACCATACCAAATATGAAAGAAACATTTAAAACAGTAGTAG
GACTTTCAGATCATACCTTGGGTCATTCAGTAGCTTTAGGAGCAGTAGCTCTAGGAGCTAAAATAGTAGAAAAACACTTT
ACCCTAAAAAGAGAGGATGGCGGCCCAGATGCGAAGTTTTCTATGGAACCTGAAGAATTTAAAGCCATGGTACAGGGCAT
AAGAGAAGTAGAAAAGGCATTGGGAAGTGTTACCTATGAACTTACAGAAAAACAAAGAAATAGTAGGGAACATTCTAGGT
CTTTATTTGTGGTAAAAGATATTAAAAAAGGAGAAGTATTCACGGAAGAAAATGTGAAGAGTATAAGGCCAGGGTTTGGT
ATGGAAACTAAATATATAAAGGATATTTTAGGTAAAAAGGCTACAATGAATTTAAATAAGGGAACTCCTTTGGAGTGGGA
AATAATTGATTAA

Upstream 100 bases:

>100_bases
ATTTTTTTATATTAGTGTTTATAATTAAGAAAAAAATGTTTTAAACGATAAATATAATAACGAATTTTAGATGATTATGT
AGATTACTTTGGAGGGGATT

Downstream 100 bases:

>100_bases
TATGAAGTAGTTAGACAAATTTAGATATATAAATTATTTTAAGGAGAATATTTTAATATATGAAAATATACTTAGTAACA
GGAGGAGCAGGGTTTATAGG

Product: pseudaminic acid synthase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 350; Mature: 350

Protein sequence:

>350_residues
MNNFIKIGNKKIGEGEKTFIIAEMSANHLQSFERAVEIIKKAKESGADAIKLQTYTPDTITIDCNNEYFQIKQGTIWDGT
TLYKLYKKAYTPWEWQPKLKKIAEDLGLICFSSPFDKTSVDFLEDMNVEAYKIASFEITDIPFIEYIASKGKPIIMSTGI
ATLGDIEEAIKACHRMGNYEIVLLKCTSAYPAPLEDINLKTIPNMKETFKTVVGLSDHTLGHSVALGAVALGAKIVEKHF
TLKREDGGPDAKFSMEPEEFKAMVQGIREVEKALGSVTYELTEKQRNSREHSRSLFVVKDIKKGEVFTEENVKSIRPGFG
METKYIKDILGKKATMNLNKGTPLEWEIID

Sequences:

>Translated_350_residues
MNNFIKIGNKKIGEGEKTFIIAEMSANHLQSFERAVEIIKKAKESGADAIKLQTYTPDTITIDCNNEYFQIKQGTIWDGT
TLYKLYKKAYTPWEWQPKLKKIAEDLGLICFSSPFDKTSVDFLEDMNVEAYKIASFEITDIPFIEYIASKGKPIIMSTGI
ATLGDIEEAIKACHRMGNYEIVLLKCTSAYPAPLEDINLKTIPNMKETFKTVVGLSDHTLGHSVALGAVALGAKIVEKHF
TLKREDGGPDAKFSMEPEEFKAMVQGIREVEKALGSVTYELTEKQRNSREHSRSLFVVKDIKKGEVFTEENVKSIRPGFG
METKYIKDILGKKATMNLNKGTPLEWEIID
>Mature_350_residues
MNNFIKIGNKKIGEGEKTFIIAEMSANHLQSFERAVEIIKKAKESGADAIKLQTYTPDTITIDCNNEYFQIKQGTIWDGT
TLYKLYKKAYTPWEWQPKLKKIAEDLGLICFSSPFDKTSVDFLEDMNVEAYKIASFEITDIPFIEYIASKGKPIIMSTGI
ATLGDIEEAIKACHRMGNYEIVLLKCTSAYPAPLEDINLKTIPNMKETFKTVVGLSDHTLGHSVALGAVALGAKIVEKHF
TLKREDGGPDAKFSMEPEEFKAMVQGIREVEKALGSVTYELTEKQRNSREHSRSLFVVKDIKKGEVFTEENVKSIRPGFG
METKYIKDILGKKATMNLNKGTPLEWEIID

Specific function: Unknown

COG id: COG2089

COG function: function code M; Sialic acid synthase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis spsE [H]

Homologues:

Organism=Homo sapiens, GI12056473, Length=345, Percent_Identity=29.5652173913043, Blast_Score=156, Evalue=3e-38,
Organism=Drosophila melanogaster, GI21357081, Length=257, Percent_Identity=31.1284046692607, Blast_Score=122, Evalue=3e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006190
- InterPro:   IPR013785
- InterPro:   IPR013132
- InterPro:   IPR013974 [H]

Pfam domain/function: PF03102 NeuB; PF08666 SAF [H]

EC number: NA

Molecular weight: Translated: 39373; Mature: 39373

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: PS50844 AFP_LIKE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNFIKIGNKKIGEGEKTFIIAEMSANHLQSFERAVEIIKKAKESGADAIKLQTYTPDTI
CCCCEECCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCEE
TIDCNNEYFQIKQGTIWDGTTLYKLYKKAYTPWEWQPKLKKIAEDLGLICFSSPFDKTSV
EEECCCCEEEEECCCEECCHHHHHHHHHHCCCCCCCHHHHHHHHHHCEEEECCCCCCCHH
DFLEDMNVEAYKIASFEITDIPFIEYIASKGKPIIMSTGIATLGDIEEAIKACHRMGNYE
HHHHCCCCCEEEEEEEEECCCHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHCCCEE
IVLLKCTSAYPAPLEDINLKTIPNMKETFKTVVGLSDHTLGHSVALGAVALGAKIVEKHF
EEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHC
TLKREDGGPDAKFSMEPEEFKAMVQGIREVEKALGSVTYELTEKQRNSREHSRSLFVVKD
EEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEE
IKKGEVFTEENVKSIRPGFGMETKYIKDILGKKATMNLNKGTPLEWEIID
CCCCCCCCCCCHHHCCCCCCCCHHHHHHHHCCCEEEECCCCCCCEEEECC
>Mature Secondary Structure
MNNFIKIGNKKIGEGEKTFIIAEMSANHLQSFERAVEIIKKAKESGADAIKLQTYTPDTI
CCCCEECCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCEE
TIDCNNEYFQIKQGTIWDGTTLYKLYKKAYTPWEWQPKLKKIAEDLGLICFSSPFDKTSV
EEECCCCEEEEECCCEECCHHHHHHHHHHCCCCCCCHHHHHHHHHHCEEEECCCCCCCHH
DFLEDMNVEAYKIASFEITDIPFIEYIASKGKPIIMSTGIATLGDIEEAIKACHRMGNYE
HHHHCCCCCEEEEEEEEECCCHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHCCCEE
IVLLKCTSAYPAPLEDINLKTIPNMKETFKTVVGLSDHTLGHSVALGAVALGAKIVEKHF
EEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHC
TLKREDGGPDAKFSMEPEEFKAMVQGIREVEKALGSVTYELTEKQRNSREHSRSLFVVKD
EEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEE
IKKGEVFTEENVKSIRPGFGMETKYIKDILGKKATMNLNKGTPLEWEIID
CCCCCCCCCCCHHHCCCCCCCCHHHHHHHHCCCEEEECCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]