Click here to switch to the map view.

The map label for this gene is 226950111

Identifier: 226950111

GI number: 226950111

Start: 3060887

End: 3061891

Strand: Reverse

Name: 226950111

Synonym: CLM_3065

Alternate gene names: NA

Gene position: 3061891-3060887 (Counterclockwise)

Preceding gene: 226950112

Following gene: 226950110

Centisome position: 73.69

GC content: 26.87

Gene sequence:

>1005_bases
GTGAAAAATAATGATTTTAATATAGTATTTTTGGGCGGCTCCATAACAGAAGGTACAGGAGCTACAGCTAAAGATAAAGC
TTATGTGCATATAGTAGGAGAATATTTTAAAAATTTATATGAAGATAAAAAAGTCAATATATATAATGCAGGCATTGGAG
GGACTGGTTCTAGATTTGGGCTTTTTAGATTAGAGAGAGATGTTATATGTCATAATCCAGATTTAGTTTTCTTTGAATTT
TCCGTTAATGATAGAATAGAAAATCCTTTTGATGCATCTATAACTACTGAAGGAGTAGTTAGAAAATTATTATATTTAAA
AAATCAACCTAAAATAATATTTTTAATAACTCCAAGTGAAATGGCAGATGCTTGTAGTTCTTTACATAAAAAAATAGCTT
ATTATTATGACATACTAGTTATAGATATACAAGATTATGTTTTCAAAGCAATTGGACAAGATAAATATACTTGGAGTCAT
ATATCTACGGATAATCTTCATCCTAATGATGTAGGTCATAAAATATATGGTGAGTATATAATAAAATCTATAGATAAAAA
TAAAGATTTTTATTTTAAAAAAAATAATTTAAAAGAAAAATCTTTAATGGGGTATGAATTTAAAAATCCTCAAATAGAAA
GCTATGAAAAGGCTATATTCTATGGTCATTGGCGAGAAGAAAATATGAATATACCTAAGAGAATAGAGCTTTCAGCAGTA
TCAGATGTATTTGGGGATTGTTTAGAATTTAATTTTAAAGGTAAATATATATCCGCACTAGCTATTGTAGGGAGAGAATG
TGGAATAGCAGAAATAAATTTAGATGGAGCATCAGCAATTTTAGATTTATATTCCGATACAGATAATTACTGTACTCCTA
TTTTAAATTTGAAGGATTTAAAGGATACAAAACATAAGCTTATAATAAAGGTTAATGAGAATAAAAATCCTAAAAGCAAA
GGGAATAAAATAAGCATAGGTAGTTTTTTAGTGGAAAATATGTAG

Upstream 100 bases:

>100_bases
TACAATGGTAAAAATAGCATTATATAAAGATAAAGAAATATTAAAAAATAAATTTATGTAATATATTAAGCTGATTTCTT
ATAAAAGTGTAGGTGATTAG

Downstream 100 bases:

>100_bases
ATAAGTACTATTATGAAATAGTAAAGTTTTATATAGAAAATAGAATGTATGTTTTAACTAATTTATATAGAAGCAATATA
TGAAAAACTTTAAAATAGAC

Product: lipase/acylhydrolase, GDSL family

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 334; Mature: 334

Protein sequence:

>334_residues
MKNNDFNIVFLGGSITEGTGATAKDKAYVHIVGEYFKNLYEDKKVNIYNAGIGGTGSRFGLFRLERDVICHNPDLVFFEF
SVNDRIENPFDASITTEGVVRKLLYLKNQPKIIFLITPSEMADACSSLHKKIAYYYDILVIDIQDYVFKAIGQDKYTWSH
ISTDNLHPNDVGHKIYGEYIIKSIDKNKDFYFKKNNLKEKSLMGYEFKNPQIESYEKAIFYGHWREENMNIPKRIELSAV
SDVFGDCLEFNFKGKYISALAIVGRECGIAEINLDGASAILDLYSDTDNYCTPILNLKDLKDTKHKLIIKVNENKNPKSK
GNKISIGSFLVENM

Sequences:

>Translated_334_residues
MKNNDFNIVFLGGSITEGTGATAKDKAYVHIVGEYFKNLYEDKKVNIYNAGIGGTGSRFGLFRLERDVICHNPDLVFFEF
SVNDRIENPFDASITTEGVVRKLLYLKNQPKIIFLITPSEMADACSSLHKKIAYYYDILVIDIQDYVFKAIGQDKYTWSH
ISTDNLHPNDVGHKIYGEYIIKSIDKNKDFYFKKNNLKEKSLMGYEFKNPQIESYEKAIFYGHWREENMNIPKRIELSAV
SDVFGDCLEFNFKGKYISALAIVGRECGIAEINLDGASAILDLYSDTDNYCTPILNLKDLKDTKHKLIIKVNENKNPKSK
GNKISIGSFLVENM
>Mature_334_residues
MKNNDFNIVFLGGSITEGTGATAKDKAYVHIVGEYFKNLYEDKKVNIYNAGIGGTGSRFGLFRLERDVICHNPDLVFFEF
SVNDRIENPFDASITTEGVVRKLLYLKNQPKIIFLITPSEMADACSSLHKKIAYYYDILVIDIQDYVFKAIGQDKYTWSH
ISTDNLHPNDVGHKIYGEYIIKSIDKNKDFYFKKNNLKEKSLMGYEFKNPQIESYEKAIFYGHWREENMNIPKRIELSAV
SDVFGDCLEFNFKGKYISALAIVGRECGIAEINLDGASAILDLYSDTDNYCTPILNLKDLKDTKHKLIIKVNENKNPKSK
GNKISIGSFLVENM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38112; Mature: 38112

Theoretical pI: Translated: 6.94; Mature: 6.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNNDFNIVFLGGSITEGTGATAKDKAYVHIVGEYFKNLYEDKKVNIYNAGIGGTGSRFG
CCCCCEEEEEECCCCCCCCCCCCCCCEEEEEHHHHHHHHHCCCCEEEEECCCCCCCCCEE
LFRLERDVICHNPDLVFFEFSVNDRIENPFDASITTEGVVRKLLYLKNQPKIIFLITPSE
EEEEECCEEECCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCHH
MADACSSLHKKIAYYYDILVIDIQDYVFKAIGQDKYTWSHISTDNLHPNDVGHKIYGEYI
HHHHHHHHHHHHHHEEEEEEEEHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHHHHH
IKSIDKNKDFYFKKNNLKEKSLMGYEFKNPQIESYEKAIFYGHWREENMNIPKRIELSAV
HHHHCCCCCEEEECCCCCCHHCCCEECCCCCHHCCCEEEEEEEEECCCCCCCCEEEHHHH
SDVFGDCLEFNFKGKYISALAIVGRECGIAEINLDGASAILDLYSDTDNYCTPILNLKDL
HHHHHHHHEECCCCCCEEEEEECCCCCCEEEEECCCHHHHHHHHCCCCCCCCCCCCCHHC
KDTKHKLIIKVNENKNPKSKGNKISIGSFLVENM
CCCCEEEEEEECCCCCCCCCCCEEEEHHHHCCCC
>Mature Secondary Structure
MKNNDFNIVFLGGSITEGTGATAKDKAYVHIVGEYFKNLYEDKKVNIYNAGIGGTGSRFG
CCCCCEEEEEECCCCCCCCCCCCCCCEEEEEHHHHHHHHHCCCCEEEEECCCCCCCCCEE
LFRLERDVICHNPDLVFFEFSVNDRIENPFDASITTEGVVRKLLYLKNQPKIIFLITPSE
EEEEECCEEECCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCHH
MADACSSLHKKIAYYYDILVIDIQDYVFKAIGQDKYTWSHISTDNLHPNDVGHKIYGEYI
HHHHHHHHHHHHHHEEEEEEEEHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHHHHH
IKSIDKNKDFYFKKNNLKEKSLMGYEFKNPQIESYEKAIFYGHWREENMNIPKRIELSAV
HHHHCCCCCEEEECCCCCCHHCCCEECCCCCHHCCCEEEEEEEEECCCCCCCCEEEHHHH
SDVFGDCLEFNFKGKYISALAIVGRECGIAEINLDGASAILDLYSDTDNYCTPILNLKDL
HHHHHHHHEECCCCCCEEEEEECCCCCCEEEEECCCHHHHHHHHCCCCCCCCCCCCCHHC
KDTKHKLIIKVNENKNPKSKGNKISIGSFLVENM
CCCCEEEEEEECCCCCCCCCCCEEEEHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA